Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A384:A356
Extra
PDB:
ATOM 1 O3' A A 383 -26.293 27.051 102.807 1.00 14.11 O
ATOM 2 P G A 384 -27.291 28.243 102.442 1.00 42.38 P
ATOM 3 OP1 G A 384 -28.612 27.672 102.073 1.00 39.99 O
ATOM 4 OP2 G A 384 -26.571 29.136 101.491 1.00 39.99 O
ATOM 5 O5' G A 384 -27.497 29.000 103.820 1.00 31.92 O
ATOM 6 C5' G A 384 -28.130 28.340 104.912 1.00 31.70 C
ATOM 7 C4' G A 384 -28.285 29.285 106.073 1.00 31.62 C
ATOM 8 O4' G A 384 -26.984 29.664 106.589 1.00 32.56 O
ATOM 9 C3' G A 384 -28.962 30.607 105.766 1.00 31.48 C
ATOM 10 O3' G A 384 -30.372 30.479 105.767 1.00 32.64 O
ATOM 11 C2' G A 384 -28.464 31.505 106.892 1.00 31.40 C
ATOM 12 O2' G A 384 -29.178 31.296 108.090 1.00 29.59 O
ATOM 13 C1' G A 384 -27.045 30.985 107.097 1.00 31.78 C
ATOM 14 N9 G A 384 -26.024 31.809 106.455 1.00 38.73 N
ATOM 15 C8 G A 384 -25.201 31.488 105.403 1.00 38.13 C
ATOM 16 N7 G A 384 -24.362 32.440 105.099 1.00 38.92 N
ATOM 17 C5 G A 384 -24.665 33.453 105.990 1.00 39.08 C
ATOM 18 C6 G A 384 -24.100 34.735 106.140 1.00 40.29 C
ATOM 19 O6 G A 384 -23.183 35.253 105.498 1.00 43.33 O
ATOM 20 N1 G A 384 -24.713 35.442 107.169 1.00 41.10 N
ATOM 21 C2 G A 384 -25.741 34.966 107.960 1.00 41.06 C
ATOM 22 N2 G A 384 -26.199 35.786 108.928 1.00 40.92 N
ATOM 23 N3 G A 384 -26.278 33.772 107.820 1.00 39.95 N
ATOM 24 C4 G A 384 -25.695 33.076 106.827 1.00 38.79 C
ATOM 25 P C A 385 -31.245 31.434 104.824 1.00110.09 P
ATOM 26 OP1 C A 385 -32.662 30.993 104.930 1.00 39.02 O
ATOM 27 OP2 C A 385 -30.594 31.501 103.499 1.00 36.75 O
ATOM 28 O5' C A 385 -31.077 32.872 105.480 1.00 41.66 O
TER
ATOM 1 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 2 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 3 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 4 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 5 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
ATOM 6 C5' C B 356 -28.155 42.308 110.429 1.00 32.28 C
ATOM 7 C4' C B 356 -27.956 40.870 109.975 1.00 33.04 C
ATOM 8 O4' C B 356 -27.205 40.823 108.734 1.00 33.05 O
ATOM 9 C3' C B 356 -27.255 39.922 110.937 1.00 34.13 C
ATOM 10 O3' C B 356 -28.048 39.068 111.784 1.00 36.57 O
ATOM 11 C2' C B 356 -25.917 39.558 110.292 1.00 33.39 C
ATOM 12 O2' C B 356 -25.580 38.200 110.461 1.00 33.73 O
ATOM 13 C1' C B 356 -26.180 39.849 108.814 1.00 33.27 C
ATOM 14 N1 C B 356 -25.014 40.385 108.090 1.00 35.98 N
ATOM 15 C2 C B 356 -24.086 39.506 107.520 1.00 35.35 C
ATOM 16 O2 C B 356 -24.242 38.287 107.656 1.00 35.72 O
ATOM 17 N3 C B 356 -23.038 40.009 106.832 1.00 34.69 N
ATOM 18 C4 C B 356 -22.895 41.329 106.705 1.00 33.90 C
ATOM 19 N4 C B 356 -21.851 41.786 106.016 1.00 32.66 N
ATOM 20 C5 C B 356 -23.815 42.240 107.280 1.00 34.50 C
ATOM 21 C6 C B 356 -24.847 41.732 107.960 1.00 35.62 C
ATOM 22 P U B 357 -29.074 37.994 111.152 1.00 71.86 P
ATOM 23 OP1 U B 357 -29.170 38.224 109.689 1.00 69.85 O
ATOM 24 OP2 U B 357 -30.310 38.032 111.981 1.00 70.51 O
ATOM 25 O5' U B 357 -28.370 36.584 111.402 1.00 11.32 O
TER
ATOM 2 P G A 384 -27.291 28.243 102.442 1.00 42.38 P
ATOM 3 OP1 G A 384 -28.612 27.672 102.073 1.00 39.99 O
ATOM 4 OP2 G A 384 -26.571 29.136 101.491 1.00 39.99 O
ATOM 5 O5' G A 384 -27.497 29.000 103.820 1.00 31.92 O
ATOM 6 C5' G A 384 -28.130 28.340 104.912 1.00 31.70 C
ATOM 7 C4' G A 384 -28.285 29.285 106.073 1.00 31.62 C
ATOM 8 O4' G A 384 -26.984 29.664 106.589 1.00 32.56 O
ATOM 9 C3' G A 384 -28.962 30.607 105.766 1.00 31.48 C
ATOM 10 O3' G A 384 -30.372 30.479 105.767 1.00 32.64 O
ATOM 11 C2' G A 384 -28.464 31.505 106.892 1.00 31.40 C
ATOM 12 O2' G A 384 -29.178 31.296 108.090 1.00 29.59 O
ATOM 13 C1' G A 384 -27.045 30.985 107.097 1.00 31.78 C
ATOM 14 N9 G A 384 -26.024 31.809 106.455 1.00 38.73 N
ATOM 15 C8 G A 384 -25.201 31.488 105.403 1.00 38.13 C
ATOM 16 N7 G A 384 -24.362 32.440 105.099 1.00 38.92 N
ATOM 17 C5 G A 384 -24.665 33.453 105.990 1.00 39.08 C
ATOM 18 C6 G A 384 -24.100 34.735 106.140 1.00 40.29 C
ATOM 19 O6 G A 384 -23.183 35.253 105.498 1.00 43.33 O
ATOM 20 N1 G A 384 -24.713 35.442 107.169 1.00 41.10 N
ATOM 21 C2 G A 384 -25.741 34.966 107.960 1.00 41.06 C
ATOM 22 N2 G A 384 -26.199 35.786 108.928 1.00 40.92 N
ATOM 23 N3 G A 384 -26.278 33.772 107.820 1.00 39.95 N
ATOM 24 C4 G A 384 -25.695 33.076 106.827 1.00 38.79 C
ATOM 25 P C A 385 -31.245 31.434 104.824 1.00110.09 P
ATOM 26 OP1 C A 385 -32.662 30.993 104.930 1.00 39.02 O
ATOM 27 OP2 C A 385 -30.594 31.501 103.499 1.00 36.75 O
ATOM 28 O5' C A 385 -31.077 32.872 105.480 1.00 41.66 O
TER
ATOM 1 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 2 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 3 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 4 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 5 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
ATOM 6 C5' C B 356 -28.155 42.308 110.429 1.00 32.28 C
ATOM 7 C4' C B 356 -27.956 40.870 109.975 1.00 33.04 C
ATOM 8 O4' C B 356 -27.205 40.823 108.734 1.00 33.05 O
ATOM 9 C3' C B 356 -27.255 39.922 110.937 1.00 34.13 C
ATOM 10 O3' C B 356 -28.048 39.068 111.784 1.00 36.57 O
ATOM 11 C2' C B 356 -25.917 39.558 110.292 1.00 33.39 C
ATOM 12 O2' C B 356 -25.580 38.200 110.461 1.00 33.73 O
ATOM 13 C1' C B 356 -26.180 39.849 108.814 1.00 33.27 C
ATOM 14 N1 C B 356 -25.014 40.385 108.090 1.00 35.98 N
ATOM 15 C2 C B 356 -24.086 39.506 107.520 1.00 35.35 C
ATOM 16 O2 C B 356 -24.242 38.287 107.656 1.00 35.72 O
ATOM 17 N3 C B 356 -23.038 40.009 106.832 1.00 34.69 N
ATOM 18 C4 C B 356 -22.895 41.329 106.705 1.00 33.90 C
ATOM 19 N4 C B 356 -21.851 41.786 106.016 1.00 32.66 N
ATOM 20 C5 C B 356 -23.815 42.240 107.280 1.00 34.50 C
ATOM 21 C6 C B 356 -24.847 41.732 107.960 1.00 35.62 C
ATOM 22 P U B 357 -29.074 37.994 111.152 1.00 71.86 P
ATOM 23 OP1 U B 357 -29.170 38.224 109.689 1.00 69.85 O
ATOM 24 OP2 U B 357 -30.310 38.032 111.981 1.00 70.51 O
ATOM 25 O5' U B 357 -28.370 36.584 111.402 1.00 11.32 O
TER
Atoms:
OP1: (-28.612,27.672,102.073)
OP2: (-26.571,29.136,101.491)
C3': (-28.962,30.607,105.766)
C1': (-27.045,30.985,107.097)
C5': (-28.130,28.340,104.912)
O6: (-23.183,35.253,105.498)
O4': (-26.984,29.664,106.589)
C8: (-25.201,31.488,105.403)
C2: (-25.741,34.966,107.960)
C6: (-24.100,34.735,106.140)
C5: (-24.665,33.453,105.990)
C4: (-25.695,33.076,106.827)
P: (-27.291,28.243,102.442)
C4': (-28.285,29.285,106.073)
C2': (-28.464,31.505,106.892)
O2': (-29.178,31.296,108.090)
N1: (-24.713,35.442,107.169)
N2: (-26.199,35.786,108.928)
N3: (-26.278,33.772,107.820)
N7: (-24.362,32.440,105.099)
N9: (-26.024,31.809,106.455)
O5': (-27.497,29.000,103.820)
O3': (-30.372,30.479,105.767)
OP2: (-26.571,29.136,101.491)
C3': (-28.962,30.607,105.766)
C1': (-27.045,30.985,107.097)
C5': (-28.130,28.340,104.912)
O6: (-23.183,35.253,105.498)
O4': (-26.984,29.664,106.589)
C8: (-25.201,31.488,105.403)
C2: (-25.741,34.966,107.960)
C6: (-24.100,34.735,106.140)
C5: (-24.665,33.453,105.990)
C4: (-25.695,33.076,106.827)
P: (-27.291,28.243,102.442)
C4': (-28.285,29.285,106.073)
C2': (-28.464,31.505,106.892)
O2': (-29.178,31.296,108.090)
N1: (-24.713,35.442,107.169)
N2: (-26.199,35.786,108.928)
N3: (-26.278,33.772,107.820)
N7: (-24.362,32.440,105.099)
N9: (-26.024,31.809,106.455)
O5': (-27.497,29.000,103.820)
O3': (-30.372,30.479,105.767)
C2: (-24.086,39.506,107.520)
OP1: (-28.074,45.066,111.188)
OP2: (-25.596,44.763,111.876)
C4: (-22.895,41.329,106.705)
O5': (-26.904,42.893,110.851)
C3': (-27.255,39.922,110.937)
C1': (-26.180,39.849,108.814)
O4': (-27.205,40.823,108.734)
C5': (-28.155,42.308,110.429)
P: (-26.729,44.472,110.941)
O2: (-24.242,38.287,107.656)
C4': (-27.956,40.870,109.975)
C2': (-25.917,39.558,110.292)
O2': (-25.580,38.200,110.461)
N1: (-25.014,40.385,108.090)
N3: (-23.038,40.009,106.832)
N4: (-21.851,41.786,106.016)
C6: (-24.847,41.732,107.960)
C5: (-23.815,42.240,107.280)
O3': (-28.048,39.068,111.784)
OP1: (-28.074,45.066,111.188)
OP2: (-25.596,44.763,111.876)
C4: (-22.895,41.329,106.705)
O5': (-26.904,42.893,110.851)
C3': (-27.255,39.922,110.937)
C1': (-26.180,39.849,108.814)
O4': (-27.205,40.823,108.734)
C5': (-28.155,42.308,110.429)
P: (-26.729,44.472,110.941)
O2: (-24.242,38.287,107.656)
C4': (-27.956,40.870,109.975)
C2': (-25.917,39.558,110.292)
O2': (-25.580,38.200,110.461)
N1: (-25.014,40.385,108.090)
N3: (-23.038,40.009,106.832)
N4: (-21.851,41.786,106.016)
C6: (-24.847,41.732,107.960)
C5: (-23.815,42.240,107.280)
O3': (-28.048,39.068,111.784)
Image (generated by PyMOL):