Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:W9:W24
Extra
PDB:
ATOM 1 O3' C A 8 122.420 -11.120 26.574 1.00131.88 O
ATOM 2 P G A 9 121.554 -11.478 27.886 1.00132.15 P
ATOM 3 OP1 G A 9 122.281 -10.899 29.053 1.00131.33 O
ATOM 4 OP2 G A 9 121.290 -12.945 27.843 1.00132.30 O
ATOM 5 O5' G A 9 120.163 -10.701 27.703 1.00131.50 O
ATOM 6 C5' G A 9 119.026 -11.012 28.536 1.00129.52 C
ATOM 7 C4' G A 9 117.990 -9.897 28.495 1.00127.56 C
ATOM 8 O4' G A 9 118.643 -8.646 28.839 1.00128.03 O
ATOM 9 C3' G A 9 117.319 -9.628 27.155 1.00126.55 C
ATOM 10 O3' G A 9 116.170 -10.445 26.948 1.00124.49 O
ATOM 11 C2' G A 9 116.938 -8.158 27.262 1.00127.08 C
ATOM 12 O2' G A 9 115.746 -7.971 27.996 1.00126.90 O
ATOM 13 C1' G A 9 118.114 -7.588 28.058 1.00127.62 C
ATOM 14 N9 G A 9 119.194 -7.070 27.216 1.00127.91 N
ATOM 15 C8 G A 9 120.524 -7.408 27.291 1.00128.02 C
ATOM 16 N7 G A 9 121.260 -6.804 26.399 1.00128.41 N
ATOM 17 C5 G A 9 120.366 -6.011 25.694 1.00128.76 C
ATOM 18 C6 G A 9 120.584 -5.127 24.599 1.00129.28 C
ATOM 19 O6 G A 9 121.645 -4.859 24.019 1.00129.39 O
ATOM 20 N1 G A 9 119.400 -4.531 24.183 1.00129.49 N
ATOM 21 C2 G A 9 118.167 -4.754 24.742 1.00129.27 C
ATOM 22 N2 G A 9 117.143 -4.093 24.186 1.00129.29 N
ATOM 23 N3 G A 9 117.950 -5.568 25.766 1.00128.79 N
ATOM 24 C4 G A 9 119.086 -6.160 26.187 1.00128.34 C
ATOM 25 P C A 10 115.692 -10.785 25.444 1.00124.30 P
ATOM 26 OP1 C A 10 114.529 -11.710 25.505 1.00123.57 O
ATOM 27 OP2 C A 10 116.885 -11.165 24.647 1.00124.29 O
ATOM 28 O5' C A 10 115.206 -9.391 24.848 1.00124.34 O
TER
ATOM 1 O3' C B 23 117.613 2.522 19.756 1.00133.22 O
ATOM 2 P A B 24 117.783 3.114 21.249 1.00132.73 P
ATOM 3 OP1 A B 24 116.613 3.988 21.534 1.00133.36 O
ATOM 4 OP2 A B 24 119.158 3.668 21.379 1.00132.67 O
ATOM 5 O5' A B 24 117.690 1.832 22.191 1.00131.64 O
ATOM 6 C5' A B 24 116.430 1.257 22.519 1.00130.03 C
ATOM 7 C4' A B 24 116.576 0.313 23.686 1.00129.47 C
ATOM 8 O4' A B 24 117.318 -0.867 23.284 1.00128.87 O
ATOM 9 C3' A B 24 117.343 0.856 24.880 1.00129.10 C
ATOM 10 O3' A B 24 116.513 1.667 25.706 1.00129.51 O
ATOM 11 C2' A B 24 117.822 -0.419 25.572 1.00128.49 C
ATOM 12 O2' A B 24 116.854 -1.018 26.410 1.00128.67 O
ATOM 13 C1' A B 24 118.078 -1.344 24.380 1.00128.04 C
ATOM 14 N9 A B 24 119.490 -1.384 24.001 1.00127.29 N
ATOM 15 C8 A B 24 120.077 -1.098 22.791 1.00126.95 C
ATOM 16 N7 A B 24 121.382 -1.215 22.800 1.00126.57 N
ATOM 17 C5 A B 24 121.672 -1.607 24.100 1.00126.92 C
ATOM 18 C6 A B 24 122.877 -1.882 24.758 1.00127.39 C
ATOM 19 N6 A B 24 124.073 -1.796 24.173 1.00128.38 N
ATOM 20 N1 A B 24 122.816 -2.246 26.058 1.00127.16 N
ATOM 21 C2 A B 24 121.620 -2.317 26.647 1.00126.00 C
ATOM 22 N3 A B 24 120.421 -2.075 26.139 1.00126.03 N
ATOM 23 C4 A B 24 120.517 -1.721 24.846 1.00126.69 C
ATOM 24 P C B 25 117.056 3.088 26.235 1.00129.16 P
ATOM 25 OP1 C B 25 115.953 3.736 27.001 1.00128.76 O
ATOM 26 OP2 C B 25 117.672 3.799 25.081 1.00128.76 O
ATOM 27 O5' C B 25 118.223 2.706 27.252 1.00128.61 O
TER
ATOM 2 P G A 9 121.554 -11.478 27.886 1.00132.15 P
ATOM 3 OP1 G A 9 122.281 -10.899 29.053 1.00131.33 O
ATOM 4 OP2 G A 9 121.290 -12.945 27.843 1.00132.30 O
ATOM 5 O5' G A 9 120.163 -10.701 27.703 1.00131.50 O
ATOM 6 C5' G A 9 119.026 -11.012 28.536 1.00129.52 C
ATOM 7 C4' G A 9 117.990 -9.897 28.495 1.00127.56 C
ATOM 8 O4' G A 9 118.643 -8.646 28.839 1.00128.03 O
ATOM 9 C3' G A 9 117.319 -9.628 27.155 1.00126.55 C
ATOM 10 O3' G A 9 116.170 -10.445 26.948 1.00124.49 O
ATOM 11 C2' G A 9 116.938 -8.158 27.262 1.00127.08 C
ATOM 12 O2' G A 9 115.746 -7.971 27.996 1.00126.90 O
ATOM 13 C1' G A 9 118.114 -7.588 28.058 1.00127.62 C
ATOM 14 N9 G A 9 119.194 -7.070 27.216 1.00127.91 N
ATOM 15 C8 G A 9 120.524 -7.408 27.291 1.00128.02 C
ATOM 16 N7 G A 9 121.260 -6.804 26.399 1.00128.41 N
ATOM 17 C5 G A 9 120.366 -6.011 25.694 1.00128.76 C
ATOM 18 C6 G A 9 120.584 -5.127 24.599 1.00129.28 C
ATOM 19 O6 G A 9 121.645 -4.859 24.019 1.00129.39 O
ATOM 20 N1 G A 9 119.400 -4.531 24.183 1.00129.49 N
ATOM 21 C2 G A 9 118.167 -4.754 24.742 1.00129.27 C
ATOM 22 N2 G A 9 117.143 -4.093 24.186 1.00129.29 N
ATOM 23 N3 G A 9 117.950 -5.568 25.766 1.00128.79 N
ATOM 24 C4 G A 9 119.086 -6.160 26.187 1.00128.34 C
ATOM 25 P C A 10 115.692 -10.785 25.444 1.00124.30 P
ATOM 26 OP1 C A 10 114.529 -11.710 25.505 1.00123.57 O
ATOM 27 OP2 C A 10 116.885 -11.165 24.647 1.00124.29 O
ATOM 28 O5' C A 10 115.206 -9.391 24.848 1.00124.34 O
TER
ATOM 1 O3' C B 23 117.613 2.522 19.756 1.00133.22 O
ATOM 2 P A B 24 117.783 3.114 21.249 1.00132.73 P
ATOM 3 OP1 A B 24 116.613 3.988 21.534 1.00133.36 O
ATOM 4 OP2 A B 24 119.158 3.668 21.379 1.00132.67 O
ATOM 5 O5' A B 24 117.690 1.832 22.191 1.00131.64 O
ATOM 6 C5' A B 24 116.430 1.257 22.519 1.00130.03 C
ATOM 7 C4' A B 24 116.576 0.313 23.686 1.00129.47 C
ATOM 8 O4' A B 24 117.318 -0.867 23.284 1.00128.87 O
ATOM 9 C3' A B 24 117.343 0.856 24.880 1.00129.10 C
ATOM 10 O3' A B 24 116.513 1.667 25.706 1.00129.51 O
ATOM 11 C2' A B 24 117.822 -0.419 25.572 1.00128.49 C
ATOM 12 O2' A B 24 116.854 -1.018 26.410 1.00128.67 O
ATOM 13 C1' A B 24 118.078 -1.344 24.380 1.00128.04 C
ATOM 14 N9 A B 24 119.490 -1.384 24.001 1.00127.29 N
ATOM 15 C8 A B 24 120.077 -1.098 22.791 1.00126.95 C
ATOM 16 N7 A B 24 121.382 -1.215 22.800 1.00126.57 N
ATOM 17 C5 A B 24 121.672 -1.607 24.100 1.00126.92 C
ATOM 18 C6 A B 24 122.877 -1.882 24.758 1.00127.39 C
ATOM 19 N6 A B 24 124.073 -1.796 24.173 1.00128.38 N
ATOM 20 N1 A B 24 122.816 -2.246 26.058 1.00127.16 N
ATOM 21 C2 A B 24 121.620 -2.317 26.647 1.00126.00 C
ATOM 22 N3 A B 24 120.421 -2.075 26.139 1.00126.03 N
ATOM 23 C4 A B 24 120.517 -1.721 24.846 1.00126.69 C
ATOM 24 P C B 25 117.056 3.088 26.235 1.00129.16 P
ATOM 25 OP1 C B 25 115.953 3.736 27.001 1.00128.76 O
ATOM 26 OP2 C B 25 117.672 3.799 25.081 1.00128.76 O
ATOM 27 O5' C B 25 118.223 2.706 27.252 1.00128.61 O
TER
Atoms:
OP1: (122.281,-10.899,29.053)
OP2: (121.290,-12.945,27.843)
C3': (117.319,-9.628,27.155)
C1': (118.114,-7.588,28.058)
C5': (119.026,-11.012,28.536)
O6: (121.645,-4.859,24.019)
O4': (118.643,-8.646,28.839)
C8: (120.524,-7.408,27.291)
C2: (118.167,-4.754,24.742)
C6: (120.584,-5.127,24.599)
C5: (120.366,-6.011,25.694)
C4: (119.086,-6.160,26.187)
P: (121.554,-11.478,27.886)
C4': (117.990,-9.897,28.495)
C2': (116.938,-8.158,27.262)
O2': (115.746,-7.971,27.996)
N1: (119.400,-4.531,24.183)
N2: (117.143,-4.093,24.186)
N3: (117.950,-5.568,25.766)
N7: (121.260,-6.804,26.399)
N9: (119.194,-7.070,27.216)
O5': (120.163,-10.701,27.703)
O3': (116.170,-10.445,26.948)
OP2: (121.290,-12.945,27.843)
C3': (117.319,-9.628,27.155)
C1': (118.114,-7.588,28.058)
C5': (119.026,-11.012,28.536)
O6: (121.645,-4.859,24.019)
O4': (118.643,-8.646,28.839)
C8: (120.524,-7.408,27.291)
C2: (118.167,-4.754,24.742)
C6: (120.584,-5.127,24.599)
C5: (120.366,-6.011,25.694)
C4: (119.086,-6.160,26.187)
P: (121.554,-11.478,27.886)
C4': (117.990,-9.897,28.495)
C2': (116.938,-8.158,27.262)
O2': (115.746,-7.971,27.996)
N1: (119.400,-4.531,24.183)
N2: (117.143,-4.093,24.186)
N3: (117.950,-5.568,25.766)
N7: (121.260,-6.804,26.399)
N9: (119.194,-7.070,27.216)
O5': (120.163,-10.701,27.703)
O3': (116.170,-10.445,26.948)
OP1: (116.613,3.988,21.534)
OP2: (119.158,3.668,21.379)
C3': (117.343,0.856,24.880)
C1': (118.078,-1.344,24.380)
C5': (116.430,1.257,22.519)
O4': (117.318,-0.867,23.284)
C8: (120.077,-1.098,22.791)
O2': (116.854,-1.018,26.410)
C6: (122.877,-1.882,24.758)
C5: (121.672,-1.607,24.100)
C4: (120.517,-1.721,24.846)
P: (117.783,3.114,21.249)
C4': (116.576,0.313,23.686)
C2': (117.822,-0.419,25.572)
C2: (121.620,-2.317,26.647)
N1: (122.816,-2.246,26.058)
N3: (120.421,-2.075,26.139)
N6: (124.073,-1.796,24.173)
N7: (121.382,-1.215,22.800)
N9: (119.490,-1.384,24.001)
O5': (117.690,1.832,22.191)
O3': (116.513,1.667,25.706)
OP2: (119.158,3.668,21.379)
C3': (117.343,0.856,24.880)
C1': (118.078,-1.344,24.380)
C5': (116.430,1.257,22.519)
O4': (117.318,-0.867,23.284)
C8: (120.077,-1.098,22.791)
O2': (116.854,-1.018,26.410)
C6: (122.877,-1.882,24.758)
C5: (121.672,-1.607,24.100)
C4: (120.517,-1.721,24.846)
P: (117.783,3.114,21.249)
C4': (116.576,0.313,23.686)
C2': (117.822,-0.419,25.572)
C2: (121.620,-2.317,26.647)
N1: (122.816,-2.246,26.058)
N3: (120.421,-2.075,26.139)
N6: (124.073,-1.796,24.173)
N7: (121.382,-1.215,22.800)
N9: (119.490,-1.384,24.001)
O5': (117.690,1.832,22.191)
O3': (116.513,1.667,25.706)
Image (generated by PyMOL):