Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0949:0967
Extra
PDB:
ATOM 1 O3' A A 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 2 P C A 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 3 OP1 C A 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 4 OP2 C A 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 5 O5' C A 949 67.951 54.791 115.111 1.00 56.27 O
ATOM 6 C5' C A 949 68.390 53.836 114.131 1.00 55.90 C
ATOM 7 C4' C A 949 68.618 54.514 112.806 1.00 54.43 C
ATOM 8 O4' C A 949 67.377 55.114 112.346 1.00 54.07 O
ATOM 9 C3' C A 949 69.580 55.682 112.844 1.00 53.14 C
ATOM 10 O3' C A 949 70.930 55.275 112.814 1.00 52.96 O
ATOM 11 C2' C A 949 69.183 56.454 111.598 1.00 54.02 C
ATOM 12 O2' C A 949 69.682 55.868 110.415 1.00 55.02 O
ATOM 13 C1' C A 949 67.663 56.312 111.641 1.00 54.01 C
ATOM 14 N1 C A 949 67.018 57.447 112.330 1.00 53.49 N
ATOM 15 C2 C A 949 66.836 58.643 111.622 1.00 54.32 C
ATOM 16 O2 C A 949 67.216 58.709 110.436 1.00 55.24 O
ATOM 17 N3 C A 949 66.253 59.696 112.244 1.00 54.07 N
ATOM 18 C4 C A 949 65.861 59.588 113.513 1.00 52.64 C
ATOM 19 N4 C A 949 65.293 60.651 114.078 1.00 51.44 N
ATOM 20 C5 C A 949 66.034 58.386 114.256 1.00 52.41 C
ATOM 21 C6 C A 949 66.609 57.350 113.632 1.00 52.42 C
ATOM 22 P C A 950 72.050 56.245 113.415 1.00 54.46 P
ATOM 23 OP1 C A 950 73.353 55.876 112.823 1.00 54.12 O
ATOM 24 OP2 C A 950 71.896 56.288 114.884 1.00 54.32 O
ATOM 25 O5' C A 950 71.645 57.671 112.849 1.00 56.77 O
TER
ATOM 1 O3' A B 966 67.890 67.635 105.799 1.00 45.99 O
ATOM 2 P C B 967 68.429 66.487 106.791 1.00 47.37 P
ATOM 3 OP1 C B 967 69.020 67.106 108.010 1.00 46.67 O
ATOM 4 OP2 C B 967 69.248 65.579 105.958 1.00 49.31 O
ATOM 5 O5' C B 967 67.130 65.649 107.185 1.00 46.80 O
ATOM 6 C5' C B 967 66.470 65.845 108.437 1.00 43.34 C
ATOM 7 C4' C B 967 66.526 64.581 109.262 1.00 44.35 C
ATOM 8 O4' C B 967 66.494 64.966 110.654 1.00 44.58 O
ATOM 9 C3' C B 967 65.402 63.559 109.087 1.00 43.76 C
ATOM 10 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 11 C2' C B 967 65.370 62.880 110.451 1.00 43.51 C
ATOM 12 O2' C B 967 66.372 61.889 110.551 1.00 41.59 O
ATOM 13 C1' C B 967 65.720 64.042 111.387 1.00 42.93 C
ATOM 14 N1 C B 967 64.596 64.779 111.992 1.00 41.41 N
ATOM 15 C2 C B 967 63.921 64.213 113.065 1.00 41.62 C
ATOM 16 O2 C B 967 64.240 63.075 113.443 1.00 42.60 O
ATOM 17 N3 C B 967 62.937 64.918 113.668 1.00 40.95 N
ATOM 18 C4 C B 967 62.623 66.138 113.228 1.00 40.84 C
ATOM 19 N4 C B 967 61.667 66.807 113.867 1.00 41.21 N
ATOM 20 C5 C B 967 63.276 66.725 112.117 1.00 40.96 C
ATOM 21 C6 C B 967 64.242 66.016 111.530 1.00 41.48 C
ATOM 22 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 23 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 24 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 25 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
TER
ATOM 2 P C A 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 3 OP1 C A 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 4 OP2 C A 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 5 O5' C A 949 67.951 54.791 115.111 1.00 56.27 O
ATOM 6 C5' C A 949 68.390 53.836 114.131 1.00 55.90 C
ATOM 7 C4' C A 949 68.618 54.514 112.806 1.00 54.43 C
ATOM 8 O4' C A 949 67.377 55.114 112.346 1.00 54.07 O
ATOM 9 C3' C A 949 69.580 55.682 112.844 1.00 53.14 C
ATOM 10 O3' C A 949 70.930 55.275 112.814 1.00 52.96 O
ATOM 11 C2' C A 949 69.183 56.454 111.598 1.00 54.02 C
ATOM 12 O2' C A 949 69.682 55.868 110.415 1.00 55.02 O
ATOM 13 C1' C A 949 67.663 56.312 111.641 1.00 54.01 C
ATOM 14 N1 C A 949 67.018 57.447 112.330 1.00 53.49 N
ATOM 15 C2 C A 949 66.836 58.643 111.622 1.00 54.32 C
ATOM 16 O2 C A 949 67.216 58.709 110.436 1.00 55.24 O
ATOM 17 N3 C A 949 66.253 59.696 112.244 1.00 54.07 N
ATOM 18 C4 C A 949 65.861 59.588 113.513 1.00 52.64 C
ATOM 19 N4 C A 949 65.293 60.651 114.078 1.00 51.44 N
ATOM 20 C5 C A 949 66.034 58.386 114.256 1.00 52.41 C
ATOM 21 C6 C A 949 66.609 57.350 113.632 1.00 52.42 C
ATOM 22 P C A 950 72.050 56.245 113.415 1.00 54.46 P
ATOM 23 OP1 C A 950 73.353 55.876 112.823 1.00 54.12 O
ATOM 24 OP2 C A 950 71.896 56.288 114.884 1.00 54.32 O
ATOM 25 O5' C A 950 71.645 57.671 112.849 1.00 56.77 O
TER
ATOM 1 O3' A B 966 67.890 67.635 105.799 1.00 45.99 O
ATOM 2 P C B 967 68.429 66.487 106.791 1.00 47.37 P
ATOM 3 OP1 C B 967 69.020 67.106 108.010 1.00 46.67 O
ATOM 4 OP2 C B 967 69.248 65.579 105.958 1.00 49.31 O
ATOM 5 O5' C B 967 67.130 65.649 107.185 1.00 46.80 O
ATOM 6 C5' C B 967 66.470 65.845 108.437 1.00 43.34 C
ATOM 7 C4' C B 967 66.526 64.581 109.262 1.00 44.35 C
ATOM 8 O4' C B 967 66.494 64.966 110.654 1.00 44.58 O
ATOM 9 C3' C B 967 65.402 63.559 109.087 1.00 43.76 C
ATOM 10 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 11 C2' C B 967 65.370 62.880 110.451 1.00 43.51 C
ATOM 12 O2' C B 967 66.372 61.889 110.551 1.00 41.59 O
ATOM 13 C1' C B 967 65.720 64.042 111.387 1.00 42.93 C
ATOM 14 N1 C B 967 64.596 64.779 111.992 1.00 41.41 N
ATOM 15 C2 C B 967 63.921 64.213 113.065 1.00 41.62 C
ATOM 16 O2 C B 967 64.240 63.075 113.443 1.00 42.60 O
ATOM 17 N3 C B 967 62.937 64.918 113.668 1.00 40.95 N
ATOM 18 C4 C B 967 62.623 66.138 113.228 1.00 40.84 C
ATOM 19 N4 C B 967 61.667 66.807 113.867 1.00 41.21 N
ATOM 20 C5 C B 967 63.276 66.725 112.117 1.00 40.96 C
ATOM 21 C6 C B 967 64.242 66.016 111.530 1.00 41.48 C
ATOM 22 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 23 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 24 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 25 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
TER
Atoms:
C2: (66.836,58.643,111.622)
OP1: (68.610,53.619,117.169)
OP2: (66.802,55.429,117.240)
C4: (65.861,59.588,113.513)
O5': (67.951,54.791,115.111)
C3': (69.580,55.682,112.844)
C1': (67.663,56.312,111.641)
O4': (67.377,55.114,112.346)
C5': (68.390,53.836,114.131)
P: (67.457,54.302,116.538)
O2: (67.216,58.709,110.436)
C4': (68.618,54.514,112.806)
C2': (69.183,56.454,111.598)
O2': (69.682,55.868,110.415)
N1: (67.018,57.447,112.330)
N3: (66.253,59.696,112.244)
N4: (65.293,60.651,114.078)
C6: (66.609,57.350,113.632)
C5: (66.034,58.386,114.256)
O3': (70.930,55.275,112.814)
OP1: (68.610,53.619,117.169)
OP2: (66.802,55.429,117.240)
C4: (65.861,59.588,113.513)
O5': (67.951,54.791,115.111)
C3': (69.580,55.682,112.844)
C1': (67.663,56.312,111.641)
O4': (67.377,55.114,112.346)
C5': (68.390,53.836,114.131)
P: (67.457,54.302,116.538)
O2: (67.216,58.709,110.436)
C4': (68.618,54.514,112.806)
C2': (69.183,56.454,111.598)
O2': (69.682,55.868,110.415)
N1: (67.018,57.447,112.330)
N3: (66.253,59.696,112.244)
N4: (65.293,60.651,114.078)
C6: (66.609,57.350,113.632)
C5: (66.034,58.386,114.256)
O3': (70.930,55.275,112.814)
C2: (63.921,64.213,113.065)
OP1: (69.020,67.106,108.010)
OP2: (69.248,65.579,105.958)
C4: (62.623,66.138,113.228)
O5': (67.130,65.649,107.185)
C3': (65.402,63.559,109.087)
C1': (65.720,64.042,111.387)
O4': (66.494,64.966,110.654)
C5': (66.470,65.845,108.437)
P: (68.429,66.487,106.791)
O2: (64.240,63.075,113.443)
C4': (66.526,64.581,109.262)
C2': (65.370,62.880,110.451)
O2': (66.372,61.889,110.551)
N1: (64.596,64.779,111.992)
N3: (62.937,64.918,113.668)
N4: (61.667,66.807,113.867)
C6: (64.242,66.016,111.530)
C5: (63.276,66.725,112.117)
O3': (65.676,62.594,108.060)
OP1: (69.020,67.106,108.010)
OP2: (69.248,65.579,105.958)
C4: (62.623,66.138,113.228)
O5': (67.130,65.649,107.185)
C3': (65.402,63.559,109.087)
C1': (65.720,64.042,111.387)
O4': (66.494,64.966,110.654)
C5': (66.470,65.845,108.437)
P: (68.429,66.487,106.791)
O2: (64.240,63.075,113.443)
C4': (66.526,64.581,109.262)
C2': (65.370,62.880,110.451)
O2': (66.372,61.889,110.551)
N1: (64.596,64.779,111.992)
N3: (62.937,64.918,113.668)
N4: (61.667,66.807,113.867)
C6: (64.242,66.016,111.530)
C5: (63.276,66.725,112.117)
O3': (65.676,62.594,108.060)
Image (generated by PyMOL):