Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11373:1341
Extra
PDB:
ATOM 1 O3' A A1372 73.289 -14.046 83.848 1.00 37.52 O
ATOM 2 P G A1373 72.563 -14.203 85.249 1.00 34.71 P
ATOM 3 OP1 G A1373 73.509 -13.787 86.294 1.00 35.00 O
ATOM 4 OP2 G A1373 71.983 -15.555 85.330 1.00 34.69 O
ATOM 5 O5' G A1373 71.434 -13.154 85.082 1.00 34.48 O
ATOM 6 C5' G A1373 70.625 -13.238 83.942 1.00 34.21 C
ATOM 7 C4' G A1373 70.138 -11.907 83.495 1.00 34.04 C
ATOM 8 O4' G A1373 69.755 -11.130 84.632 1.00 34.12 O
ATOM 9 C3' G A1373 71.124 -11.074 82.738 1.00 34.06 C
ATOM 10 O3' G A1373 70.409 -10.246 81.822 1.00 33.83 O
ATOM 11 C2' G A1373 71.693 -10.206 83.798 1.00 34.27 C
ATOM 12 O2' G A1373 72.232 -9.032 83.269 1.00 34.27 O
ATOM 13 C1' G A1373 70.436 -9.927 84.609 1.00 34.20 C
ATOM 14 N9 G A1373 70.650 -9.524 85.986 1.00 34.43 N
ATOM 15 C8 G A1373 71.545 -10.102 86.788 1.00 34.69 C
ATOM 16 N7 G A1373 71.535 -9.560 87.953 1.00 34.86 N
ATOM 17 C5 G A1373 70.571 -8.592 87.922 1.00 34.71 C
ATOM 18 C6 G A1373 70.170 -7.724 88.948 1.00 34.83 C
ATOM 19 O6 G A1373 70.551 -7.640 90.118 1.00 35.09 O
ATOM 20 N1 G A1373 69.179 -6.887 88.519 1.00 34.62 N
ATOM 21 C2 G A1373 68.666 -6.904 87.271 1.00 34.35 C
ATOM 22 N2 G A1373 67.718 -5.973 87.156 1.00 34.22 N
ATOM 23 N3 G A1373 69.038 -7.734 86.289 1.00 34.24 N
ATOM 24 C4 G A1373 69.994 -8.560 86.703 1.00 34.44 C
ATOM 25 P U A1374 70.494 -10.556 80.269 1.00 31.10 P
ATOM 26 OP1 U A1374 69.654 -9.700 79.621 1.00 30.90 O
ATOM 27 OP2 U A1374 70.270 -12.018 80.083 1.00 31.08 O
ATOM 28 O5' U A1374 71.991 -10.157 79.903 1.00 31.26 O
TER
ATOM 1 O3' U B 340 65.915 2.263 88.206 1.00 35.79 O
ATOM 2 P A B 341 65.994 0.810 88.845 1.00 35.06 P
ATOM 3 OP1 A B 341 65.034 -0.064 88.033 1.00 34.77 O
ATOM 4 OP2 A B 341 65.776 0.962 90.308 1.00 35.30 O
ATOM 5 O5' A B 341 67.480 0.374 88.583 1.00 35.18 O
ATOM 6 C5' A B 341 67.783 -0.634 87.659 1.00 35.01 C
ATOM 7 C4' A B 341 69.045 -1.320 88.024 1.00 35.21 C
ATOM 8 O4' A B 341 70.061 -0.332 88.308 1.00 35.44 O
ATOM 9 C3' A B 341 68.976 -2.131 89.269 1.00 35.37 C
ATOM 10 O3' A B 341 68.441 -3.404 89.041 1.00 35.22 O
ATOM 11 C2' A B 341 70.423 -2.162 89.724 1.00 35.65 C
ATOM 12 O2' A B 341 71.142 -3.100 88.949 1.00 35.59 O
ATOM 13 C1' A B 341 70.884 -0.768 89.343 1.00 35.71 C
ATOM 14 N9 A B 341 70.762 0.188 90.449 1.00 35.94 N
ATOM 15 C8 A B 341 69.885 1.196 90.528 1.00 35.89 C
ATOM 16 N7 A B 341 70.020 1.887 91.604 1.00 36.15 N
ATOM 17 C5 A B 341 71.118 1.344 92.276 1.00 36.40 C
ATOM 18 C6 A B 341 71.812 1.621 93.500 1.00 36.77 C
ATOM 19 N6 A B 341 71.513 2.570 94.371 1.00 36.96 N
ATOM 20 N1 A B 341 72.857 0.861 93.862 1.00 36.95 N
ATOM 21 C2 A B 341 73.211 -0.122 93.053 1.00 36.79 C
ATOM 22 N3 A B 341 72.674 -0.470 91.894 1.00 36.46 N
ATOM 23 C4 A B 341 71.598 0.293 91.549 1.00 36.27 C
ATOM 24 P G B 342 67.674 -4.106 90.221 1.00 36.29 P
ATOM 25 OP1 G B 342 67.394 -5.539 89.835 1.00 36.15 O
ATOM 26 OP2 G B 342 66.609 -3.256 90.528 1.00 36.23 O
ATOM 27 O5' G B 342 68.728 -3.994 91.416 1.00 36.65 O
TER
ATOM 2 P G A1373 72.563 -14.203 85.249 1.00 34.71 P
ATOM 3 OP1 G A1373 73.509 -13.787 86.294 1.00 35.00 O
ATOM 4 OP2 G A1373 71.983 -15.555 85.330 1.00 34.69 O
ATOM 5 O5' G A1373 71.434 -13.154 85.082 1.00 34.48 O
ATOM 6 C5' G A1373 70.625 -13.238 83.942 1.00 34.21 C
ATOM 7 C4' G A1373 70.138 -11.907 83.495 1.00 34.04 C
ATOM 8 O4' G A1373 69.755 -11.130 84.632 1.00 34.12 O
ATOM 9 C3' G A1373 71.124 -11.074 82.738 1.00 34.06 C
ATOM 10 O3' G A1373 70.409 -10.246 81.822 1.00 33.83 O
ATOM 11 C2' G A1373 71.693 -10.206 83.798 1.00 34.27 C
ATOM 12 O2' G A1373 72.232 -9.032 83.269 1.00 34.27 O
ATOM 13 C1' G A1373 70.436 -9.927 84.609 1.00 34.20 C
ATOM 14 N9 G A1373 70.650 -9.524 85.986 1.00 34.43 N
ATOM 15 C8 G A1373 71.545 -10.102 86.788 1.00 34.69 C
ATOM 16 N7 G A1373 71.535 -9.560 87.953 1.00 34.86 N
ATOM 17 C5 G A1373 70.571 -8.592 87.922 1.00 34.71 C
ATOM 18 C6 G A1373 70.170 -7.724 88.948 1.00 34.83 C
ATOM 19 O6 G A1373 70.551 -7.640 90.118 1.00 35.09 O
ATOM 20 N1 G A1373 69.179 -6.887 88.519 1.00 34.62 N
ATOM 21 C2 G A1373 68.666 -6.904 87.271 1.00 34.35 C
ATOM 22 N2 G A1373 67.718 -5.973 87.156 1.00 34.22 N
ATOM 23 N3 G A1373 69.038 -7.734 86.289 1.00 34.24 N
ATOM 24 C4 G A1373 69.994 -8.560 86.703 1.00 34.44 C
ATOM 25 P U A1374 70.494 -10.556 80.269 1.00 31.10 P
ATOM 26 OP1 U A1374 69.654 -9.700 79.621 1.00 30.90 O
ATOM 27 OP2 U A1374 70.270 -12.018 80.083 1.00 31.08 O
ATOM 28 O5' U A1374 71.991 -10.157 79.903 1.00 31.26 O
TER
ATOM 1 O3' U B 340 65.915 2.263 88.206 1.00 35.79 O
ATOM 2 P A B 341 65.994 0.810 88.845 1.00 35.06 P
ATOM 3 OP1 A B 341 65.034 -0.064 88.033 1.00 34.77 O
ATOM 4 OP2 A B 341 65.776 0.962 90.308 1.00 35.30 O
ATOM 5 O5' A B 341 67.480 0.374 88.583 1.00 35.18 O
ATOM 6 C5' A B 341 67.783 -0.634 87.659 1.00 35.01 C
ATOM 7 C4' A B 341 69.045 -1.320 88.024 1.00 35.21 C
ATOM 8 O4' A B 341 70.061 -0.332 88.308 1.00 35.44 O
ATOM 9 C3' A B 341 68.976 -2.131 89.269 1.00 35.37 C
ATOM 10 O3' A B 341 68.441 -3.404 89.041 1.00 35.22 O
ATOM 11 C2' A B 341 70.423 -2.162 89.724 1.00 35.65 C
ATOM 12 O2' A B 341 71.142 -3.100 88.949 1.00 35.59 O
ATOM 13 C1' A B 341 70.884 -0.768 89.343 1.00 35.71 C
ATOM 14 N9 A B 341 70.762 0.188 90.449 1.00 35.94 N
ATOM 15 C8 A B 341 69.885 1.196 90.528 1.00 35.89 C
ATOM 16 N7 A B 341 70.020 1.887 91.604 1.00 36.15 N
ATOM 17 C5 A B 341 71.118 1.344 92.276 1.00 36.40 C
ATOM 18 C6 A B 341 71.812 1.621 93.500 1.00 36.77 C
ATOM 19 N6 A B 341 71.513 2.570 94.371 1.00 36.96 N
ATOM 20 N1 A B 341 72.857 0.861 93.862 1.00 36.95 N
ATOM 21 C2 A B 341 73.211 -0.122 93.053 1.00 36.79 C
ATOM 22 N3 A B 341 72.674 -0.470 91.894 1.00 36.46 N
ATOM 23 C4 A B 341 71.598 0.293 91.549 1.00 36.27 C
ATOM 24 P G B 342 67.674 -4.106 90.221 1.00 36.29 P
ATOM 25 OP1 G B 342 67.394 -5.539 89.835 1.00 36.15 O
ATOM 26 OP2 G B 342 66.609 -3.256 90.528 1.00 36.23 O
ATOM 27 O5' G B 342 68.728 -3.994 91.416 1.00 36.65 O
TER
Atoms:
OP1: (73.509,-13.787,86.294)
OP2: (71.983,-15.555,85.330)
C3': (71.124,-11.074,82.738)
C1': (70.436,-9.927,84.609)
C5': (70.625,-13.238,83.942)
O6: (70.551,-7.640,90.118)
O4': (69.755,-11.130,84.632)
C8: (71.545,-10.102,86.788)
C2: (68.666,-6.904,87.271)
C6: (70.170,-7.724,88.948)
C5: (70.571,-8.592,87.922)
C4: (69.994,-8.560,86.703)
P: (72.563,-14.203,85.249)
C4': (70.138,-11.907,83.495)
C2': (71.693,-10.206,83.798)
O2': (72.232,-9.032,83.269)
N1: (69.179,-6.887,88.519)
N2: (67.718,-5.973,87.156)
N3: (69.038,-7.734,86.289)
N7: (71.535,-9.560,87.953)
N9: (70.650,-9.524,85.986)
O5': (71.434,-13.154,85.082)
O3': (70.409,-10.246,81.822)
OP2: (71.983,-15.555,85.330)
C3': (71.124,-11.074,82.738)
C1': (70.436,-9.927,84.609)
C5': (70.625,-13.238,83.942)
O6: (70.551,-7.640,90.118)
O4': (69.755,-11.130,84.632)
C8: (71.545,-10.102,86.788)
C2: (68.666,-6.904,87.271)
C6: (70.170,-7.724,88.948)
C5: (70.571,-8.592,87.922)
C4: (69.994,-8.560,86.703)
P: (72.563,-14.203,85.249)
C4': (70.138,-11.907,83.495)
C2': (71.693,-10.206,83.798)
O2': (72.232,-9.032,83.269)
N1: (69.179,-6.887,88.519)
N2: (67.718,-5.973,87.156)
N3: (69.038,-7.734,86.289)
N7: (71.535,-9.560,87.953)
N9: (70.650,-9.524,85.986)
O5': (71.434,-13.154,85.082)
O3': (70.409,-10.246,81.822)
OP1: (65.034,-0.064,88.033)
OP2: (65.776,0.962,90.308)
C3': (68.976,-2.131,89.269)
C1': (70.884,-0.768,89.343)
C5': (67.783,-0.634,87.659)
O4': (70.061,-0.332,88.308)
C8: (69.885,1.196,90.528)
O2': (71.142,-3.100,88.949)
C6: (71.812,1.621,93.500)
C5: (71.118,1.344,92.276)
C4: (71.598,0.293,91.549)
P: (65.994,0.810,88.845)
C4': (69.045,-1.320,88.024)
C2': (70.423,-2.162,89.724)
C2: (73.211,-0.122,93.053)
N1: (72.857,0.861,93.862)
N3: (72.674,-0.470,91.894)
N6: (71.513,2.570,94.371)
N7: (70.020,1.887,91.604)
N9: (70.762,0.188,90.449)
O5': (67.480,0.374,88.583)
O3': (68.441,-3.404,89.041)
OP2: (65.776,0.962,90.308)
C3': (68.976,-2.131,89.269)
C1': (70.884,-0.768,89.343)
C5': (67.783,-0.634,87.659)
O4': (70.061,-0.332,88.308)
C8: (69.885,1.196,90.528)
O2': (71.142,-3.100,88.949)
C6: (71.812,1.621,93.500)
C5: (71.118,1.344,92.276)
C4: (71.598,0.293,91.549)
P: (65.994,0.810,88.845)
C4': (69.045,-1.320,88.024)
C2': (70.423,-2.162,89.724)
C2: (73.211,-0.122,93.053)
N1: (72.857,0.861,93.862)
N3: (72.674,-0.470,91.894)
N6: (71.513,2.570,94.371)
N7: (70.020,1.887,91.604)
N9: (70.762,0.188,90.449)
O5': (67.480,0.374,88.583)
O3': (68.441,-3.404,89.041)
Image (generated by PyMOL):