Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A47:A20
Extra
PDB:
ATOM 1 O3' C A 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 2 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 3 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 4 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 5 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
ATOM 6 C5' G A 47 50.511 13.226 7.344 1.00 27.57 C
ATOM 7 C4' G A 47 50.812 13.962 8.624 1.00 29.08 C
ATOM 8 O4' G A 47 50.569 13.064 9.739 1.00 29.31 O
ATOM 9 C3' G A 47 52.273 14.374 8.758 1.00 30.82 C
ATOM 10 O3' G A 47 52.375 15.482 9.642 1.00 32.84 O
ATOM 11 C2' G A 47 52.912 13.141 9.386 1.00 30.98 C
ATOM 12 O2' G A 47 54.076 13.452 10.124 1.00 31.97 O
ATOM 13 C1' G A 47 51.799 12.687 10.327 1.00 30.06 C
ATOM 14 N9 G A 47 51.753 11.264 10.645 1.00 29.62 N
ATOM 15 C8 G A 47 52.135 10.206 9.856 1.00 30.04 C
ATOM 16 N7 G A 47 51.974 9.048 10.440 1.00 30.53 N
ATOM 17 C5 G A 47 51.453 9.364 11.688 1.00 29.28 C
ATOM 18 C6 G A 47 51.074 8.526 12.767 1.00 29.03 C
ATOM 19 O6 G A 47 51.121 7.290 12.839 1.00 29.13 O
ATOM 20 N1 G A 47 50.596 9.267 13.846 1.00 27.66 N
ATOM 21 C2 G A 47 50.494 10.634 13.883 1.00 27.16 C
ATOM 22 N2 G A 47 50.012 11.167 15.017 1.00 25.32 N
ATOM 23 N3 G A 47 50.841 11.424 12.884 1.00 27.98 N
ATOM 24 C4 G A 47 51.309 10.727 11.827 1.00 29.39 C
ATOM 25 P U A 48 53.149 16.806 9.171 1.00 35.03 P
ATOM 26 OP1 U A 48 53.283 16.745 7.693 1.00 35.08 O
ATOM 27 OP2 U A 48 54.358 16.968 10.015 1.00 35.47 O
ATOM 28 O5' U A 48 52.149 17.987 9.530 1.00 34.40 O
TER
ATOM 1 O3' U B 19 45.002 16.399 16.770 1.00 17.64 O
ATOM 2 P A B 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 3 OP1 A B 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 4 OP2 A B 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 5 O5' A B 20 45.845 14.182 17.543 1.00 15.88 O
ATOM 6 C5' A B 20 44.574 13.606 17.784 1.00 16.01 C
ATOM 7 C4' A B 20 44.666 12.105 17.704 1.00 16.47 C
ATOM 8 O4' A B 20 44.577 11.714 16.305 1.00 16.26 O
ATOM 9 C3' A B 20 46.000 11.553 18.184 1.00 15.70 C
ATOM 10 O3' A B 20 45.839 10.279 18.776 1.00 16.36 O
ATOM 11 C2' A B 20 46.862 11.552 16.923 1.00 16.37 C
ATOM 12 O2' A B 20 47.866 10.551 16.932 1.00 16.53 O
ATOM 13 C1' A B 20 45.830 11.242 15.841 1.00 16.64 C
ATOM 14 N9 A B 20 46.129 11.891 14.563 1.00 16.14 N
ATOM 15 C8 A B 20 45.893 13.195 14.208 1.00 16.52 C
ATOM 16 N7 A B 20 46.315 13.500 13.002 1.00 16.97 N
ATOM 17 C5 A B 20 46.861 12.316 12.530 1.00 16.87 C
ATOM 18 C6 A B 20 47.484 11.979 11.311 1.00 17.10 C
ATOM 19 N6 A B 20 47.689 12.850 10.316 1.00 17.38 N
ATOM 20 N1 A B 20 47.900 10.702 11.151 1.00 17.38 N
ATOM 21 C2 A B 20 47.708 9.836 12.153 1.00 18.03 C
ATOM 22 N3 A B 20 47.144 10.036 13.348 1.00 16.88 N
ATOM 23 C4 A B 20 46.739 11.311 13.474 1.00 15.96 C
ATOM 24 P U B 21 45.857 10.149 20.378 1.00 15.89 P
ATOM 25 OP1 U B 21 47.100 10.793 20.848 1.00 15.32 O
ATOM 26 OP2 U B 21 45.602 8.713 20.698 1.00 17.69 O
ATOM 27 O5' U B 21 44.626 11.043 20.854 1.00 16.01 O
TER
ATOM 2 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 3 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 4 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 5 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
ATOM 6 C5' G A 47 50.511 13.226 7.344 1.00 27.57 C
ATOM 7 C4' G A 47 50.812 13.962 8.624 1.00 29.08 C
ATOM 8 O4' G A 47 50.569 13.064 9.739 1.00 29.31 O
ATOM 9 C3' G A 47 52.273 14.374 8.758 1.00 30.82 C
ATOM 10 O3' G A 47 52.375 15.482 9.642 1.00 32.84 O
ATOM 11 C2' G A 47 52.912 13.141 9.386 1.00 30.98 C
ATOM 12 O2' G A 47 54.076 13.452 10.124 1.00 31.97 O
ATOM 13 C1' G A 47 51.799 12.687 10.327 1.00 30.06 C
ATOM 14 N9 G A 47 51.753 11.264 10.645 1.00 29.62 N
ATOM 15 C8 G A 47 52.135 10.206 9.856 1.00 30.04 C
ATOM 16 N7 G A 47 51.974 9.048 10.440 1.00 30.53 N
ATOM 17 C5 G A 47 51.453 9.364 11.688 1.00 29.28 C
ATOM 18 C6 G A 47 51.074 8.526 12.767 1.00 29.03 C
ATOM 19 O6 G A 47 51.121 7.290 12.839 1.00 29.13 O
ATOM 20 N1 G A 47 50.596 9.267 13.846 1.00 27.66 N
ATOM 21 C2 G A 47 50.494 10.634 13.883 1.00 27.16 C
ATOM 22 N2 G A 47 50.012 11.167 15.017 1.00 25.32 N
ATOM 23 N3 G A 47 50.841 11.424 12.884 1.00 27.98 N
ATOM 24 C4 G A 47 51.309 10.727 11.827 1.00 29.39 C
ATOM 25 P U A 48 53.149 16.806 9.171 1.00 35.03 P
ATOM 26 OP1 U A 48 53.283 16.745 7.693 1.00 35.08 O
ATOM 27 OP2 U A 48 54.358 16.968 10.015 1.00 35.47 O
ATOM 28 O5' U A 48 52.149 17.987 9.530 1.00 34.40 O
TER
ATOM 1 O3' U B 19 45.002 16.399 16.770 1.00 17.64 O
ATOM 2 P A B 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 3 OP1 A B 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 4 OP2 A B 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 5 O5' A B 20 45.845 14.182 17.543 1.00 15.88 O
ATOM 6 C5' A B 20 44.574 13.606 17.784 1.00 16.01 C
ATOM 7 C4' A B 20 44.666 12.105 17.704 1.00 16.47 C
ATOM 8 O4' A B 20 44.577 11.714 16.305 1.00 16.26 O
ATOM 9 C3' A B 20 46.000 11.553 18.184 1.00 15.70 C
ATOM 10 O3' A B 20 45.839 10.279 18.776 1.00 16.36 O
ATOM 11 C2' A B 20 46.862 11.552 16.923 1.00 16.37 C
ATOM 12 O2' A B 20 47.866 10.551 16.932 1.00 16.53 O
ATOM 13 C1' A B 20 45.830 11.242 15.841 1.00 16.64 C
ATOM 14 N9 A B 20 46.129 11.891 14.563 1.00 16.14 N
ATOM 15 C8 A B 20 45.893 13.195 14.208 1.00 16.52 C
ATOM 16 N7 A B 20 46.315 13.500 13.002 1.00 16.97 N
ATOM 17 C5 A B 20 46.861 12.316 12.530 1.00 16.87 C
ATOM 18 C6 A B 20 47.484 11.979 11.311 1.00 17.10 C
ATOM 19 N6 A B 20 47.689 12.850 10.316 1.00 17.38 N
ATOM 20 N1 A B 20 47.900 10.702 11.151 1.00 17.38 N
ATOM 21 C2 A B 20 47.708 9.836 12.153 1.00 18.03 C
ATOM 22 N3 A B 20 47.144 10.036 13.348 1.00 16.88 N
ATOM 23 C4 A B 20 46.739 11.311 13.474 1.00 15.96 C
ATOM 24 P U B 21 45.857 10.149 20.378 1.00 15.89 P
ATOM 25 OP1 U B 21 47.100 10.793 20.848 1.00 15.32 O
ATOM 26 OP2 U B 21 45.602 8.713 20.698 1.00 17.69 O
ATOM 27 O5' U B 21 44.626 11.043 20.854 1.00 16.01 O
TER
Atoms:
OP1: (49.050,12.848,4.651)
OP2: (48.700,10.906,6.298)
C3': (52.273,14.374,8.758)
C1': (51.799,12.687,10.327)
C5': (50.511,13.226,7.344)
O6: (51.121,7.290,12.839)
O4': (50.569,13.064,9.739)
C8: (52.135,10.206,9.856)
C2: (50.494,10.634,13.883)
C6: (51.074,8.526,12.767)
C5: (51.453,9.364,11.688)
C4: (51.309,10.727,11.827)
P: (48.501,12.330,5.934)
C4': (50.812,13.962,8.624)
C2': (52.912,13.141,9.386)
O2': (54.076,13.452,10.124)
N1: (50.596,9.267,13.846)
N2: (50.012,11.167,15.017)
N3: (50.841,11.424,12.884)
N7: (51.974,9.048,10.440)
N9: (51.753,11.264,10.645)
O5': (49.106,13.203,7.113)
O3': (52.375,15.482,9.642)
OP2: (48.700,10.906,6.298)
C3': (52.273,14.374,8.758)
C1': (51.799,12.687,10.327)
C5': (50.511,13.226,7.344)
O6: (51.121,7.290,12.839)
O4': (50.569,13.064,9.739)
C8: (52.135,10.206,9.856)
C2: (50.494,10.634,13.883)
C6: (51.074,8.526,12.767)
C5: (51.453,9.364,11.688)
C4: (51.309,10.727,11.827)
P: (48.501,12.330,5.934)
C4': (50.812,13.962,8.624)
C2': (52.912,13.141,9.386)
O2': (54.076,13.452,10.124)
N1: (50.596,9.267,13.846)
N2: (50.012,11.167,15.017)
N3: (50.841,11.424,12.884)
N7: (51.974,9.048,10.440)
N9: (51.753,11.264,10.645)
O5': (49.106,13.203,7.113)
O3': (52.375,15.482,9.642)
OP1: (45.682,16.105,19.143)
OP2: (47.445,16.052,17.285)
C3': (46.000,11.553,18.184)
C1': (45.830,11.242,15.841)
C5': (44.574,13.606,17.784)
O4': (44.577,11.714,16.305)
C8: (45.893,13.195,14.208)
O2': (47.866,10.551,16.932)
C6: (47.484,11.979,11.311)
C5: (46.861,12.316,12.530)
C4: (46.739,11.311,13.474)
P: (46.078,15.739,17.756)
C4': (44.666,12.105,17.704)
C2': (46.862,11.552,16.923)
C2: (47.708,9.836,12.153)
N1: (47.900,10.702,11.151)
N3: (47.144,10.036,13.348)
N6: (47.689,12.850,10.316)
N7: (46.315,13.500,13.002)
N9: (46.129,11.891,14.563)
O5': (45.845,14.182,17.543)
O3': (45.839,10.279,18.776)
OP2: (47.445,16.052,17.285)
C3': (46.000,11.553,18.184)
C1': (45.830,11.242,15.841)
C5': (44.574,13.606,17.784)
O4': (44.577,11.714,16.305)
C8: (45.893,13.195,14.208)
O2': (47.866,10.551,16.932)
C6: (47.484,11.979,11.311)
C5: (46.861,12.316,12.530)
C4: (46.739,11.311,13.474)
P: (46.078,15.739,17.756)
C4': (44.666,12.105,17.704)
C2': (46.862,11.552,16.923)
C2: (47.708,9.836,12.153)
N1: (47.900,10.702,11.151)
N3: (47.144,10.036,13.348)
N6: (47.689,12.850,10.316)
N7: (46.315,13.500,13.002)
N9: (46.129,11.891,14.563)
O5': (45.845,14.182,17.543)
O3': (45.839,10.279,18.776)
Image (generated by PyMOL):