Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51379:5341
Extra
PDB:
ATOM 1 O3' A A1378 108.891 -15.834 208.638 1.00 43.47 O
ATOM 2 P G A1379 109.923 -16.122 207.457 1.00 44.16 P
ATOM 3 OP1 G A1379 109.216 -15.872 206.172 1.00 44.58 O
ATOM 4 OP2 G A1379 110.511 -17.462 207.710 1.00 44.18 O
ATOM 5 O5' G A1379 111.011 -14.985 207.704 1.00 43.75 O
ATOM 6 C5' G A1379 111.567 -14.814 209.004 1.00 43.31 C
ATOM 7 C4' G A1379 111.858 -13.381 209.336 1.00 42.99 C
ATOM 8 O4' G A1379 112.482 -12.749 208.208 1.00 43.08 O
ATOM 9 C3' G A1379 110.663 -12.534 209.686 1.00 43.01 C
ATOM 10 O3' G A1379 111.066 -11.550 210.628 1.00 42.60 O
ATOM 11 C2' G A1379 110.365 -11.844 208.371 1.00 43.30 C
ATOM 12 O2' G A1379 109.671 -10.636 208.507 1.00 43.25 O
ATOM 13 C1' G A1379 111.756 -11.598 207.866 1.00 43.15 C
ATOM 14 N9 G A1379 111.846 -11.408 206.437 1.00 43.48 N
ATOM 15 C8 G A1379 111.196 -12.125 205.520 1.00 43.91 C
ATOM 16 N7 G A1379 111.478 -11.794 204.302 1.00 44.15 N
ATOM 17 C5 G A1379 112.391 -10.796 204.479 1.00 43.83 C
ATOM 18 C6 G A1379 113.034 -10.068 203.489 1.00 43.91 C
ATOM 19 O6 G A1379 112.970 -10.125 202.271 1.00 44.27 O
ATOM 20 N1 G A1379 113.875 -9.172 204.036 1.00 43.53 N
ATOM 21 C2 G A1379 114.083 -8.979 205.357 1.00 43.12 C
ATOM 22 N2 G A1379 114.989 -8.002 205.500 1.00 42.84 N
ATOM 23 N3 G A1379 113.469 -9.656 206.330 1.00 43.04 N
ATOM 24 C4 G A1379 112.638 -10.543 205.783 1.00 43.42 C
ATOM 25 P U A1380 110.794 -11.753 212.188 1.00 36.91 P
ATOM 26 OP1 U A1380 111.555 -10.851 212.872 1.00 36.52 O
ATOM 27 OP2 U A1380 110.975 -13.187 212.506 1.00 36.98 O
ATOM 28 O5' U A1380 109.297 -11.330 212.327 1.00 37.10 O
TER
ATOM 1 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 2 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A B 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A B 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A B 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A B 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A B 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A B 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A B 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A B 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A B 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A B 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A B 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A B 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A B 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A B 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A B 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A B 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A B 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
TER
ATOM 2 P G A1379 109.923 -16.122 207.457 1.00 44.16 P
ATOM 3 OP1 G A1379 109.216 -15.872 206.172 1.00 44.58 O
ATOM 4 OP2 G A1379 110.511 -17.462 207.710 1.00 44.18 O
ATOM 5 O5' G A1379 111.011 -14.985 207.704 1.00 43.75 O
ATOM 6 C5' G A1379 111.567 -14.814 209.004 1.00 43.31 C
ATOM 7 C4' G A1379 111.858 -13.381 209.336 1.00 42.99 C
ATOM 8 O4' G A1379 112.482 -12.749 208.208 1.00 43.08 O
ATOM 9 C3' G A1379 110.663 -12.534 209.686 1.00 43.01 C
ATOM 10 O3' G A1379 111.066 -11.550 210.628 1.00 42.60 O
ATOM 11 C2' G A1379 110.365 -11.844 208.371 1.00 43.30 C
ATOM 12 O2' G A1379 109.671 -10.636 208.507 1.00 43.25 O
ATOM 13 C1' G A1379 111.756 -11.598 207.866 1.00 43.15 C
ATOM 14 N9 G A1379 111.846 -11.408 206.437 1.00 43.48 N
ATOM 15 C8 G A1379 111.196 -12.125 205.520 1.00 43.91 C
ATOM 16 N7 G A1379 111.478 -11.794 204.302 1.00 44.15 N
ATOM 17 C5 G A1379 112.391 -10.796 204.479 1.00 43.83 C
ATOM 18 C6 G A1379 113.034 -10.068 203.489 1.00 43.91 C
ATOM 19 O6 G A1379 112.970 -10.125 202.271 1.00 44.27 O
ATOM 20 N1 G A1379 113.875 -9.172 204.036 1.00 43.53 N
ATOM 21 C2 G A1379 114.083 -8.979 205.357 1.00 43.12 C
ATOM 22 N2 G A1379 114.989 -8.002 205.500 1.00 42.84 N
ATOM 23 N3 G A1379 113.469 -9.656 206.330 1.00 43.04 N
ATOM 24 C4 G A1379 112.638 -10.543 205.783 1.00 43.42 C
ATOM 25 P U A1380 110.794 -11.753 212.188 1.00 36.91 P
ATOM 26 OP1 U A1380 111.555 -10.851 212.872 1.00 36.52 O
ATOM 27 OP2 U A1380 110.975 -13.187 212.506 1.00 36.98 O
ATOM 28 O5' U A1380 109.297 -11.330 212.327 1.00 37.10 O
TER
ATOM 1 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 2 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A B 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A B 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A B 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A B 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A B 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A B 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A B 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A B 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A B 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A B 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A B 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A B 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A B 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A B 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A B 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A B 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A B 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
TER
Atoms:
OP1: (109.216,-15.872,206.172)
OP2: (110.511,-17.462,207.710)
C3': (110.663,-12.534,209.686)
C1': (111.756,-11.598,207.866)
C5': (111.567,-14.814,209.004)
O6: (112.970,-10.125,202.271)
O4': (112.482,-12.749,208.208)
C8: (111.196,-12.125,205.520)
C2: (114.083,-8.979,205.357)
C6: (113.034,-10.068,203.489)
C5: (112.391,-10.796,204.479)
C4: (112.638,-10.543,205.783)
P: (109.923,-16.122,207.457)
C4': (111.858,-13.381,209.336)
C2': (110.365,-11.844,208.371)
O2': (109.671,-10.636,208.507)
N1: (113.875,-9.172,204.036)
N2: (114.989,-8.002,205.500)
N3: (113.469,-9.656,206.330)
N7: (111.478,-11.794,204.302)
N9: (111.846,-11.408,206.437)
O5': (111.011,-14.985,207.704)
O3': (111.066,-11.550,210.628)
OP2: (110.511,-17.462,207.710)
C3': (110.663,-12.534,209.686)
C1': (111.756,-11.598,207.866)
C5': (111.567,-14.814,209.004)
O6: (112.970,-10.125,202.271)
O4': (112.482,-12.749,208.208)
C8: (111.196,-12.125,205.520)
C2: (114.083,-8.979,205.357)
C6: (113.034,-10.068,203.489)
C5: (112.391,-10.796,204.479)
C4: (112.638,-10.543,205.783)
P: (109.923,-16.122,207.457)
C4': (111.858,-13.381,209.336)
C2': (110.365,-11.844,208.371)
O2': (109.671,-10.636,208.507)
N1: (113.875,-9.172,204.036)
N2: (114.989,-8.002,205.500)
N3: (113.469,-9.656,206.330)
N7: (111.478,-11.794,204.302)
N9: (111.846,-11.408,206.437)
O5': (111.011,-14.985,207.704)
O3': (111.066,-11.550,210.628)
OP1: (117.943,-2.023,204.218)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
Image (generated by PyMOL):