Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2466:238
Extra
PDB:
ATOM 1 O3' U A 465 -63.067 45.411 35.557 1.00 85.46 O
ATOM 2 P G A 466 -64.273 44.426 35.960 1.00 87.43 P
ATOM 3 OP1 G A 466 -63.890 43.065 35.519 1.00 87.28 O
ATOM 4 OP2 G A 466 -65.536 45.030 35.422 1.00 88.66 O
ATOM 5 O5' G A 466 -64.269 44.503 37.557 1.00 86.41 O
ATOM 6 C5' G A 466 -63.864 43.394 38.349 1.00 85.50 C
ATOM 7 C4' G A 466 -64.220 43.605 39.794 1.00 84.85 C
ATOM 8 O4' G A 466 -64.064 45.009 40.117 1.00 84.79 O
ATOM 9 C3' G A 466 -65.664 43.312 40.173 1.00 85.44 C
ATOM 10 O3' G A 466 -65.932 41.932 40.364 1.00 85.29 O
ATOM 11 C2' G A 466 -65.857 44.165 41.418 1.00 84.95 C
ATOM 12 O2' G A 466 -65.228 43.570 42.538 1.00 83.84 O
ATOM 13 C1' G A 466 -65.069 45.411 41.033 1.00 84.92 C
ATOM 14 N9 G A 466 -65.928 46.419 40.381 1.00 86.01 N
ATOM 15 C8 G A 466 -66.229 46.507 39.049 1.00 87.02 C
ATOM 16 N7 G A 466 -67.030 47.499 38.773 1.00 87.89 N
ATOM 17 C5 G A 466 -67.274 48.105 39.987 1.00 87.42 C
ATOM 18 C6 G A 466 -68.071 49.229 40.305 1.00 87.98 C
ATOM 19 O6 G A 466 -68.718 49.911 39.531 1.00 89.03 O
ATOM 20 N1 G A 466 -68.068 49.540 41.659 1.00 87.24 N
ATOM 21 C2 G A 466 -67.355 48.824 42.598 1.00 86.08 C
ATOM 22 N2 G A 466 -67.436 49.239 43.878 1.00 85.50 N
ATOM 23 N3 G A 466 -66.595 47.766 42.304 1.00 85.55 N
ATOM 24 C4 G A 466 -66.601 47.453 40.991 1.00 86.26 C
ATOM 25 P A A 467 -66.549 41.059 39.158 1.00 86.65 P
ATOM 26 OP1 A A 467 -65.467 40.163 38.672 1.00 86.18 O
ATOM 27 OP2 A A 467 -67.182 42.016 38.200 1.00 87.77 O
ATOM 28 O5' A A 467 -67.673 40.202 39.880 1.00 86.80 O
TER
ATOM 1 O3' C B 37 -74.896 53.392 47.728 1.00 90.76 O
ATOM 2 P A B 38 -73.588 54.170 47.210 1.00 99.41 P
ATOM 3 OP1 A B 38 -73.670 55.546 47.743 1.00 99.59 O
ATOM 4 OP2 A B 38 -73.502 53.977 45.745 1.00100.08 O
ATOM 5 O5' A B 38 -72.401 53.384 47.922 1.00 98.00 O
ATOM 6 C5' A B 38 -72.620 52.128 48.561 1.00 97.49 C
ATOM 7 C4' A B 38 -71.424 51.235 48.430 1.00 96.51 C
ATOM 8 O4' A B 38 -71.701 50.189 47.447 1.00 96.95 O
ATOM 9 C3' A B 38 -70.164 51.955 47.955 1.00 96.09 C
ATOM 10 O3' A B 38 -69.035 51.485 48.661 1.00 94.89 O
ATOM 11 C2' A B 38 -70.056 51.548 46.496 1.00 96.67 C
ATOM 12 O2' A B 38 -68.746 51.572 45.967 1.00 96.10 O
ATOM 13 C1' A B 38 -70.629 50.137 46.527 1.00 96.69 C
ATOM 14 N9 A B 38 -71.108 49.690 45.219 1.00 97.61 N
ATOM 15 C8 A B 38 -71.895 50.391 44.336 1.00 98.80 C
ATOM 16 N7 A B 38 -72.067 49.773 43.195 1.00 99.42 N
ATOM 17 C5 A B 38 -71.311 48.612 43.327 1.00 98.56 C
ATOM 18 C6 A B 38 -71.078 47.525 42.466 1.00 98.67 C
ATOM 19 N6 A B 38 -71.621 47.458 41.246 1.00 99.74 N
ATOM 20 N1 A B 38 -70.267 46.522 42.906 1.00 97.67 N
ATOM 21 C2 A B 38 -69.742 46.607 44.126 1.00 96.65 C
ATOM 22 N3 A B 38 -69.899 47.576 45.022 1.00 96.46 N
ATOM 23 C4 A B 38 -70.696 48.556 44.562 1.00 97.44 C
ATOM 24 P A B 39 -67.847 52.514 48.999 1.00 80.30 P
ATOM 25 OP1 A B 39 -68.438 53.597 49.831 1.00 80.55 O
ATOM 26 OP2 A B 39 -67.190 52.884 47.705 1.00 80.63 O
ATOM 27 O5' A B 39 -66.858 51.617 49.880 1.00 79.03 O
TER
ATOM 2 P G A 466 -64.273 44.426 35.960 1.00 87.43 P
ATOM 3 OP1 G A 466 -63.890 43.065 35.519 1.00 87.28 O
ATOM 4 OP2 G A 466 -65.536 45.030 35.422 1.00 88.66 O
ATOM 5 O5' G A 466 -64.269 44.503 37.557 1.00 86.41 O
ATOM 6 C5' G A 466 -63.864 43.394 38.349 1.00 85.50 C
ATOM 7 C4' G A 466 -64.220 43.605 39.794 1.00 84.85 C
ATOM 8 O4' G A 466 -64.064 45.009 40.117 1.00 84.79 O
ATOM 9 C3' G A 466 -65.664 43.312 40.173 1.00 85.44 C
ATOM 10 O3' G A 466 -65.932 41.932 40.364 1.00 85.29 O
ATOM 11 C2' G A 466 -65.857 44.165 41.418 1.00 84.95 C
ATOM 12 O2' G A 466 -65.228 43.570 42.538 1.00 83.84 O
ATOM 13 C1' G A 466 -65.069 45.411 41.033 1.00 84.92 C
ATOM 14 N9 G A 466 -65.928 46.419 40.381 1.00 86.01 N
ATOM 15 C8 G A 466 -66.229 46.507 39.049 1.00 87.02 C
ATOM 16 N7 G A 466 -67.030 47.499 38.773 1.00 87.89 N
ATOM 17 C5 G A 466 -67.274 48.105 39.987 1.00 87.42 C
ATOM 18 C6 G A 466 -68.071 49.229 40.305 1.00 87.98 C
ATOM 19 O6 G A 466 -68.718 49.911 39.531 1.00 89.03 O
ATOM 20 N1 G A 466 -68.068 49.540 41.659 1.00 87.24 N
ATOM 21 C2 G A 466 -67.355 48.824 42.598 1.00 86.08 C
ATOM 22 N2 G A 466 -67.436 49.239 43.878 1.00 85.50 N
ATOM 23 N3 G A 466 -66.595 47.766 42.304 1.00 85.55 N
ATOM 24 C4 G A 466 -66.601 47.453 40.991 1.00 86.26 C
ATOM 25 P A A 467 -66.549 41.059 39.158 1.00 86.65 P
ATOM 26 OP1 A A 467 -65.467 40.163 38.672 1.00 86.18 O
ATOM 27 OP2 A A 467 -67.182 42.016 38.200 1.00 87.77 O
ATOM 28 O5' A A 467 -67.673 40.202 39.880 1.00 86.80 O
TER
ATOM 1 O3' C B 37 -74.896 53.392 47.728 1.00 90.76 O
ATOM 2 P A B 38 -73.588 54.170 47.210 1.00 99.41 P
ATOM 3 OP1 A B 38 -73.670 55.546 47.743 1.00 99.59 O
ATOM 4 OP2 A B 38 -73.502 53.977 45.745 1.00100.08 O
ATOM 5 O5' A B 38 -72.401 53.384 47.922 1.00 98.00 O
ATOM 6 C5' A B 38 -72.620 52.128 48.561 1.00 97.49 C
ATOM 7 C4' A B 38 -71.424 51.235 48.430 1.00 96.51 C
ATOM 8 O4' A B 38 -71.701 50.189 47.447 1.00 96.95 O
ATOM 9 C3' A B 38 -70.164 51.955 47.955 1.00 96.09 C
ATOM 10 O3' A B 38 -69.035 51.485 48.661 1.00 94.89 O
ATOM 11 C2' A B 38 -70.056 51.548 46.496 1.00 96.67 C
ATOM 12 O2' A B 38 -68.746 51.572 45.967 1.00 96.10 O
ATOM 13 C1' A B 38 -70.629 50.137 46.527 1.00 96.69 C
ATOM 14 N9 A B 38 -71.108 49.690 45.219 1.00 97.61 N
ATOM 15 C8 A B 38 -71.895 50.391 44.336 1.00 98.80 C
ATOM 16 N7 A B 38 -72.067 49.773 43.195 1.00 99.42 N
ATOM 17 C5 A B 38 -71.311 48.612 43.327 1.00 98.56 C
ATOM 18 C6 A B 38 -71.078 47.525 42.466 1.00 98.67 C
ATOM 19 N6 A B 38 -71.621 47.458 41.246 1.00 99.74 N
ATOM 20 N1 A B 38 -70.267 46.522 42.906 1.00 97.67 N
ATOM 21 C2 A B 38 -69.742 46.607 44.126 1.00 96.65 C
ATOM 22 N3 A B 38 -69.899 47.576 45.022 1.00 96.46 N
ATOM 23 C4 A B 38 -70.696 48.556 44.562 1.00 97.44 C
ATOM 24 P A B 39 -67.847 52.514 48.999 1.00 80.30 P
ATOM 25 OP1 A B 39 -68.438 53.597 49.831 1.00 80.55 O
ATOM 26 OP2 A B 39 -67.190 52.884 47.705 1.00 80.63 O
ATOM 27 O5' A B 39 -66.858 51.617 49.880 1.00 79.03 O
TER
Atoms:
OP1: (-63.890,43.065,35.519)
OP2: (-65.536,45.030,35.422)
C3': (-65.664,43.312,40.173)
C1': (-65.069,45.411,41.033)
C5': (-63.864,43.394,38.349)
O6: (-68.718,49.911,39.531)
O4': (-64.064,45.009,40.117)
C8: (-66.229,46.507,39.049)
C2: (-67.355,48.824,42.598)
C6: (-68.071,49.229,40.305)
C5: (-67.274,48.105,39.987)
C4: (-66.601,47.453,40.991)
P: (-64.273,44.426,35.960)
C4': (-64.220,43.605,39.794)
C2': (-65.857,44.165,41.418)
O2': (-65.228,43.570,42.538)
N1: (-68.068,49.540,41.659)
N2: (-67.436,49.239,43.878)
N3: (-66.595,47.766,42.304)
N7: (-67.030,47.499,38.773)
N9: (-65.928,46.419,40.381)
O5': (-64.269,44.503,37.557)
O3': (-65.932,41.932,40.364)
OP2: (-65.536,45.030,35.422)
C3': (-65.664,43.312,40.173)
C1': (-65.069,45.411,41.033)
C5': (-63.864,43.394,38.349)
O6: (-68.718,49.911,39.531)
O4': (-64.064,45.009,40.117)
C8: (-66.229,46.507,39.049)
C2: (-67.355,48.824,42.598)
C6: (-68.071,49.229,40.305)
C5: (-67.274,48.105,39.987)
C4: (-66.601,47.453,40.991)
P: (-64.273,44.426,35.960)
C4': (-64.220,43.605,39.794)
C2': (-65.857,44.165,41.418)
O2': (-65.228,43.570,42.538)
N1: (-68.068,49.540,41.659)
N2: (-67.436,49.239,43.878)
N3: (-66.595,47.766,42.304)
N7: (-67.030,47.499,38.773)
N9: (-65.928,46.419,40.381)
O5': (-64.269,44.503,37.557)
O3': (-65.932,41.932,40.364)
OP1: (-73.670,55.546,47.743)
OP2: (-73.502,53.977,45.745)
C3': (-70.164,51.955,47.955)
C1': (-70.629,50.137,46.527)
C5': (-72.620,52.128,48.561)
O4': (-71.701,50.189,47.447)
C8: (-71.895,50.391,44.336)
O2': (-68.746,51.572,45.967)
C6: (-71.078,47.525,42.466)
C5: (-71.311,48.612,43.327)
C4: (-70.696,48.556,44.562)
P: (-73.588,54.170,47.210)
C4': (-71.424,51.235,48.430)
C2': (-70.056,51.548,46.496)
C2: (-69.742,46.607,44.126)
N1: (-70.267,46.522,42.906)
N3: (-69.899,47.576,45.022)
N6: (-71.621,47.458,41.246)
N7: (-72.067,49.773,43.195)
N9: (-71.108,49.690,45.219)
O5': (-72.401,53.384,47.922)
O3': (-69.035,51.485,48.661)
OP2: (-73.502,53.977,45.745)
C3': (-70.164,51.955,47.955)
C1': (-70.629,50.137,46.527)
C5': (-72.620,52.128,48.561)
O4': (-71.701,50.189,47.447)
C8: (-71.895,50.391,44.336)
O2': (-68.746,51.572,45.967)
C6: (-71.078,47.525,42.466)
C5: (-71.311,48.612,43.327)
C4: (-70.696,48.556,44.562)
P: (-73.588,54.170,47.210)
C4': (-71.424,51.235,48.430)
C2': (-70.056,51.548,46.496)
C2: (-69.742,46.607,44.126)
N1: (-70.267,46.522,42.906)
N3: (-69.899,47.576,45.022)
N6: (-71.621,47.458,41.246)
N7: (-72.067,49.773,43.195)
N9: (-71.108,49.690,45.219)
O5': (-72.401,53.384,47.922)
O3': (-69.035,51.485,48.661)
Image (generated by PyMOL):