Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A476:A499
Extra
PDB:
ATOM 1 O3' G A 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 2 P A A 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A A 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A A 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A A 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A A 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A A 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A A 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A A 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A A 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A A 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A A 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A A 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A A 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A A 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A A 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A A 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A A 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A A 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A A 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A A 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A A 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A A 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A A 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A A 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A A 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A A 477 -7.272 161.023 214.392 1.00 6.52 O
TER
ATOM 1 O3' U B 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 2 P G B 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G B 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G B 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G B 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G B 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G B 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G B 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G B 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G B 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G B 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G B 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G B 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G B 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G B 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G B 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G B 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G B 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G B 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G B 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G B 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G B 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G B 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G B 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A B 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A B 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A B 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A B 500 -11.203 156.376 225.727 1.00 0.40 O
TER
ATOM 2 P A A 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A A 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A A 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A A 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A A 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A A 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A A 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A A 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A A 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A A 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A A 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A A 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A A 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A A 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A A 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A A 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A A 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A A 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A A 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A A 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A A 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A A 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A A 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A A 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A A 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A A 477 -7.272 161.023 214.392 1.00 6.52 O
TER
ATOM 1 O3' U B 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 2 P G B 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G B 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G B 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G B 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G B 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G B 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G B 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G B 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G B 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G B 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G B 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G B 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G B 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G B 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G B 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G B 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G B 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G B 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G B 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G B 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G B 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G B 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G B 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A B 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A B 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A B 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A B 500 -11.203 156.376 225.727 1.00 0.40 O
TER
Atoms:
OP1: (-14.084,160.048,216.875)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
OP1: (-4.616,155.112,226.298)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
Image (generated by PyMOL):