Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2279:A2339
Extra
PDB:
ATOM 1 O3' C A2278 -132.446 -34.074 39.064 1.00 0.01 O
ATOM 2 P G A2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 3 OP1 G A2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 4 OP2 G A2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 5 O5' G A2279 -133.516 -34.147 41.353 1.00 0.71 O
ATOM 6 C5' G A2279 -133.518 -35.317 42.150 1.00 0.71 C
ATOM 7 C4' G A2279 -134.726 -35.436 43.055 1.00 0.71 C
ATOM 8 O4' G A2279 -134.529 -36.545 43.958 1.00 0.71 O
ATOM 9 C3' G A2279 -135.054 -34.233 43.933 1.00 0.71 C
ATOM 10 O3' G A2279 -136.430 -33.907 43.864 1.00 0.71 O
ATOM 11 C2' G A2279 -134.660 -34.646 45.350 1.00 0.71 C
ATOM 12 O2' G A2279 -135.783 -34.597 46.217 1.00 0.71 O
ATOM 13 C1' G A2279 -134.209 -36.097 45.219 1.00 0.71 C
ATOM 14 N9 G A2279 -132.778 -36.221 45.357 1.00 1.18 N
ATOM 15 C8 G A2279 -131.799 -35.355 44.888 1.00 1.18 C
ATOM 16 N7 G A2279 -130.569 -35.733 45.139 1.00 1.18 N
ATOM 17 C5 G A2279 -130.831 -36.911 45.807 1.00 1.18 C
ATOM 18 C6 G A2279 -129.893 -37.765 46.316 1.00 1.18 C
ATOM 19 O6 G A2279 -128.678 -37.620 46.269 1.00 1.18 O
ATOM 20 N1 G A2279 -130.520 -38.845 46.895 1.00 1.18 N
ATOM 21 C2 G A2279 -131.888 -39.064 46.957 1.00 1.18 C
ATOM 22 N2 G A2279 -132.236 -40.234 47.583 1.00 1.18 N
ATOM 23 N3 G A2279 -132.810 -38.231 46.463 1.00 1.18 N
ATOM 24 C4 G A2279 -132.165 -37.227 45.929 1.00 1.18 C
ATOM 25 P A A2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 26 OP1 A A2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 27 OP2 A A2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 28 O5' A A2280 -137.170 -33.167 41.600 1.00 4.04 O
TER
ATOM 1 O3' G B2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 2 P A B2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 3 OP1 A B2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 4 OP2 A B2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 5 O5' A B2339 -134.898 -45.856 47.020 1.00 0.01 O
ATOM 6 C5' A B2339 -134.013 -46.934 46.736 1.00 0.01 C
ATOM 7 C4' A B2339 -132.601 -46.465 46.610 1.00 0.01 C
ATOM 8 O4' A B2339 -132.524 -45.520 45.515 1.00 0.01 O
ATOM 9 C3' A B2339 -132.060 -45.739 47.828 1.00 0.01 C
ATOM 10 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 11 C2' A B2339 -132.187 -44.275 47.424 1.00 0.01 C
ATOM 12 O2' A B2339 -131.290 -43.402 48.061 1.00 0.01 O
ATOM 13 C1' A B2339 -131.889 -44.353 45.960 1.00 0.01 C
ATOM 14 N9 A B2339 -132.371 -43.214 45.185 1.00 0.01 N
ATOM 15 C8 A B2339 -133.598 -42.978 44.669 1.00 0.01 C
ATOM 16 N7 A B2339 -133.672 -41.858 43.997 1.00 0.01 N
ATOM 17 C5 A B2339 -132.404 -41.314 44.058 1.00 0.01 C
ATOM 18 C6 A B2339 -131.824 -40.137 43.551 1.00 0.01 C
ATOM 19 N6 A B2339 -132.421 -39.202 42.827 1.00 0.01 N
ATOM 20 N1 A B2339 -130.546 -39.918 43.806 1.00 0.01 N
ATOM 21 C2 A B2339 -129.901 -40.813 44.531 1.00 0.01 C
ATOM 22 N3 A B2339 -130.326 -41.942 45.064 1.00 0.01 N
ATOM 23 C4 A B2339 -131.606 -42.147 44.789 1.00 0.01 C
ATOM 24 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 25 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 26 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 27 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
TER
ATOM 2 P G A2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 3 OP1 G A2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 4 OP2 G A2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 5 O5' G A2279 -133.516 -34.147 41.353 1.00 0.71 O
ATOM 6 C5' G A2279 -133.518 -35.317 42.150 1.00 0.71 C
ATOM 7 C4' G A2279 -134.726 -35.436 43.055 1.00 0.71 C
ATOM 8 O4' G A2279 -134.529 -36.545 43.958 1.00 0.71 O
ATOM 9 C3' G A2279 -135.054 -34.233 43.933 1.00 0.71 C
ATOM 10 O3' G A2279 -136.430 -33.907 43.864 1.00 0.71 O
ATOM 11 C2' G A2279 -134.660 -34.646 45.350 1.00 0.71 C
ATOM 12 O2' G A2279 -135.783 -34.597 46.217 1.00 0.71 O
ATOM 13 C1' G A2279 -134.209 -36.097 45.219 1.00 0.71 C
ATOM 14 N9 G A2279 -132.778 -36.221 45.357 1.00 1.18 N
ATOM 15 C8 G A2279 -131.799 -35.355 44.888 1.00 1.18 C
ATOM 16 N7 G A2279 -130.569 -35.733 45.139 1.00 1.18 N
ATOM 17 C5 G A2279 -130.831 -36.911 45.807 1.00 1.18 C
ATOM 18 C6 G A2279 -129.893 -37.765 46.316 1.00 1.18 C
ATOM 19 O6 G A2279 -128.678 -37.620 46.269 1.00 1.18 O
ATOM 20 N1 G A2279 -130.520 -38.845 46.895 1.00 1.18 N
ATOM 21 C2 G A2279 -131.888 -39.064 46.957 1.00 1.18 C
ATOM 22 N2 G A2279 -132.236 -40.234 47.583 1.00 1.18 N
ATOM 23 N3 G A2279 -132.810 -38.231 46.463 1.00 1.18 N
ATOM 24 C4 G A2279 -132.165 -37.227 45.929 1.00 1.18 C
ATOM 25 P A A2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 26 OP1 A A2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 27 OP2 A A2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 28 O5' A A2280 -137.170 -33.167 41.600 1.00 4.04 O
TER
ATOM 1 O3' G B2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 2 P A B2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 3 OP1 A B2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 4 OP2 A B2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 5 O5' A B2339 -134.898 -45.856 47.020 1.00 0.01 O
ATOM 6 C5' A B2339 -134.013 -46.934 46.736 1.00 0.01 C
ATOM 7 C4' A B2339 -132.601 -46.465 46.610 1.00 0.01 C
ATOM 8 O4' A B2339 -132.524 -45.520 45.515 1.00 0.01 O
ATOM 9 C3' A B2339 -132.060 -45.739 47.828 1.00 0.01 C
ATOM 10 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 11 C2' A B2339 -132.187 -44.275 47.424 1.00 0.01 C
ATOM 12 O2' A B2339 -131.290 -43.402 48.061 1.00 0.01 O
ATOM 13 C1' A B2339 -131.889 -44.353 45.960 1.00 0.01 C
ATOM 14 N9 A B2339 -132.371 -43.214 45.185 1.00 0.01 N
ATOM 15 C8 A B2339 -133.598 -42.978 44.669 1.00 0.01 C
ATOM 16 N7 A B2339 -133.672 -41.858 43.997 1.00 0.01 N
ATOM 17 C5 A B2339 -132.404 -41.314 44.058 1.00 0.01 C
ATOM 18 C6 A B2339 -131.824 -40.137 43.551 1.00 0.01 C
ATOM 19 N6 A B2339 -132.421 -39.202 42.827 1.00 0.01 N
ATOM 20 N1 A B2339 -130.546 -39.918 43.806 1.00 0.01 N
ATOM 21 C2 A B2339 -129.901 -40.813 44.531 1.00 0.01 C
ATOM 22 N3 A B2339 -130.326 -41.942 45.064 1.00 0.01 N
ATOM 23 C4 A B2339 -131.606 -42.147 44.789 1.00 0.01 C
ATOM 24 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 25 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 26 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 27 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
TER
Atoms:
OP1: (-132.057,-32.200,40.635)
OP2: (-131.015,-34.489,41.041)
C3': (-135.054,-34.233,43.933)
C1': (-134.209,-36.097,45.219)
C5': (-133.518,-35.317,42.150)
O6: (-128.678,-37.620,46.269)
O4': (-134.529,-36.545,43.958)
C8: (-131.799,-35.355,44.888)
C2: (-131.888,-39.064,46.957)
C6: (-129.893,-37.765,46.316)
C5: (-130.831,-36.911,45.807)
C4: (-132.165,-37.227,45.929)
P: (-132.173,-33.676,40.592)
C4': (-134.726,-35.436,43.055)
C2': (-134.660,-34.646,45.350)
O2': (-135.783,-34.597,46.217)
N1: (-130.520,-38.845,46.895)
N2: (-132.236,-40.234,47.583)
N3: (-132.810,-38.231,46.463)
N7: (-130.569,-35.733,45.139)
N9: (-132.778,-36.221,45.357)
O5': (-133.516,-34.147,41.353)
O3': (-136.430,-33.907,43.864)
OP2: (-131.015,-34.489,41.041)
C3': (-135.054,-34.233,43.933)
C1': (-134.209,-36.097,45.219)
C5': (-133.518,-35.317,42.150)
O6: (-128.678,-37.620,46.269)
O4': (-134.529,-36.545,43.958)
C8: (-131.799,-35.355,44.888)
C2: (-131.888,-39.064,46.957)
C6: (-129.893,-37.765,46.316)
C5: (-130.831,-36.911,45.807)
C4: (-132.165,-37.227,45.929)
P: (-132.173,-33.676,40.592)
C4': (-134.726,-35.436,43.055)
C2': (-134.660,-34.646,45.350)
O2': (-135.783,-34.597,46.217)
N1: (-130.520,-38.845,46.895)
N2: (-132.236,-40.234,47.583)
N3: (-132.810,-38.231,46.463)
N7: (-130.569,-35.733,45.139)
N9: (-132.778,-36.221,45.357)
O5': (-133.516,-34.147,41.353)
O3': (-136.430,-33.907,43.864)
OP1: (-137.048,-44.603,46.839)
OP2: (-136.435,-46.327,45.079)
C3': (-132.060,-45.739,47.828)
C1': (-131.889,-44.353,45.960)
C5': (-134.013,-46.934,46.736)
O4': (-132.524,-45.520,45.515)
C8: (-133.598,-42.978,44.669)
O2': (-131.290,-43.402,48.061)
C6: (-131.824,-40.137,43.551)
C5: (-132.404,-41.314,44.058)
C4: (-131.606,-42.147,44.789)
P: (-136.400,-45.871,46.489)
C4': (-132.601,-46.465,46.610)
C2': (-132.187,-44.275,47.424)
C2: (-129.901,-40.813,44.531)
N1: (-130.546,-39.918,43.806)
N3: (-130.326,-41.942,45.064)
N6: (-132.421,-39.202,42.827)
N7: (-133.672,-41.858,43.997)
N9: (-132.371,-43.214,45.185)
O5': (-134.898,-45.856,47.020)
O3': (-130.682,-46.062,48.007)
OP2: (-136.435,-46.327,45.079)
C3': (-132.060,-45.739,47.828)
C1': (-131.889,-44.353,45.960)
C5': (-134.013,-46.934,46.736)
O4': (-132.524,-45.520,45.515)
C8: (-133.598,-42.978,44.669)
O2': (-131.290,-43.402,48.061)
C6: (-131.824,-40.137,43.551)
C5: (-132.404,-41.314,44.058)
C4: (-131.606,-42.147,44.789)
P: (-136.400,-45.871,46.489)
C4': (-132.601,-46.465,46.610)
C2': (-132.187,-44.275,47.424)
C2: (-129.901,-40.813,44.531)
N1: (-130.546,-39.918,43.806)
N3: (-130.326,-41.942,45.064)
N6: (-132.421,-39.202,42.827)
N7: (-133.672,-41.858,43.997)
N9: (-132.371,-43.214,45.185)
O5': (-134.898,-45.856,47.020)
O3': (-130.682,-46.062,48.007)
Image (generated by PyMOL):