Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M132:M4
Extra
PDB:
ATOM 1 O3' G A 131 -35.695 12.496-127.784 1.00244.24 O
ATOM 2 P G A 132 -36.247 12.414-129.295 1.00241.13 P
ATOM 3 OP1 G A 132 -37.238 11.318-129.326 1.00248.29 O
ATOM 4 OP2 G A 132 -35.088 12.348-130.213 1.00237.20 O
ATOM 5 O5' G A 132 -36.980 13.823-129.532 1.00235.57 O
ATOM 6 C5' G A 132 -38.396 13.943-129.501 1.00238.36 C
ATOM 7 C4' G A 132 -38.933 13.743-128.089 1.00245.07 C
ATOM 8 O4' G A 132 -38.207 14.559-127.134 1.00242.70 O
ATOM 9 C3' G A 132 -40.402 14.109-127.942 1.00247.28 C
ATOM 10 O3' G A 132 -41.271 12.945-127.780 1.00256.41 O
ATOM 11 C2' G A 132 -40.455 15.105-126.772 1.00246.14 C
ATOM 12 O2' G A 132 -40.867 14.529-125.549 1.00253.95 O
ATOM 13 C1' G A 132 -39.017 15.608-126.651 1.00241.23 C
ATOM 14 N9 G A 132 -38.690 16.836-127.398 1.00233.22 N
ATOM 15 C8 G A 132 -37.770 16.981-128.416 1.00228.00 C
ATOM 16 N7 G A 132 -37.687 18.192-128.895 1.00222.01 N
ATOM 17 C5 G A 132 -38.611 18.914-128.149 1.00222.72 C
ATOM 18 C6 G A 132 -38.963 20.290-128.209 1.00217.96 C
ATOM 19 O6 G A 132 -38.518 21.173-128.958 1.00212.46 O
ATOM 20 N1 G A 132 -39.943 20.604-127.268 1.00221.30 N
ATOM 21 C2 G A 132 -40.512 19.712-126.379 1.00228.35 C
ATOM 22 N2 G A 132 -41.445 20.186-125.541 1.00231.01 N
ATOM 23 N3 G A 132 -40.184 18.429-126.312 1.00232.83 N
ATOM 24 C4 G A 132 -39.233 18.094-127.222 1.00229.68 C
ATOM 25 P G A 133 -41.337 11.659-128.764 1.00260.49 P
ATOM 26 OP1 G A 133 -42.319 10.711-128.180 1.00270.31 O
ATOM 27 OP2 G A 133 -39.963 11.151-128.934 1.00259.11 O
ATOM 28 O5' G A 133 -41.897 12.115-130.205 1.00254.36 O
TER
ATOM 1 O3' U B 3 -44.448 25.121-125.501 1.00197.80 O
ATOM 2 P C B 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 3 OP1 C B 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 4 OP2 C B 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 5 O5' C B 4 -43.520 25.653-123.203 1.00204.68 O
ATOM 6 C5' C B 4 -43.699 24.257-122.906 1.00211.25 C
ATOM 7 C4' C B 4 -42.386 23.483-122.831 1.00211.99 C
ATOM 8 O4' C B 4 -41.936 23.117-124.160 1.00207.33 O
ATOM 9 C3' C B 4 -41.134 24.177-122.303 1.00210.17 C
ATOM 10 O3' C B 4 -41.154 24.456-120.897 1.00217.47 O
ATOM 11 C2' C B 4 -40.110 23.112-122.679 1.00209.32 C
ATOM 12 O2' C B 4 -40.148 21.953-121.881 1.00216.56 O
ATOM 13 C1' C B 4 -40.566 22.759-124.084 1.00205.62 C
ATOM 14 N1 C B 4 -39.728 23.457-125.119 1.00198.86 N
ATOM 15 C2 C B 4 -38.673 22.760-125.735 1.00197.56 C
ATOM 16 O2 C B 4 -38.476 21.585-125.418 1.00201.76 O
ATOM 17 N3 C B 4 -37.895 23.389-126.661 1.00191.96 N
ATOM 18 C4 C B 4 -38.141 24.670-126.970 1.00187.93 C
ATOM 19 N4 C B 4 -37.367 25.258-127.882 1.00183.44 N
ATOM 20 C5 C B 4 -39.204 25.407-126.361 1.00189.11 C
ATOM 21 C6 C B 4 -39.957 24.770-125.452 1.00194.59 C
ATOM 22 P G B 5 -40.248 25.623-120.244 1.00216.78 P
ATOM 23 OP1 G B 5 -40.942 26.060-119.010 1.00222.56 O
ATOM 24 OP2 G B 5 -39.884 26.629-121.274 1.00209.02 O
ATOM 25 O5' G B 5 -38.923 24.853-119.806 1.00219.24 O
TER
ATOM 2 P G A 132 -36.247 12.414-129.295 1.00241.13 P
ATOM 3 OP1 G A 132 -37.238 11.318-129.326 1.00248.29 O
ATOM 4 OP2 G A 132 -35.088 12.348-130.213 1.00237.20 O
ATOM 5 O5' G A 132 -36.980 13.823-129.532 1.00235.57 O
ATOM 6 C5' G A 132 -38.396 13.943-129.501 1.00238.36 C
ATOM 7 C4' G A 132 -38.933 13.743-128.089 1.00245.07 C
ATOM 8 O4' G A 132 -38.207 14.559-127.134 1.00242.70 O
ATOM 9 C3' G A 132 -40.402 14.109-127.942 1.00247.28 C
ATOM 10 O3' G A 132 -41.271 12.945-127.780 1.00256.41 O
ATOM 11 C2' G A 132 -40.455 15.105-126.772 1.00246.14 C
ATOM 12 O2' G A 132 -40.867 14.529-125.549 1.00253.95 O
ATOM 13 C1' G A 132 -39.017 15.608-126.651 1.00241.23 C
ATOM 14 N9 G A 132 -38.690 16.836-127.398 1.00233.22 N
ATOM 15 C8 G A 132 -37.770 16.981-128.416 1.00228.00 C
ATOM 16 N7 G A 132 -37.687 18.192-128.895 1.00222.01 N
ATOM 17 C5 G A 132 -38.611 18.914-128.149 1.00222.72 C
ATOM 18 C6 G A 132 -38.963 20.290-128.209 1.00217.96 C
ATOM 19 O6 G A 132 -38.518 21.173-128.958 1.00212.46 O
ATOM 20 N1 G A 132 -39.943 20.604-127.268 1.00221.30 N
ATOM 21 C2 G A 132 -40.512 19.712-126.379 1.00228.35 C
ATOM 22 N2 G A 132 -41.445 20.186-125.541 1.00231.01 N
ATOM 23 N3 G A 132 -40.184 18.429-126.312 1.00232.83 N
ATOM 24 C4 G A 132 -39.233 18.094-127.222 1.00229.68 C
ATOM 25 P G A 133 -41.337 11.659-128.764 1.00260.49 P
ATOM 26 OP1 G A 133 -42.319 10.711-128.180 1.00270.31 O
ATOM 27 OP2 G A 133 -39.963 11.151-128.934 1.00259.11 O
ATOM 28 O5' G A 133 -41.897 12.115-130.205 1.00254.36 O
TER
ATOM 1 O3' U B 3 -44.448 25.121-125.501 1.00197.80 O
ATOM 2 P C B 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 3 OP1 C B 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 4 OP2 C B 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 5 O5' C B 4 -43.520 25.653-123.203 1.00204.68 O
ATOM 6 C5' C B 4 -43.699 24.257-122.906 1.00211.25 C
ATOM 7 C4' C B 4 -42.386 23.483-122.831 1.00211.99 C
ATOM 8 O4' C B 4 -41.936 23.117-124.160 1.00207.33 O
ATOM 9 C3' C B 4 -41.134 24.177-122.303 1.00210.17 C
ATOM 10 O3' C B 4 -41.154 24.456-120.897 1.00217.47 O
ATOM 11 C2' C B 4 -40.110 23.112-122.679 1.00209.32 C
ATOM 12 O2' C B 4 -40.148 21.953-121.881 1.00216.56 O
ATOM 13 C1' C B 4 -40.566 22.759-124.084 1.00205.62 C
ATOM 14 N1 C B 4 -39.728 23.457-125.119 1.00198.86 N
ATOM 15 C2 C B 4 -38.673 22.760-125.735 1.00197.56 C
ATOM 16 O2 C B 4 -38.476 21.585-125.418 1.00201.76 O
ATOM 17 N3 C B 4 -37.895 23.389-126.661 1.00191.96 N
ATOM 18 C4 C B 4 -38.141 24.670-126.970 1.00187.93 C
ATOM 19 N4 C B 4 -37.367 25.258-127.882 1.00183.44 N
ATOM 20 C5 C B 4 -39.204 25.407-126.361 1.00189.11 C
ATOM 21 C6 C B 4 -39.957 24.770-125.452 1.00194.59 C
ATOM 22 P G B 5 -40.248 25.623-120.244 1.00216.78 P
ATOM 23 OP1 G B 5 -40.942 26.060-119.010 1.00222.56 O
ATOM 24 OP2 G B 5 -39.884 26.629-121.274 1.00209.02 O
ATOM 25 O5' G B 5 -38.923 24.853-119.806 1.00219.24 O
TER
Atoms:
OP1: (-37.238,11.318,-129.326)
OP2: (-35.088,12.348,-130.213)
C3': (-40.402,14.109,-127.942)
C1': (-39.017,15.608,-126.651)
C5': (-38.396,13.943,-129.501)
O6: (-38.518,21.173,-128.958)
O4': (-38.207,14.559,-127.134)
C8: (-37.770,16.981,-128.416)
C2: (-40.512,19.712,-126.379)
C6: (-38.963,20.290,-128.209)
C5: (-38.611,18.914,-128.149)
C4: (-39.233,18.094,-127.222)
P: (-36.247,12.414,-129.295)
C4': (-38.933,13.743,-128.089)
C2': (-40.455,15.105,-126.772)
O2': (-40.867,14.529,-125.549)
N1: (-39.943,20.604,-127.268)
N2: (-41.445,20.186,-125.541)
N3: (-40.184,18.429,-126.312)
N7: (-37.687,18.192,-128.895)
N9: (-38.690,16.836,-127.398)
O5': (-36.980,13.823,-129.532)
O3': (-41.271,12.945,-127.780)
OP2: (-35.088,12.348,-130.213)
C3': (-40.402,14.109,-127.942)
C1': (-39.017,15.608,-126.651)
C5': (-38.396,13.943,-129.501)
O6: (-38.518,21.173,-128.958)
O4': (-38.207,14.559,-127.134)
C8: (-37.770,16.981,-128.416)
C2: (-40.512,19.712,-126.379)
C6: (-38.963,20.290,-128.209)
C5: (-38.611,18.914,-128.149)
C4: (-39.233,18.094,-127.222)
P: (-36.247,12.414,-129.295)
C4': (-38.933,13.743,-128.089)
C2': (-40.455,15.105,-126.772)
O2': (-40.867,14.529,-125.549)
N1: (-39.943,20.604,-127.268)
N2: (-41.445,20.186,-125.541)
N3: (-40.184,18.429,-126.312)
N7: (-37.687,18.192,-128.895)
N9: (-38.690,16.836,-127.398)
O5': (-36.980,13.823,-129.532)
O3': (-41.271,12.945,-127.780)
C2: (-38.673,22.760,-125.735)
OP1: (-44.655,27.410,-124.611)
OP2: (-42.387,26.497,-125.294)
C4: (-38.141,24.670,-126.970)
O5': (-43.520,25.653,-123.203)
C3': (-41.134,24.177,-122.303)
C1': (-40.566,22.759,-124.084)
O4': (-41.936,23.117,-124.160)
C5': (-43.699,24.257,-122.906)
P: (-43.714,26.270,-124.676)
O2: (-38.476,21.585,-125.418)
C4': (-42.386,23.483,-122.831)
C2': (-40.110,23.112,-122.679)
O2': (-40.148,21.953,-121.881)
N1: (-39.728,23.457,-125.119)
N3: (-37.895,23.389,-126.661)
N4: (-37.367,25.258,-127.882)
C6: (-39.957,24.770,-125.452)
C5: (-39.204,25.407,-126.361)
O3': (-41.154,24.456,-120.897)
OP1: (-44.655,27.410,-124.611)
OP2: (-42.387,26.497,-125.294)
C4: (-38.141,24.670,-126.970)
O5': (-43.520,25.653,-123.203)
C3': (-41.134,24.177,-122.303)
C1': (-40.566,22.759,-124.084)
O4': (-41.936,23.117,-124.160)
C5': (-43.699,24.257,-122.906)
P: (-43.714,26.270,-124.676)
O2: (-38.476,21.585,-125.418)
C4': (-42.386,23.483,-122.831)
C2': (-40.110,23.112,-122.679)
O2': (-40.148,21.953,-121.881)
N1: (-39.728,23.457,-125.119)
N3: (-37.895,23.389,-126.661)
N4: (-37.367,25.258,-127.882)
C6: (-39.957,24.770,-125.452)
C5: (-39.204,25.407,-126.361)
O3': (-41.154,24.456,-120.897)
Image (generated by PyMOL):