ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0509:013

Extra

PDB:
ATOM 1 O3' A A 508 27.843 133.954 79.363 1.00 31.05 O
ATOM 2 P A A 509 27.894 134.951 80.621 1.00 31.02 P
ATOM 3 OP1 A A 509 27.456 134.173 81.796 1.00 30.10 O
ATOM 4 OP2 A A 509 27.180 136.211 80.272 1.00 32.79 O
ATOM 5 O5' A A 509 29.444 135.278 80.774 1.00 29.54 O
ATOM 6 C5' A A 509 30.385 134.227 81.085 1.00 32.66 C
ATOM 7 C4' A A 509 31.806 134.728 80.968 1.00 32.04 C
ATOM 8 O4' A A 509 32.076 135.152 79.605 1.00 34.73 O
ATOM 9 C3' A A 509 32.151 135.959 81.788 1.00 32.62 C
ATOM 10 O3' A A 509 32.416 135.606 83.141 1.00 32.54 O
ATOM 11 C2' A A 509 33.412 136.454 81.092 1.00 31.38 C
ATOM 12 O2' A A 509 34.572 135.743 81.465 1.00 32.86 O
ATOM 13 C1' A A 509 33.101 136.134 79.625 1.00 33.56 C
ATOM 14 N9 A A 509 32.662 137.316 78.886 1.00 31.82 N
ATOM 15 C8 A A 509 31.452 137.962 78.914 1.00 31.99 C
ATOM 16 N7 A A 509 31.417 139.049 78.175 1.00 29.84 N
ATOM 17 C5 A A 509 32.684 139.110 77.619 1.00 30.66 C
ATOM 18 C6 A A 509 33.280 140.015 76.747 1.00 29.67 C
ATOM 19 N6 A A 509 32.670 141.113 76.290 1.00 30.76 N
ATOM 20 N1 A A 509 34.545 139.764 76.351 1.00 29.10 N
ATOM 21 C2 A A 509 35.161 138.683 76.819 1.00 30.54 C
ATOM 22 N3 A A 509 34.715 137.764 77.662 1.00 32.53 N
ATOM 23 C4 A A 509 33.451 138.037 78.028 1.00 32.07 C
ATOM 24 P U A 510 31.591 136.302 84.332 1.00 33.84 P
ATOM 25 OP1 U A 510 32.269 135.873 85.573 1.00 35.36 O
ATOM 26 OP2 U A 510 30.133 136.055 84.162 1.00 35.69 O
ATOM 27 O5' U A 510 31.837 137.862 84.138 1.00 34.97 O
TER

ATOM 1 O3' U B 12 34.076 147.478 73.857 1.00 36.64 O
ATOM 2 P G B 13 34.516 147.094 72.363 1.00 35.59 P
ATOM 3 OP1 G B 13 35.918 147.546 72.199 1.00 37.73 O
ATOM 4 OP2 G B 13 33.472 147.576 71.419 1.00 36.60 O
ATOM 5 O5' G B 13 34.491 145.501 72.337 1.00 37.56 O
ATOM 6 C5' G B 13 35.466 144.713 73.052 1.00 33.53 C
ATOM 7 C4' G B 13 35.063 143.256 73.022 1.00 32.75 C
ATOM 8 O4' G B 13 33.778 143.113 73.685 1.00 34.82 O
ATOM 9 C3' G B 13 34.827 142.701 71.628 1.00 32.20 C
ATOM 10 O3' G B 13 36.049 142.248 71.066 1.00 31.86 O
ATOM 11 C2' G B 13 33.845 141.567 71.886 1.00 32.35 C
ATOM 12 O2' G B 13 34.479 140.429 72.422 1.00 31.12 O
ATOM 13 C1' G B 13 32.979 142.170 72.992 1.00 33.17 C
ATOM 14 N9 G B 13 31.776 142.853 72.531 1.00 33.98 N
ATOM 15 C8 G B 13 31.686 144.131 72.026 1.00 33.37 C
ATOM 16 N7 G B 13 30.463 144.486 71.740 1.00 32.18 N
ATOM 17 C5 G B 13 29.696 143.372 72.064 1.00 33.06 C
ATOM 18 C6 G B 13 28.294 143.164 71.969 1.00 32.20 C
ATOM 19 O6 G B 13 27.424 143.958 71.585 1.00 30.88 O
ATOM 20 N1 G B 13 27.935 141.882 72.391 1.00 31.21 N
ATOM 21 C2 G B 13 28.812 140.931 72.861 1.00 33.50 C
ATOM 22 N2 G B 13 28.281 139.757 73.231 1.00 34.11 N
ATOM 23 N3 G B 13 30.122 141.117 72.962 1.00 33.37 N
ATOM 24 C4 G B 13 30.491 142.352 72.545 1.00 34.16 C
ATOM 25 P G B 14 36.382 142.541 69.518 1.00 32.25 P
ATOM 26 OP1 G B 14 37.850 142.386 69.340 1.00 32.31 O
ATOM 27 OP2 G B 14 35.716 143.819 69.142 1.00 28.90 O
ATOM 28 O5' G B 14 35.689 141.332 68.754 1.00 31.32 O
TER

Atoms:
OP1: (27.456,134.173,81.796)
OP2: (27.180,136.211,80.272)
C3': (32.151,135.959,81.788)
C1': (33.101,136.134,79.625)
C5': (30.385,134.227,81.085)
O4': (32.076,135.152,79.605)
C8: (31.452,137.962,78.914)
O2': (34.572,135.743,81.465)
C6: (33.280,140.015,76.747)
C5: (32.684,139.110,77.619)
C4: (33.451,138.037,78.028)
P: (27.894,134.951,80.621)
C4': (31.806,134.728,80.968)
C2': (33.412,136.454,81.092)
C2: (35.161,138.683,76.819)
N1: (34.545,139.764,76.351)
N3: (34.715,137.764,77.662)
N6: (32.670,141.113,76.290)
N7: (31.417,139.049,78.175)
N9: (32.662,137.316,78.886)
O5': (29.444,135.278,80.774)
O3': (32.416,135.606,83.141)
OP1: (35.918,147.546,72.199)
OP2: (33.472,147.576,71.419)
C3': (34.827,142.701,71.628)
C1': (32.979,142.170,72.992)
C5': (35.466,144.713,73.052)
O6: (27.424,143.958,71.585)
O4': (33.778,143.113,73.685)
C8: (31.686,144.131,72.026)
C2: (28.812,140.931,72.861)
C6: (28.294,143.164,71.969)
C5: (29.696,143.372,72.064)
C4: (30.491,142.352,72.545)
P: (34.516,147.094,72.363)
C4': (35.063,143.256,73.022)
C2': (33.845,141.567,71.886)
O2': (34.479,140.429,72.422)
N1: (27.935,141.882,72.391)
N2: (28.281,139.757,73.231)
N3: (30.122,141.117,72.962)
N7: (30.463,144.486,71.740)
N9: (31.776,142.853,72.531)
O5': (34.491,145.501,72.337)
O3': (36.049,142.248,71.066)
Image (generated by PyMOL):
PyMOL image
show in jmol