ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A384:A356

Extra

PDB:
ATOM 1 O3' A A 383 136.376 71.535 29.518 1.00 47.19 O
ATOM 2 P G A 384 137.769 72.248 29.158 1.00 47.80 P
ATOM 3 OP1 G A 384 138.415 72.660 30.443 1.00 47.38 O
ATOM 4 OP2 G A 384 137.496 73.261 28.110 1.00 47.25 O
ATOM 5 O5' G A 384 138.631 71.082 28.540 1.00 46.54 O
ATOM 6 C5' G A 384 138.944 69.928 29.319 1.00 46.42 C
ATOM 7 C4' G A 384 139.932 69.060 28.596 1.00 46.27 C
ATOM 8 O4' G A 384 139.309 68.434 27.448 1.00 47.61 O
ATOM 9 C3' G A 384 141.132 69.779 28.018 1.00 46.39 C
ATOM 10 O3' G A 384 142.101 70.017 28.993 1.00 47.85 O
ATOM 11 C2' G A 384 141.608 68.818 26.935 1.00 46.50 C
ATOM 12 O2' G A 384 142.424 67.777 27.419 1.00 45.14 O
ATOM 13 C1' G A 384 140.287 68.228 26.438 1.00 46.81 C
ATOM 14 N9 G A 384 139.846 68.860 25.198 1.00 46.20 N
ATOM 15 C8 G A 384 138.856 69.794 25.033 1.00 45.52 C
ATOM 16 N7 G A 384 138.727 70.186 23.795 1.00 46.20 N
ATOM 17 C5 G A 384 139.685 69.460 23.104 1.00 46.86 C
ATOM 18 C6 G A 384 140.025 69.459 21.724 1.00 48.17 C
ATOM 19 O6 G A 384 139.529 70.122 20.799 1.00 51.23 O
ATOM 20 N1 G A 384 141.057 68.572 21.457 1.00 48.66 N
ATOM 21 C2 G A 384 141.688 67.789 22.390 1.00 48.75 C
ATOM 22 N2 G A 384 142.674 66.999 21.935 1.00 48.66 N
ATOM 23 N3 G A 384 141.379 67.780 23.673 1.00 48.01 N
ATOM 24 C4 G A 384 140.377 68.634 23.956 1.00 46.49 C
ATOM 25 P C A 385 143.085 71.275 28.836 1.00 48.96 P
ATOM 26 OP1 C A 385 143.982 71.286 30.041 1.00 49.67 O
ATOM 27 OP2 C A 385 142.272 72.472 28.516 1.00 47.70 O
ATOM 28 O5' C A 385 143.964 70.875 27.585 1.00 47.78 O
TER

ATOM 1 O3' U B 355 148.204 68.414 15.176 1.00 43.99 O
ATOM 2 P C B 356 148.217 66.824 15.392 1.00 43.78 P
ATOM 3 OP1 C B 356 149.653 66.418 15.506 1.00 43.40 O
ATOM 4 OP2 C B 356 147.338 66.207 14.348 1.00 43.29 O
ATOM 5 O5' C B 356 147.552 66.674 16.817 1.00 41.73 O
ATOM 6 C5' C B 356 148.164 67.280 17.963 1.00 42.67 C
ATOM 7 C4' C B 356 147.173 67.382 19.092 1.00 43.80 C
ATOM 8 O4' C B 356 146.233 68.456 18.844 1.00 43.58 O
ATOM 9 C3' C B 356 146.357 66.131 19.358 1.00 44.94 C
ATOM 10 O3' C B 356 146.710 65.366 20.543 1.00 47.78 O
ATOM 11 C2' C B 356 144.929 66.460 18.919 1.00 43.76 C
ATOM 12 O2' C B 356 143.947 65.904 19.768 1.00 43.92 O
ATOM 13 C1' C B 356 144.896 67.992 18.965 1.00 43.24 C
ATOM 14 N1 C B 356 144.115 68.601 17.851 1.00 41.72 N
ATOM 15 C2 C B 356 142.756 68.972 18.043 1.00 40.60 C
ATOM 16 O2 C B 356 142.210 68.758 19.129 1.00 41.53 O
ATOM 17 N3 C B 356 142.082 69.555 17.023 1.00 39.07 N
ATOM 18 C4 C B 356 142.694 69.767 15.853 1.00 38.43 C
ATOM 19 N4 C B 356 142.006 70.367 14.884 1.00 36.18 N
ATOM 20 C5 C B 356 144.047 69.383 15.626 1.00 39.12 C
ATOM 21 C6 C B 356 144.712 68.812 16.638 1.00 40.92 C
ATOM 22 P U B 357 146.428 65.944 22.020 1.00 49.08 P
ATOM 23 OP1 U B 357 146.117 67.406 21.904 1.00 50.56 O
ATOM 24 OP2 U B 357 147.572 65.508 22.839 1.00 51.08 O
ATOM 25 O5' U B 357 145.135 65.175 22.523 1.00 46.54 O
TER

Atoms:
OP1: (138.415,72.660,30.443)
OP2: (137.496,73.261,28.110)
C3': (141.132,69.779,28.018)
C1': (140.287,68.228,26.438)
C5': (138.944,69.928,29.319)
O6: (139.529,70.122,20.799)
O4': (139.309,68.434,27.448)
C8: (138.856,69.794,25.033)
C2: (141.688,67.789,22.390)
C6: (140.025,69.459,21.724)
C5: (139.685,69.460,23.104)
C4: (140.377,68.634,23.956)
P: (137.769,72.248,29.158)
C4': (139.932,69.060,28.596)
C2': (141.608,68.818,26.935)
O2': (142.424,67.777,27.419)
N1: (141.057,68.572,21.457)
N2: (142.674,66.999,21.935)
N3: (141.379,67.780,23.673)
N7: (138.727,70.186,23.795)
N9: (139.846,68.860,25.198)
O5': (138.631,71.082,28.540)
O3': (142.101,70.017,28.993)
C2: (142.756,68.972,18.043)
OP1: (149.653,66.418,15.506)
OP2: (147.338,66.207,14.348)
C4: (142.694,69.767,15.853)
O5': (147.552,66.674,16.817)
C3': (146.357,66.131,19.358)
C1': (144.896,67.992,18.965)
O4': (146.233,68.456,18.844)
C5': (148.164,67.280,17.963)
P: (148.217,66.824,15.392)
O2: (142.210,68.758,19.129)
C4': (147.173,67.382,19.092)
C2': (144.929,66.460,18.919)
O2': (143.947,65.904,19.768)
N1: (144.115,68.601,17.851)
N3: (142.082,69.555,17.023)
N4: (142.006,70.367,14.884)
C6: (144.712,68.812,16.638)
C5: (144.047,69.383,15.626)
O3': (146.710,65.366,20.543)
Image (generated by PyMOL):
PyMOL image
show in jmol