Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A521:A486
Extra
PDB:
ATOM 1 O3' A A 520 42.234 -93.593 -29.879 1.00 62.51 O
ATOM 2 P G A 521 41.999 -92.763 -28.540 1.00 54.12 P
ATOM 3 OP1 G A 521 42.091 -93.719 -27.421 1.00 83.82 O
ATOM 4 OP2 G A 521 40.753 -92.006 -28.718 1.00 93.22 O
ATOM 5 O5' G A 521 43.240 -91.752 -28.520 1.00 95.57 O
ATOM 6 C5' G A 521 44.599 -92.207 -28.502 1.00 98.52 C
ATOM 7 C4' G A 521 45.367 -91.753 -29.746 1.00112.69 C
ATOM 8 O4' G A 521 44.959 -90.413 -30.144 1.00121.95 O
ATOM 9 C3' G A 521 46.892 -91.646 -29.628 1.00105.63 C
ATOM 10 O3' G A 521 47.547 -92.897 -29.751 1.00 91.29 O
ATOM 11 C2' G A 521 47.257 -90.679 -30.761 1.00104.98 C
ATOM 12 O2' G A 521 47.414 -91.382 -31.986 1.00103.29 O
ATOM 13 C1' G A 521 46.010 -89.792 -30.867 1.00110.73 C
ATOM 14 N9 G A 521 46.238 -88.425 -30.348 1.00145.38 N
ATOM 15 C8 G A 521 45.838 -87.861 -29.160 1.00150.78 C
ATOM 16 N7 G A 521 46.212 -86.615 -29.025 1.00154.97 N
ATOM 17 C5 G A 521 46.899 -86.327 -30.197 1.00158.49 C
ATOM 18 C6 G A 521 47.539 -85.126 -30.625 1.00159.09 C
ATOM 19 O6 G A 521 47.627 -84.038 -30.034 1.00155.64 O
ATOM 20 N1 G A 521 48.117 -85.283 -31.884 1.00150.91 N
ATOM 21 C2 G A 521 48.081 -86.439 -32.628 1.00149.82 C
ATOM 22 N2 G A 521 48.695 -86.389 -33.816 1.00141.12 N
ATOM 23 N3 G A 521 47.490 -87.560 -32.244 1.00151.75 N
ATOM 24 C4 G A 521 46.919 -87.435 -31.025 1.00153.54 C
ATOM 25 P C A 522 48.012 -93.707 -28.453 1.00 64.56 P
ATOM 26 OP1 C A 522 46.905 -93.592 -27.431 1.00 59.47 O
ATOM 27 OP2 C A 522 49.366 -93.233 -28.104 1.00 68.42 O
ATOM 28 O5' C A 522 48.102 -95.183 -29.002 1.00 46.74 O
TER
ATOM 1 O3' A B 485 55.560 -80.637 -33.173 1.00 35.54 O
ATOM 2 P A B 486 55.397 -82.023 -33.926 1.00 40.98 P
ATOM 3 OP1 A B 486 55.990 -83.064 -33.058 1.00 45.33 O
ATOM 4 OP2 A B 486 55.940 -81.842 -35.293 1.00 42.32 O
ATOM 5 O5' A B 486 53.813 -82.193 -33.996 1.00 42.76 O
ATOM 6 C5' A B 486 53.124 -83.038 -33.082 1.00 37.01 C
ATOM 7 C4' A B 486 51.641 -83.124 -33.384 1.00 43.65 C
ATOM 8 O4' A B 486 51.162 -81.829 -33.809 1.00 43.03 O
ATOM 9 C3' A B 486 51.252 -84.091 -34.434 1.00 35.75 C
ATOM 10 O3' A B 486 52.333 -84.687 -35.049 1.00 31.54 O
ATOM 11 C2' A B 486 50.347 -83.408 -35.387 1.00 39.97 C
ATOM 12 O2' A B 486 49.055 -83.975 -35.449 1.00 49.32 O
ATOM 13 C1' A B 486 50.289 -81.953 -34.903 1.00 37.90 C
ATOM 14 N9 A B 486 50.736 -81.018 -35.933 1.00 34.34 N
ATOM 15 C8 A B 486 52.015 -80.590 -36.135 1.00 35.00 C
ATOM 16 N7 A B 486 52.163 -79.807 -37.174 1.00 33.97 N
ATOM 17 C5 A B 486 50.891 -79.739 -37.722 1.00 35.58 C
ATOM 18 C6 A B 486 50.378 -79.078 -38.854 1.00 37.40 C
ATOM 19 N6 A B 486 51.111 -78.315 -39.676 1.00 37.39 N
ATOM 20 N1 A B 486 49.063 -79.211 -39.115 1.00 34.26 N
ATOM 21 C2 A B 486 48.339 -79.976 -38.303 1.00 35.18 C
ATOM 22 N3 A B 486 48.708 -80.652 -37.222 1.00 38.27 N
ATOM 23 C4 A B 486 50.010 -80.495 -36.978 1.00 34.49 C
ATOM 24 P G B 487 52.297 -86.233 -35.515 1.00 33.68 P
ATOM 25 OP1 G B 487 51.334 -86.925 -34.664 1.00 59.81 O
ATOM 26 OP2 G B 487 53.690 -86.714 -35.538 1.00 56.83 O
ATOM 27 O5' G B 487 51.747 -86.152 -36.992 1.00 38.37 O
TER
ATOM 2 P G A 521 41.999 -92.763 -28.540 1.00 54.12 P
ATOM 3 OP1 G A 521 42.091 -93.719 -27.421 1.00 83.82 O
ATOM 4 OP2 G A 521 40.753 -92.006 -28.718 1.00 93.22 O
ATOM 5 O5' G A 521 43.240 -91.752 -28.520 1.00 95.57 O
ATOM 6 C5' G A 521 44.599 -92.207 -28.502 1.00 98.52 C
ATOM 7 C4' G A 521 45.367 -91.753 -29.746 1.00112.69 C
ATOM 8 O4' G A 521 44.959 -90.413 -30.144 1.00121.95 O
ATOM 9 C3' G A 521 46.892 -91.646 -29.628 1.00105.63 C
ATOM 10 O3' G A 521 47.547 -92.897 -29.751 1.00 91.29 O
ATOM 11 C2' G A 521 47.257 -90.679 -30.761 1.00104.98 C
ATOM 12 O2' G A 521 47.414 -91.382 -31.986 1.00103.29 O
ATOM 13 C1' G A 521 46.010 -89.792 -30.867 1.00110.73 C
ATOM 14 N9 G A 521 46.238 -88.425 -30.348 1.00145.38 N
ATOM 15 C8 G A 521 45.838 -87.861 -29.160 1.00150.78 C
ATOM 16 N7 G A 521 46.212 -86.615 -29.025 1.00154.97 N
ATOM 17 C5 G A 521 46.899 -86.327 -30.197 1.00158.49 C
ATOM 18 C6 G A 521 47.539 -85.126 -30.625 1.00159.09 C
ATOM 19 O6 G A 521 47.627 -84.038 -30.034 1.00155.64 O
ATOM 20 N1 G A 521 48.117 -85.283 -31.884 1.00150.91 N
ATOM 21 C2 G A 521 48.081 -86.439 -32.628 1.00149.82 C
ATOM 22 N2 G A 521 48.695 -86.389 -33.816 1.00141.12 N
ATOM 23 N3 G A 521 47.490 -87.560 -32.244 1.00151.75 N
ATOM 24 C4 G A 521 46.919 -87.435 -31.025 1.00153.54 C
ATOM 25 P C A 522 48.012 -93.707 -28.453 1.00 64.56 P
ATOM 26 OP1 C A 522 46.905 -93.592 -27.431 1.00 59.47 O
ATOM 27 OP2 C A 522 49.366 -93.233 -28.104 1.00 68.42 O
ATOM 28 O5' C A 522 48.102 -95.183 -29.002 1.00 46.74 O
TER
ATOM 1 O3' A B 485 55.560 -80.637 -33.173 1.00 35.54 O
ATOM 2 P A B 486 55.397 -82.023 -33.926 1.00 40.98 P
ATOM 3 OP1 A B 486 55.990 -83.064 -33.058 1.00 45.33 O
ATOM 4 OP2 A B 486 55.940 -81.842 -35.293 1.00 42.32 O
ATOM 5 O5' A B 486 53.813 -82.193 -33.996 1.00 42.76 O
ATOM 6 C5' A B 486 53.124 -83.038 -33.082 1.00 37.01 C
ATOM 7 C4' A B 486 51.641 -83.124 -33.384 1.00 43.65 C
ATOM 8 O4' A B 486 51.162 -81.829 -33.809 1.00 43.03 O
ATOM 9 C3' A B 486 51.252 -84.091 -34.434 1.00 35.75 C
ATOM 10 O3' A B 486 52.333 -84.687 -35.049 1.00 31.54 O
ATOM 11 C2' A B 486 50.347 -83.408 -35.387 1.00 39.97 C
ATOM 12 O2' A B 486 49.055 -83.975 -35.449 1.00 49.32 O
ATOM 13 C1' A B 486 50.289 -81.953 -34.903 1.00 37.90 C
ATOM 14 N9 A B 486 50.736 -81.018 -35.933 1.00 34.34 N
ATOM 15 C8 A B 486 52.015 -80.590 -36.135 1.00 35.00 C
ATOM 16 N7 A B 486 52.163 -79.807 -37.174 1.00 33.97 N
ATOM 17 C5 A B 486 50.891 -79.739 -37.722 1.00 35.58 C
ATOM 18 C6 A B 486 50.378 -79.078 -38.854 1.00 37.40 C
ATOM 19 N6 A B 486 51.111 -78.315 -39.676 1.00 37.39 N
ATOM 20 N1 A B 486 49.063 -79.211 -39.115 1.00 34.26 N
ATOM 21 C2 A B 486 48.339 -79.976 -38.303 1.00 35.18 C
ATOM 22 N3 A B 486 48.708 -80.652 -37.222 1.00 38.27 N
ATOM 23 C4 A B 486 50.010 -80.495 -36.978 1.00 34.49 C
ATOM 24 P G B 487 52.297 -86.233 -35.515 1.00 33.68 P
ATOM 25 OP1 G B 487 51.334 -86.925 -34.664 1.00 59.81 O
ATOM 26 OP2 G B 487 53.690 -86.714 -35.538 1.00 56.83 O
ATOM 27 O5' G B 487 51.747 -86.152 -36.992 1.00 38.37 O
TER
Atoms:
OP1: (42.091,-93.719,-27.421)
OP2: (40.753,-92.006,-28.718)
C3': (46.892,-91.646,-29.628)
C1': (46.010,-89.792,-30.867)
C5': (44.599,-92.207,-28.502)
O6: (47.627,-84.038,-30.034)
O4': (44.959,-90.413,-30.144)
C8: (45.838,-87.861,-29.160)
C2: (48.081,-86.439,-32.628)
C6: (47.539,-85.126,-30.625)
C5: (46.899,-86.327,-30.197)
C4: (46.919,-87.435,-31.025)
P: (41.999,-92.763,-28.540)
C4': (45.367,-91.753,-29.746)
C2': (47.257,-90.679,-30.761)
O2': (47.414,-91.382,-31.986)
N1: (48.117,-85.283,-31.884)
N2: (48.695,-86.389,-33.816)
N3: (47.490,-87.560,-32.244)
N7: (46.212,-86.615,-29.025)
N9: (46.238,-88.425,-30.348)
O5': (43.240,-91.752,-28.520)
O3': (47.547,-92.897,-29.751)
OP2: (40.753,-92.006,-28.718)
C3': (46.892,-91.646,-29.628)
C1': (46.010,-89.792,-30.867)
C5': (44.599,-92.207,-28.502)
O6: (47.627,-84.038,-30.034)
O4': (44.959,-90.413,-30.144)
C8: (45.838,-87.861,-29.160)
C2: (48.081,-86.439,-32.628)
C6: (47.539,-85.126,-30.625)
C5: (46.899,-86.327,-30.197)
C4: (46.919,-87.435,-31.025)
P: (41.999,-92.763,-28.540)
C4': (45.367,-91.753,-29.746)
C2': (47.257,-90.679,-30.761)
O2': (47.414,-91.382,-31.986)
N1: (48.117,-85.283,-31.884)
N2: (48.695,-86.389,-33.816)
N3: (47.490,-87.560,-32.244)
N7: (46.212,-86.615,-29.025)
N9: (46.238,-88.425,-30.348)
O5': (43.240,-91.752,-28.520)
O3': (47.547,-92.897,-29.751)
OP1: (55.990,-83.064,-33.058)
OP2: (55.940,-81.842,-35.293)
C3': (51.252,-84.091,-34.434)
C1': (50.289,-81.953,-34.903)
C5': (53.124,-83.038,-33.082)
O4': (51.162,-81.829,-33.809)
C8: (52.015,-80.590,-36.135)
O2': (49.055,-83.975,-35.449)
C6: (50.378,-79.078,-38.854)
C5: (50.891,-79.739,-37.722)
C4: (50.010,-80.495,-36.978)
P: (55.397,-82.023,-33.926)
C4': (51.641,-83.124,-33.384)
C2': (50.347,-83.408,-35.387)
C2: (48.339,-79.976,-38.303)
N1: (49.063,-79.211,-39.115)
N3: (48.708,-80.652,-37.222)
N6: (51.111,-78.315,-39.676)
N7: (52.163,-79.807,-37.174)
N9: (50.736,-81.018,-35.933)
O5': (53.813,-82.193,-33.996)
O3': (52.333,-84.687,-35.049)
OP2: (55.940,-81.842,-35.293)
C3': (51.252,-84.091,-34.434)
C1': (50.289,-81.953,-34.903)
C5': (53.124,-83.038,-33.082)
O4': (51.162,-81.829,-33.809)
C8: (52.015,-80.590,-36.135)
O2': (49.055,-83.975,-35.449)
C6: (50.378,-79.078,-38.854)
C5: (50.891,-79.739,-37.722)
C4: (50.010,-80.495,-36.978)
P: (55.397,-82.023,-33.926)
C4': (51.641,-83.124,-33.384)
C2': (50.347,-83.408,-35.387)
C2: (48.339,-79.976,-38.303)
N1: (49.063,-79.211,-39.115)
N3: (48.708,-80.652,-37.222)
N6: (51.111,-78.315,-39.676)
N7: (52.163,-79.807,-37.174)
N9: (50.736,-81.018,-35.933)
O5': (53.813,-82.193,-33.996)
O3': (52.333,-84.687,-35.049)
Image (generated by PyMOL):