Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2217:A2191
Extra
PDB:
ATOM 1 O3' G A2216 -61.020 -0.158 55.936 1.00 1.76 O
ATOM 2 P G A2217 -62.132 0.586 56.777 1.00 0.60 P
ATOM 3 OP1 G A2217 -63.262 0.842 55.887 1.00 0.60 O
ATOM 4 OP2 G A2217 -61.473 1.716 57.433 1.00 0.60 O
ATOM 5 O5' G A2217 -62.524 -0.510 57.863 1.00 0.60 O
ATOM 6 C5' G A2217 -62.437 -1.895 57.548 1.00 0.60 C
ATOM 7 C4' G A2217 -62.574 -2.766 58.769 1.00 0.60 C
ATOM 8 O4' G A2217 -61.299 -2.876 59.442 1.00 0.60 O
ATOM 9 C3' G A2217 -63.518 -2.282 59.854 1.00 0.60 C
ATOM 10 O3' G A2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 11 C2' G A2217 -63.012 -3.041 61.070 1.00 0.60 C
ATOM 12 O2' G A2217 -63.508 -4.368 61.073 1.00 0.60 O
ATOM 13 C1' G A2217 -61.507 -3.100 60.812 1.00 0.60 C
ATOM 14 N9 G A2217 -60.762 -2.085 61.561 1.00 0.93 N
ATOM 15 C8 G A2217 -60.426 -0.878 61.045 1.00 0.93 C
ATOM 16 N7 G A2217 -59.726 -0.133 61.853 1.00 0.93 N
ATOM 17 C5 G A2217 -59.601 -0.917 62.972 1.00 0.93 C
ATOM 18 C6 G A2217 -58.930 -0.617 64.179 1.00 0.93 C
ATOM 19 O6 G A2217 -58.316 0.429 64.489 1.00 0.93 O
ATOM 20 N1 G A2217 -59.014 -1.693 65.054 1.00 0.93 N
ATOM 21 C2 G A2217 -59.655 -2.852 64.806 1.00 0.93 C
ATOM 22 N2 G A2217 -59.600 -3.712 65.810 1.00 0.93 N
ATOM 23 N3 G A2217 -60.286 -3.121 63.693 1.00 0.93 N
ATOM 24 C4 G A2217 -60.220 -2.122 62.811 1.00 0.93 C
ATOM 25 P A A2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 26 OP1 A A2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 27 OP2 A A2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 28 O5' A A2218 -66.285 -2.322 61.626 1.00 7.10 O
TER
ATOM 1 O3' U B2190 -57.995 -0.405 70.131 1.00 2.97 O
ATOM 2 P A B2191 -56.520 -0.964 70.433 1.00 15.31 P
ATOM 3 OP1 A B2191 -55.759 0.154 71.056 1.00 15.31 O
ATOM 4 OP2 A B2191 -56.002 -1.576 69.176 1.00 15.31 O
ATOM 5 O5' A B2191 -56.793 -2.109 71.502 1.00 15.31 O
ATOM 6 C5' A B2191 -56.136 -3.365 71.395 1.00 15.31 C
ATOM 7 C4' A B2191 -57.100 -4.474 71.070 1.00 15.31 C
ATOM 8 O4' A B2191 -58.361 -4.216 71.739 1.00 15.31 O
ATOM 9 C3' A B2191 -57.450 -4.629 69.597 1.00 15.31 C
ATOM 10 O3' A B2191 -57.781 -5.988 69.347 1.00 15.31 O
ATOM 11 C2' A B2191 -58.711 -3.813 69.500 1.00 15.31 C
ATOM 12 O2' A B2191 -59.507 -4.098 68.385 1.00 15.31 O
ATOM 13 C1' A B2191 -59.381 -4.240 70.777 1.00 15.31 C
ATOM 14 N9 A B2191 -60.471 -3.379 71.201 1.00 15.48 N
ATOM 15 C8 A B2191 -60.571 -2.018 71.339 1.00 15.48 C
ATOM 16 N7 A B2191 -61.775 -1.645 71.718 1.00 15.48 N
ATOM 17 C5 A B2191 -62.507 -2.836 71.808 1.00 15.48 C
ATOM 18 C6 A B2191 -63.841 -3.162 72.152 1.00 15.48 C
ATOM 19 N6 A B2191 -64.794 -2.297 72.507 1.00 15.48 N
ATOM 20 N1 A B2191 -64.197 -4.458 72.126 1.00 15.48 N
ATOM 21 C2 A B2191 -63.285 -5.362 71.781 1.00 15.48 C
ATOM 22 N3 A B2191 -62.015 -5.187 71.455 1.00 15.48 N
ATOM 23 C4 A B2191 -61.697 -3.896 71.485 1.00 15.48 C
ATOM 24 P A B2192 -56.892 -6.896 68.365 1.00 0.58 P
ATOM 25 OP1 A B2192 -55.684 -7.330 69.141 1.00 0.58 O
ATOM 26 OP2 A B2192 -56.710 -6.135 67.092 1.00 0.58 O
ATOM 27 O5' A B2192 -57.837 -8.147 68.111 1.00 0.58 O
TER
ATOM 2 P G A2217 -62.132 0.586 56.777 1.00 0.60 P
ATOM 3 OP1 G A2217 -63.262 0.842 55.887 1.00 0.60 O
ATOM 4 OP2 G A2217 -61.473 1.716 57.433 1.00 0.60 O
ATOM 5 O5' G A2217 -62.524 -0.510 57.863 1.00 0.60 O
ATOM 6 C5' G A2217 -62.437 -1.895 57.548 1.00 0.60 C
ATOM 7 C4' G A2217 -62.574 -2.766 58.769 1.00 0.60 C
ATOM 8 O4' G A2217 -61.299 -2.876 59.442 1.00 0.60 O
ATOM 9 C3' G A2217 -63.518 -2.282 59.854 1.00 0.60 C
ATOM 10 O3' G A2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 11 C2' G A2217 -63.012 -3.041 61.070 1.00 0.60 C
ATOM 12 O2' G A2217 -63.508 -4.368 61.073 1.00 0.60 O
ATOM 13 C1' G A2217 -61.507 -3.100 60.812 1.00 0.60 C
ATOM 14 N9 G A2217 -60.762 -2.085 61.561 1.00 0.93 N
ATOM 15 C8 G A2217 -60.426 -0.878 61.045 1.00 0.93 C
ATOM 16 N7 G A2217 -59.726 -0.133 61.853 1.00 0.93 N
ATOM 17 C5 G A2217 -59.601 -0.917 62.972 1.00 0.93 C
ATOM 18 C6 G A2217 -58.930 -0.617 64.179 1.00 0.93 C
ATOM 19 O6 G A2217 -58.316 0.429 64.489 1.00 0.93 O
ATOM 20 N1 G A2217 -59.014 -1.693 65.054 1.00 0.93 N
ATOM 21 C2 G A2217 -59.655 -2.852 64.806 1.00 0.93 C
ATOM 22 N2 G A2217 -59.600 -3.712 65.810 1.00 0.93 N
ATOM 23 N3 G A2217 -60.286 -3.121 63.693 1.00 0.93 N
ATOM 24 C4 G A2217 -60.220 -2.122 62.811 1.00 0.93 C
ATOM 25 P A A2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 26 OP1 A A2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 27 OP2 A A2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 28 O5' A A2218 -66.285 -2.322 61.626 1.00 7.10 O
TER
ATOM 1 O3' U B2190 -57.995 -0.405 70.131 1.00 2.97 O
ATOM 2 P A B2191 -56.520 -0.964 70.433 1.00 15.31 P
ATOM 3 OP1 A B2191 -55.759 0.154 71.056 1.00 15.31 O
ATOM 4 OP2 A B2191 -56.002 -1.576 69.176 1.00 15.31 O
ATOM 5 O5' A B2191 -56.793 -2.109 71.502 1.00 15.31 O
ATOM 6 C5' A B2191 -56.136 -3.365 71.395 1.00 15.31 C
ATOM 7 C4' A B2191 -57.100 -4.474 71.070 1.00 15.31 C
ATOM 8 O4' A B2191 -58.361 -4.216 71.739 1.00 15.31 O
ATOM 9 C3' A B2191 -57.450 -4.629 69.597 1.00 15.31 C
ATOM 10 O3' A B2191 -57.781 -5.988 69.347 1.00 15.31 O
ATOM 11 C2' A B2191 -58.711 -3.813 69.500 1.00 15.31 C
ATOM 12 O2' A B2191 -59.507 -4.098 68.385 1.00 15.31 O
ATOM 13 C1' A B2191 -59.381 -4.240 70.777 1.00 15.31 C
ATOM 14 N9 A B2191 -60.471 -3.379 71.201 1.00 15.48 N
ATOM 15 C8 A B2191 -60.571 -2.018 71.339 1.00 15.48 C
ATOM 16 N7 A B2191 -61.775 -1.645 71.718 1.00 15.48 N
ATOM 17 C5 A B2191 -62.507 -2.836 71.808 1.00 15.48 C
ATOM 18 C6 A B2191 -63.841 -3.162 72.152 1.00 15.48 C
ATOM 19 N6 A B2191 -64.794 -2.297 72.507 1.00 15.48 N
ATOM 20 N1 A B2191 -64.197 -4.458 72.126 1.00 15.48 N
ATOM 21 C2 A B2191 -63.285 -5.362 71.781 1.00 15.48 C
ATOM 22 N3 A B2191 -62.015 -5.187 71.455 1.00 15.48 N
ATOM 23 C4 A B2191 -61.697 -3.896 71.485 1.00 15.48 C
ATOM 24 P A B2192 -56.892 -6.896 68.365 1.00 0.58 P
ATOM 25 OP1 A B2192 -55.684 -7.330 69.141 1.00 0.58 O
ATOM 26 OP2 A B2192 -56.710 -6.135 67.092 1.00 0.58 O
ATOM 27 O5' A B2192 -57.837 -8.147 68.111 1.00 0.58 O
TER
Atoms:
OP1: (-63.262,0.842,55.887)
OP2: (-61.473,1.716,57.433)
C3': (-63.518,-2.282,59.854)
C1': (-61.507,-3.100,60.812)
C5': (-62.437,-1.895,57.548)
O6: (-58.316,0.429,64.489)
O4': (-61.299,-2.876,59.442)
C8: (-60.426,-0.878,61.045)
C2: (-59.655,-2.852,64.806)
C6: (-58.930,-0.617,64.179)
C5: (-59.601,-0.917,62.972)
C4: (-60.220,-2.122,62.811)
P: (-62.132,0.586,56.777)
C4': (-62.574,-2.766,58.769)
C2': (-63.012,-3.041,61.070)
O2': (-63.508,-4.368,61.073)
N1: (-59.014,-1.693,65.054)
N2: (-59.600,-3.712,65.810)
N3: (-60.286,-3.121,63.693)
N7: (-59.726,-0.133,61.853)
N9: (-60.762,-2.085,61.561)
O5': (-62.524,-0.510,57.863)
O3': (-64.888,-2.530,59.562)
OP2: (-61.473,1.716,57.433)
C3': (-63.518,-2.282,59.854)
C1': (-61.507,-3.100,60.812)
C5': (-62.437,-1.895,57.548)
O6: (-58.316,0.429,64.489)
O4': (-61.299,-2.876,59.442)
C8: (-60.426,-0.878,61.045)
C2: (-59.655,-2.852,64.806)
C6: (-58.930,-0.617,64.179)
C5: (-59.601,-0.917,62.972)
C4: (-60.220,-2.122,62.811)
P: (-62.132,0.586,56.777)
C4': (-62.574,-2.766,58.769)
C2': (-63.012,-3.041,61.070)
O2': (-63.508,-4.368,61.073)
N1: (-59.014,-1.693,65.054)
N2: (-59.600,-3.712,65.810)
N3: (-60.286,-3.121,63.693)
N7: (-59.726,-0.133,61.853)
N9: (-60.762,-2.085,61.561)
O5': (-62.524,-0.510,57.863)
O3': (-64.888,-2.530,59.562)
OP1: (-55.759,0.154,71.056)
OP2: (-56.002,-1.576,69.176)
C3': (-57.450,-4.629,69.597)
C1': (-59.381,-4.240,70.777)
C5': (-56.136,-3.365,71.395)
O4': (-58.361,-4.216,71.739)
C8: (-60.571,-2.018,71.339)
O2': (-59.507,-4.098,68.385)
C6: (-63.841,-3.162,72.152)
C5: (-62.507,-2.836,71.808)
C4: (-61.697,-3.896,71.485)
P: (-56.520,-0.964,70.433)
C4': (-57.100,-4.474,71.070)
C2': (-58.711,-3.813,69.500)
C2: (-63.285,-5.362,71.781)
N1: (-64.197,-4.458,72.126)
N3: (-62.015,-5.187,71.455)
N6: (-64.794,-2.297,72.507)
N7: (-61.775,-1.645,71.718)
N9: (-60.471,-3.379,71.201)
O5': (-56.793,-2.109,71.502)
O3': (-57.781,-5.988,69.347)
OP2: (-56.002,-1.576,69.176)
C3': (-57.450,-4.629,69.597)
C1': (-59.381,-4.240,70.777)
C5': (-56.136,-3.365,71.395)
O4': (-58.361,-4.216,71.739)
C8: (-60.571,-2.018,71.339)
O2': (-59.507,-4.098,68.385)
C6: (-63.841,-3.162,72.152)
C5: (-62.507,-2.836,71.808)
C4: (-61.697,-3.896,71.485)
P: (-56.520,-0.964,70.433)
C4': (-57.100,-4.474,71.070)
C2': (-58.711,-3.813,69.500)
C2: (-63.285,-5.362,71.781)
N1: (-64.197,-4.458,72.126)
N3: (-62.015,-5.187,71.455)
N6: (-64.794,-2.297,72.507)
N7: (-61.775,-1.645,71.718)
N9: (-60.471,-3.379,71.201)
O5': (-56.793,-2.109,71.502)
O3': (-57.781,-5.988,69.347)
Image (generated by PyMOL):