Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1491:1488
Extra
PDB:
ATOM 1 O3' C A 490 46.440 17.873 -49.524 1.00270.57 O
ATOM 2 P G A 491 47.880 17.152 -49.494 1.00293.80 P
ATOM 3 OP1 G A 491 48.821 18.087 -48.831 1.00293.38 O
ATOM 4 OP2 G A 491 48.172 16.711 -50.880 1.00294.73 O
ATOM 5 O5' G A 491 47.628 15.880 -48.560 1.00293.01 O
ATOM 6 C5' G A 491 48.625 15.423 -47.640 1.00292.24 C
ATOM 7 C4' G A 491 48.498 16.107 -46.297 1.00291.39 C
ATOM 8 O4' G A 491 47.551 17.192 -46.447 1.00291.68 O
ATOM 9 C3' G A 491 47.990 15.218 -45.154 1.00290.53 C
ATOM 10 O3' G A 491 48.953 15.057 -44.075 1.00289.71 O
ATOM 11 C2' G A 491 46.702 15.874 -44.646 1.00290.35 C
ATOM 12 O2' G A 491 46.737 16.247 -43.299 1.00289.47 O
ATOM 13 C1' G A 491 46.486 17.094 -45.521 1.00291.11 C
ATOM 14 N9 G A 491 45.217 17.036 -46.263 1.00291.71 N
ATOM 15 C8 G A 491 44.983 16.528 -47.520 1.00292.55 C
ATOM 16 N7 G A 491 43.736 16.600 -47.898 1.00292.93 N
ATOM 17 C5 G A 491 43.086 17.166 -46.810 1.00292.29 C
ATOM 18 C6 G A 491 41.713 17.485 -46.626 1.00292.33 C
ATOM 19 O6 G A 491 40.774 17.323 -47.421 1.00292.96 O
ATOM 20 N1 G A 491 41.490 18.047 -45.368 1.00291.55 N
ATOM 21 C2 G A 491 42.455 18.275 -44.413 1.00290.83 C
ATOM 22 N2 G A 491 42.042 18.827 -43.261 1.00290.16 N
ATOM 23 N3 G A 491 43.735 17.977 -44.573 1.00290.79 N
ATOM 24 C4 G A 491 43.981 17.428 -45.787 1.00291.53 C
ATOM 25 P G A 492 49.667 16.293 -43.307 1.00233.52 P
ATOM 26 OP1 G A 492 49.155 17.557 -43.892 1.00234.09 O
ATOM 27 OP2 G A 492 51.129 16.033 -43.354 1.00233.44 O
ATOM 28 O5' G A 492 49.147 16.156 -41.788 1.00232.51 O
TER
ATOM 1 O3' C B 487 32.766 17.944 -45.477 1.00236.59 O
ATOM 2 P C B 488 33.553 19.332 -45.245 1.00269.52 P
ATOM 3 OP1 C B 488 32.529 20.400 -45.148 1.00269.74 O
ATOM 4 OP2 C B 488 34.585 19.438 -46.304 1.00270.14 O
ATOM 5 O5' C B 488 34.242 19.117 -43.828 1.00268.42 O
ATOM 6 C5' C B 488 35.053 20.122 -43.256 1.00268.06 C
ATOM 7 C4' C B 488 36.434 19.605 -42.964 1.00267.62 C
ATOM 8 O4' C B 488 36.491 18.169 -43.206 1.00267.58 O
ATOM 9 C3' C B 488 37.538 20.119 -43.857 1.00268.18 C
ATOM 10 O3' C B 488 37.899 21.459 -43.637 1.00268.18 O
ATOM 11 C2' C B 488 38.629 19.104 -43.596 1.00267.73 C
ATOM 12 O2' C B 488 39.133 19.237 -42.272 1.00266.80 O
ATOM 13 C1' C B 488 37.793 17.828 -43.668 1.00267.70 C
ATOM 14 N1 C B 488 37.707 17.321 -45.074 1.00268.61 N
ATOM 15 C2 C B 488 38.539 16.266 -45.434 1.00268.64 C
ATOM 16 O2 C B 488 39.232 15.768 -44.555 1.00267.90 O
ATOM 17 N3 C B 488 38.550 15.783 -46.699 1.00269.47 N
ATOM 18 C4 C B 488 37.779 16.326 -47.633 1.00270.28 C
ATOM 19 N4 C B 488 37.823 15.810 -48.861 1.00271.09 N
ATOM 20 C5 C B 488 36.934 17.427 -47.328 1.00270.30 C
ATOM 21 C6 C B 488 36.946 17.880 -46.066 1.00269.47 C
ATOM 22 P U B 489 37.951 22.455 -44.899 1.00246.17 P
ATOM 23 OP1 U B 489 37.464 23.776 -44.433 1.00246.13 O
ATOM 24 OP2 U B 489 37.232 21.782 -46.014 1.00246.93 O
ATOM 25 O5' U B 489 39.509 22.526 -45.228 1.00246.24 O
TER
ATOM 2 P G A 491 47.880 17.152 -49.494 1.00293.80 P
ATOM 3 OP1 G A 491 48.821 18.087 -48.831 1.00293.38 O
ATOM 4 OP2 G A 491 48.172 16.711 -50.880 1.00294.73 O
ATOM 5 O5' G A 491 47.628 15.880 -48.560 1.00293.01 O
ATOM 6 C5' G A 491 48.625 15.423 -47.640 1.00292.24 C
ATOM 7 C4' G A 491 48.498 16.107 -46.297 1.00291.39 C
ATOM 8 O4' G A 491 47.551 17.192 -46.447 1.00291.68 O
ATOM 9 C3' G A 491 47.990 15.218 -45.154 1.00290.53 C
ATOM 10 O3' G A 491 48.953 15.057 -44.075 1.00289.71 O
ATOM 11 C2' G A 491 46.702 15.874 -44.646 1.00290.35 C
ATOM 12 O2' G A 491 46.737 16.247 -43.299 1.00289.47 O
ATOM 13 C1' G A 491 46.486 17.094 -45.521 1.00291.11 C
ATOM 14 N9 G A 491 45.217 17.036 -46.263 1.00291.71 N
ATOM 15 C8 G A 491 44.983 16.528 -47.520 1.00292.55 C
ATOM 16 N7 G A 491 43.736 16.600 -47.898 1.00292.93 N
ATOM 17 C5 G A 491 43.086 17.166 -46.810 1.00292.29 C
ATOM 18 C6 G A 491 41.713 17.485 -46.626 1.00292.33 C
ATOM 19 O6 G A 491 40.774 17.323 -47.421 1.00292.96 O
ATOM 20 N1 G A 491 41.490 18.047 -45.368 1.00291.55 N
ATOM 21 C2 G A 491 42.455 18.275 -44.413 1.00290.83 C
ATOM 22 N2 G A 491 42.042 18.827 -43.261 1.00290.16 N
ATOM 23 N3 G A 491 43.735 17.977 -44.573 1.00290.79 N
ATOM 24 C4 G A 491 43.981 17.428 -45.787 1.00291.53 C
ATOM 25 P G A 492 49.667 16.293 -43.307 1.00233.52 P
ATOM 26 OP1 G A 492 49.155 17.557 -43.892 1.00234.09 O
ATOM 27 OP2 G A 492 51.129 16.033 -43.354 1.00233.44 O
ATOM 28 O5' G A 492 49.147 16.156 -41.788 1.00232.51 O
TER
ATOM 1 O3' C B 487 32.766 17.944 -45.477 1.00236.59 O
ATOM 2 P C B 488 33.553 19.332 -45.245 1.00269.52 P
ATOM 3 OP1 C B 488 32.529 20.400 -45.148 1.00269.74 O
ATOM 4 OP2 C B 488 34.585 19.438 -46.304 1.00270.14 O
ATOM 5 O5' C B 488 34.242 19.117 -43.828 1.00268.42 O
ATOM 6 C5' C B 488 35.053 20.122 -43.256 1.00268.06 C
ATOM 7 C4' C B 488 36.434 19.605 -42.964 1.00267.62 C
ATOM 8 O4' C B 488 36.491 18.169 -43.206 1.00267.58 O
ATOM 9 C3' C B 488 37.538 20.119 -43.857 1.00268.18 C
ATOM 10 O3' C B 488 37.899 21.459 -43.637 1.00268.18 O
ATOM 11 C2' C B 488 38.629 19.104 -43.596 1.00267.73 C
ATOM 12 O2' C B 488 39.133 19.237 -42.272 1.00266.80 O
ATOM 13 C1' C B 488 37.793 17.828 -43.668 1.00267.70 C
ATOM 14 N1 C B 488 37.707 17.321 -45.074 1.00268.61 N
ATOM 15 C2 C B 488 38.539 16.266 -45.434 1.00268.64 C
ATOM 16 O2 C B 488 39.232 15.768 -44.555 1.00267.90 O
ATOM 17 N3 C B 488 38.550 15.783 -46.699 1.00269.47 N
ATOM 18 C4 C B 488 37.779 16.326 -47.633 1.00270.28 C
ATOM 19 N4 C B 488 37.823 15.810 -48.861 1.00271.09 N
ATOM 20 C5 C B 488 36.934 17.427 -47.328 1.00270.30 C
ATOM 21 C6 C B 488 36.946 17.880 -46.066 1.00269.47 C
ATOM 22 P U B 489 37.951 22.455 -44.899 1.00246.17 P
ATOM 23 OP1 U B 489 37.464 23.776 -44.433 1.00246.13 O
ATOM 24 OP2 U B 489 37.232 21.782 -46.014 1.00246.93 O
ATOM 25 O5' U B 489 39.509 22.526 -45.228 1.00246.24 O
TER
Atoms:
OP1: (48.821,18.087,-48.831)
OP2: (48.172,16.711,-50.880)
C3': (47.990,15.218,-45.154)
C1': (46.486,17.094,-45.521)
C5': (48.625,15.423,-47.640)
O6: (40.774,17.323,-47.421)
O4': (47.551,17.192,-46.447)
C8: (44.983,16.528,-47.520)
C2: (42.455,18.275,-44.413)
C6: (41.713,17.485,-46.626)
C5: (43.086,17.166,-46.810)
C4: (43.981,17.428,-45.787)
P: (47.880,17.152,-49.494)
C4': (48.498,16.107,-46.297)
C2': (46.702,15.874,-44.646)
O2': (46.737,16.247,-43.299)
N1: (41.490,18.047,-45.368)
N2: (42.042,18.827,-43.261)
N3: (43.735,17.977,-44.573)
N7: (43.736,16.600,-47.898)
N9: (45.217,17.036,-46.263)
O5': (47.628,15.880,-48.560)
O3': (48.953,15.057,-44.075)
OP2: (48.172,16.711,-50.880)
C3': (47.990,15.218,-45.154)
C1': (46.486,17.094,-45.521)
C5': (48.625,15.423,-47.640)
O6: (40.774,17.323,-47.421)
O4': (47.551,17.192,-46.447)
C8: (44.983,16.528,-47.520)
C2: (42.455,18.275,-44.413)
C6: (41.713,17.485,-46.626)
C5: (43.086,17.166,-46.810)
C4: (43.981,17.428,-45.787)
P: (47.880,17.152,-49.494)
C4': (48.498,16.107,-46.297)
C2': (46.702,15.874,-44.646)
O2': (46.737,16.247,-43.299)
N1: (41.490,18.047,-45.368)
N2: (42.042,18.827,-43.261)
N3: (43.735,17.977,-44.573)
N7: (43.736,16.600,-47.898)
N9: (45.217,17.036,-46.263)
O5': (47.628,15.880,-48.560)
O3': (48.953,15.057,-44.075)
C2: (38.539,16.266,-45.434)
OP1: (32.529,20.400,-45.148)
OP2: (34.585,19.438,-46.304)
C4: (37.779,16.326,-47.633)
O5': (34.242,19.117,-43.828)
C3': (37.538,20.119,-43.857)
C1': (37.793,17.828,-43.668)
O4': (36.491,18.169,-43.206)
C5': (35.053,20.122,-43.256)
P: (33.553,19.332,-45.245)
O2: (39.232,15.768,-44.555)
C4': (36.434,19.605,-42.964)
C2': (38.629,19.104,-43.596)
O2': (39.133,19.237,-42.272)
N1: (37.707,17.321,-45.074)
N3: (38.550,15.783,-46.699)
N4: (37.823,15.810,-48.861)
C6: (36.946,17.880,-46.066)
C5: (36.934,17.427,-47.328)
O3': (37.899,21.459,-43.637)
OP1: (32.529,20.400,-45.148)
OP2: (34.585,19.438,-46.304)
C4: (37.779,16.326,-47.633)
O5': (34.242,19.117,-43.828)
C3': (37.538,20.119,-43.857)
C1': (37.793,17.828,-43.668)
O4': (36.491,18.169,-43.206)
C5': (35.053,20.122,-43.256)
P: (33.553,19.332,-45.245)
O2: (39.232,15.768,-44.555)
C4': (36.434,19.605,-42.964)
C2': (38.629,19.104,-43.596)
O2': (39.133,19.237,-42.272)
N1: (37.707,17.321,-45.074)
N3: (38.550,15.783,-46.699)
N4: (37.823,15.810,-48.861)
C6: (36.946,17.880,-46.066)
C5: (36.934,17.427,-47.328)
O3': (37.899,21.459,-43.637)
Image (generated by PyMOL):