ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01941:01972

Extra

PDB:
ATOM 1 O3' A A1940 92.522 129.607 128.934 1.00 45.19 O
ATOM 2 P G A1941 93.692 129.449 127.853 1.00 49.18 P
ATOM 3 OP1 G A1941 93.729 128.015 127.462 1.00 48.01 O
ATOM 4 OP2 G A1941 94.922 130.097 128.379 1.00 49.83 O
ATOM 5 O5' G A1941 93.176 130.310 126.617 1.00 48.47 O
ATOM 6 C5' G A1941 91.959 129.962 125.948 1.00 45.39 C
ATOM 7 C4' G A1941 92.162 129.969 124.457 1.00 43.07 C
ATOM 8 O4' G A1941 92.133 131.336 123.978 1.00 43.54 O
ATOM 9 C3' G A1941 93.460 129.363 123.936 1.00 41.42 C
ATOM 10 O3' G A1941 93.194 128.701 122.716 1.00 40.69 O
ATOM 11 C2' G A1941 94.306 130.599 123.657 1.00 41.83 C
ATOM 12 O2' G A1941 95.258 130.414 122.644 1.00 41.33 O
ATOM 13 C1' G A1941 93.251 131.570 123.155 1.00 43.71 C
ATOM 14 N9 G A1941 93.623 132.975 123.266 1.00 46.23 N
ATOM 15 C8 G A1941 94.009 133.638 124.403 1.00 47.58 C
ATOM 16 N7 G A1941 94.292 134.893 124.192 1.00 49.83 N
ATOM 17 C5 G A1941 94.083 135.071 122.831 1.00 48.82 C
ATOM 18 C6 G A1941 94.245 136.227 122.020 1.00 49.29 C
ATOM 19 O6 G A1941 94.647 137.347 122.345 1.00 50.47 O
ATOM 20 N1 G A1941 93.900 135.978 120.700 1.00 49.46 N
ATOM 21 C2 G A1941 93.475 134.773 120.213 1.00 50.16 C
ATOM 22 N2 G A1941 93.188 134.746 118.902 1.00 50.54 N
ATOM 23 N3 G A1941 93.340 133.678 120.952 1.00 48.88 N
ATOM 24 C4 G A1941 93.658 133.901 122.245 1.00 47.87 C
ATOM 25 P U A1942 93.972 127.346 122.360 1.00 41.63 P
ATOM 26 OP1 U A1942 93.644 126.363 123.413 1.00 41.20 O
ATOM 27 OP2 U A1942 95.391 127.647 122.058 1.00 40.23 O
ATOM 28 O5' U A1942 93.302 126.873 120.995 1.00 42.71 O
TER

ATOM 1 O3' G B1971 92.816 134.858 111.400 1.00 40.28 O
ATOM 2 P C B1972 92.424 136.145 112.270 1.00 42.93 P
ATOM 3 OP1 C B1972 91.280 135.776 113.127 1.00 42.63 O
ATOM 4 OP2 C B1972 92.302 137.309 111.354 1.00 42.66 O
ATOM 5 O5' C B1972 93.684 136.370 113.215 1.00 43.51 O
ATOM 6 C5' C B1972 94.083 135.363 114.165 1.00 45.01 C
ATOM 7 C4' C B1972 95.361 135.769 114.870 1.00 45.66 C
ATOM 8 O4' C B1972 96.449 135.871 113.915 1.00 47.21 O
ATOM 9 C3' C B1972 95.367 137.125 115.551 1.00 45.28 C
ATOM 10 O3' C B1972 94.726 137.066 116.812 1.00 44.71 O
ATOM 11 C2' C B1972 96.857 137.398 115.689 1.00 46.98 C
ATOM 12 O2' C B1972 97.460 136.688 116.749 1.00 48.89 O
ATOM 13 C1' C B1972 97.383 136.833 114.371 1.00 47.86 C
ATOM 14 N1 C B1972 97.537 137.893 113.365 1.00 49.64 N
ATOM 15 C2 C B1972 98.711 138.639 113.382 1.00 51.18 C
ATOM 16 O2 C B1972 99.599 138.337 114.193 1.00 53.24 O
ATOM 17 N3 C B1972 98.857 139.665 112.520 1.00 51.89 N
ATOM 18 C4 C B1972 97.888 139.950 111.656 1.00 51.55 C
ATOM 19 N4 C B1972 98.068 140.994 110.851 1.00 52.49 N
ATOM 20 C5 C B1972 96.690 139.180 111.586 1.00 50.80 C
ATOM 21 C6 C B1972 96.558 138.169 112.451 1.00 50.33 C
ATOM 22 P U B1973 94.226 138.416 117.521 1.00 45.47 P
ATOM 23 OP1 U B1973 93.398 137.988 118.675 1.00 46.34 O
ATOM 24 OP2 U B1973 93.655 139.336 116.512 1.00 44.76 O
ATOM 25 O5' U B1973 95.567 139.079 118.061 1.00 47.75 O
TER

Atoms:
OP1: (93.729,128.015,127.462)
OP2: (94.922,130.097,128.379)
C3': (93.460,129.363,123.936)
C1': (93.251,131.570,123.155)
C5': (91.959,129.962,125.948)
O6: (94.647,137.347,122.345)
O4': (92.133,131.336,123.978)
C8: (94.009,133.638,124.403)
C2: (93.475,134.773,120.213)
C6: (94.245,136.227,122.020)
C5: (94.083,135.071,122.831)
C4: (93.658,133.901,122.245)
P: (93.692,129.449,127.853)
C4': (92.162,129.969,124.457)
C2': (94.306,130.599,123.657)
O2': (95.258,130.414,122.644)
N1: (93.900,135.978,120.700)
N2: (93.188,134.746,118.902)
N3: (93.340,133.678,120.952)
N7: (94.292,134.893,124.192)
N9: (93.623,132.975,123.266)
O5': (93.176,130.310,126.617)
O3': (93.194,128.701,122.716)
C2: (98.711,138.639,113.382)
OP1: (91.280,135.776,113.127)
OP2: (92.302,137.309,111.354)
C4: (97.888,139.950,111.656)
O5': (93.684,136.370,113.215)
C3': (95.367,137.125,115.551)
C1': (97.383,136.833,114.371)
O4': (96.449,135.871,113.915)
C5': (94.083,135.363,114.165)
P: (92.424,136.145,112.270)
O2: (99.599,138.337,114.193)
C4': (95.361,135.769,114.870)
C2': (96.857,137.398,115.689)
O2': (97.460,136.688,116.749)
N1: (97.537,137.893,113.365)
N3: (98.857,139.665,112.520)
N4: (98.068,140.994,110.851)
C6: (96.558,138.169,112.451)
C5: (96.690,139.180,111.586)
O3': (94.726,137.066,116.812)
Image (generated by PyMOL):
PyMOL image
show in jmol