Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A475:A478
Extra
PDB:
ATOM 1 O3' C A 474 -38.272-100.239 33.932 1.00 0.01 O
ATOM 2 P G A 475 -39.029-100.857 35.191 1.00 0.01 P
ATOM 3 OP1 G A 475 -40.103-101.710 34.675 1.00 0.01 O
ATOM 4 OP2 G A 475 -39.370 -99.734 36.091 1.00 0.01 O
ATOM 5 O5' G A 475 -37.918-101.756 35.849 1.00 0.01 O
ATOM 6 C5' G A 475 -37.353-102.828 35.125 1.00 0.01 C
ATOM 7 C4' G A 475 -36.120-103.342 35.797 1.00 0.01 C
ATOM 8 O4' G A 475 -35.051-102.382 35.638 1.00 0.01 O
ATOM 9 C3' G A 475 -36.223-103.517 37.288 1.00 0.01 C
ATOM 10 O3' G A 475 -36.901-104.697 37.666 1.00 0.01 O
ATOM 11 C2' G A 475 -34.767-103.458 37.735 1.00 0.01 C
ATOM 12 O2' G A 475 -34.136-104.718 37.620 1.00 0.01 O
ATOM 13 C1' G A 475 -34.154-102.491 36.712 1.00 0.01 C
ATOM 14 N9 G A 475 -33.939-101.164 37.298 1.00 0.04 N
ATOM 15 C8 G A 475 -34.821-100.164 37.513 1.00 0.04 C
ATOM 16 N7 G A 475 -34.271 -99.157 38.129 1.00 0.04 N
ATOM 17 C5 G A 475 -32.951 -99.523 38.358 1.00 0.04 C
ATOM 18 C6 G A 475 -31.842 -98.871 38.995 1.00 0.04 C
ATOM 19 O6 G A 475 -31.729 -97.745 39.536 1.00 0.04 O
ATOM 20 N1 G A 475 -30.706 -99.656 38.970 1.00 0.04 N
ATOM 21 C2 G A 475 -30.620-100.886 38.420 1.00 0.04 C
ATOM 22 N2 G A 475 -29.433-101.479 38.517 1.00 0.04 N
ATOM 23 N3 G A 475 -31.623-101.491 37.829 1.00 0.04 N
ATOM 24 C4 G A 475 -32.752-100.762 37.840 1.00 0.04 C
ATOM 25 P A A 476 -37.723-104.719 39.037 1.00 0.01 P
ATOM 26 OP1 A A 476 -37.867-106.124 39.455 1.00 0.01 O
ATOM 27 OP2 A A 476 -38.936-103.912 38.839 1.00 0.01 O
ATOM 28 O5' A A 476 -36.739-103.975 40.020 1.00 0.01 O
TER
ATOM 1 O3' A B 477 -28.528-101.079 42.730 1.00 0.01 O
ATOM 2 P A B 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A B 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A B 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A B 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A B 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A B 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A B 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A B 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A B 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A B 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A B 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A B 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A B 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A B 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A B 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A B 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A B 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A B 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A B 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A B 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A B 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A B 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A B 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A B 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A B 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A B 479 -23.348-102.063 37.820 1.00 0.01 O
TER
ATOM 2 P G A 475 -39.029-100.857 35.191 1.00 0.01 P
ATOM 3 OP1 G A 475 -40.103-101.710 34.675 1.00 0.01 O
ATOM 4 OP2 G A 475 -39.370 -99.734 36.091 1.00 0.01 O
ATOM 5 O5' G A 475 -37.918-101.756 35.849 1.00 0.01 O
ATOM 6 C5' G A 475 -37.353-102.828 35.125 1.00 0.01 C
ATOM 7 C4' G A 475 -36.120-103.342 35.797 1.00 0.01 C
ATOM 8 O4' G A 475 -35.051-102.382 35.638 1.00 0.01 O
ATOM 9 C3' G A 475 -36.223-103.517 37.288 1.00 0.01 C
ATOM 10 O3' G A 475 -36.901-104.697 37.666 1.00 0.01 O
ATOM 11 C2' G A 475 -34.767-103.458 37.735 1.00 0.01 C
ATOM 12 O2' G A 475 -34.136-104.718 37.620 1.00 0.01 O
ATOM 13 C1' G A 475 -34.154-102.491 36.712 1.00 0.01 C
ATOM 14 N9 G A 475 -33.939-101.164 37.298 1.00 0.04 N
ATOM 15 C8 G A 475 -34.821-100.164 37.513 1.00 0.04 C
ATOM 16 N7 G A 475 -34.271 -99.157 38.129 1.00 0.04 N
ATOM 17 C5 G A 475 -32.951 -99.523 38.358 1.00 0.04 C
ATOM 18 C6 G A 475 -31.842 -98.871 38.995 1.00 0.04 C
ATOM 19 O6 G A 475 -31.729 -97.745 39.536 1.00 0.04 O
ATOM 20 N1 G A 475 -30.706 -99.656 38.970 1.00 0.04 N
ATOM 21 C2 G A 475 -30.620-100.886 38.420 1.00 0.04 C
ATOM 22 N2 G A 475 -29.433-101.479 38.517 1.00 0.04 N
ATOM 23 N3 G A 475 -31.623-101.491 37.829 1.00 0.04 N
ATOM 24 C4 G A 475 -32.752-100.762 37.840 1.00 0.04 C
ATOM 25 P A A 476 -37.723-104.719 39.037 1.00 0.01 P
ATOM 26 OP1 A A 476 -37.867-106.124 39.455 1.00 0.01 O
ATOM 27 OP2 A A 476 -38.936-103.912 38.839 1.00 0.01 O
ATOM 28 O5' A A 476 -36.739-103.975 40.020 1.00 0.01 O
TER
ATOM 1 O3' A B 477 -28.528-101.079 42.730 1.00 0.01 O
ATOM 2 P A B 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A B 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A B 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A B 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A B 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A B 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A B 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A B 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A B 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A B 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A B 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A B 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A B 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A B 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A B 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A B 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A B 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A B 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A B 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A B 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A B 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A B 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A B 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A B 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A B 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A B 479 -23.348-102.063 37.820 1.00 0.01 O
TER
Atoms:
OP1: (-40.103,-101.710,34.675)
OP2: (-39.370,-99.734,36.091)
C3': (-36.223,-103.517,37.288)
C1': (-34.154,-102.491,36.712)
C5': (-37.353,-102.828,35.125)
O6: (-31.729,-97.745,39.536)
O4': (-35.051,-102.382,35.638)
C8: (-34.821,-100.164,37.513)
C2: (-30.620,-100.886,38.420)
C6: (-31.842,-98.871,38.995)
C5: (-32.951,-99.523,38.358)
C4: (-32.752,-100.762,37.840)
P: (-39.029,-100.857,35.191)
C4': (-36.120,-103.342,35.797)
C2': (-34.767,-103.458,37.735)
O2': (-34.136,-104.718,37.620)
N1: (-30.706,-99.656,38.970)
N2: (-29.433,-101.479,38.517)
N3: (-31.623,-101.491,37.829)
N7: (-34.271,-99.157,38.129)
N9: (-33.939,-101.164,37.298)
O5': (-37.918,-101.756,35.849)
O3': (-36.901,-104.697,37.666)
OP2: (-39.370,-99.734,36.091)
C3': (-36.223,-103.517,37.288)
C1': (-34.154,-102.491,36.712)
C5': (-37.353,-102.828,35.125)
O6: (-31.729,-97.745,39.536)
O4': (-35.051,-102.382,35.638)
C8: (-34.821,-100.164,37.513)
C2: (-30.620,-100.886,38.420)
C6: (-31.842,-98.871,38.995)
C5: (-32.951,-99.523,38.358)
C4: (-32.752,-100.762,37.840)
P: (-39.029,-100.857,35.191)
C4': (-36.120,-103.342,35.797)
C2': (-34.767,-103.458,37.735)
O2': (-34.136,-104.718,37.620)
N1: (-30.706,-99.656,38.970)
N2: (-29.433,-101.479,38.517)
N3: (-31.623,-101.491,37.829)
N7: (-34.271,-99.157,38.129)
N9: (-33.939,-101.164,37.298)
O5': (-37.918,-101.756,35.849)
O3': (-36.901,-104.697,37.666)
OP1: (-27.421,-98.877,42.878)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
Image (generated by PyMOL):