Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A184:A413
Extra
PDB:
ATOM 1 O3' C A 183 69.040 90.988 26.673 1.00 53.21 O
ATOM 2 P G A 184 69.507 89.787 27.625 1.00 52.67 P
ATOM 3 OP1 G A 184 68.611 89.763 28.806 1.00 52.72 O
ATOM 4 OP2 G A 184 70.968 89.926 27.820 1.00 53.46 O
ATOM 5 O5' G A 184 69.303 88.475 26.746 1.00 54.68 O
ATOM 6 C5' G A 184 68.007 88.034 26.296 1.00 56.46 C
ATOM 7 C4' G A 184 68.147 86.698 25.594 1.00 57.48 C
ATOM 8 O4' G A 184 69.034 86.857 24.454 1.00 58.82 O
ATOM 9 C3' G A 184 68.777 85.583 26.430 1.00 57.45 C
ATOM 10 O3' G A 184 68.279 84.343 25.959 1.00 57.17 O
ATOM 11 C2' G A 184 70.251 85.700 26.074 1.00 58.41 C
ATOM 12 O2' G A 184 71.027 84.549 26.331 1.00 57.91 O
ATOM 13 C1' G A 184 70.129 85.968 24.581 1.00 60.72 C
ATOM 14 N9 G A 184 71.291 86.535 23.901 1.00 63.39 N
ATOM 15 C8 G A 184 72.126 87.545 24.321 1.00 64.68 C
ATOM 16 N7 G A 184 73.082 87.810 23.467 1.00 64.87 N
ATOM 17 C5 G A 184 72.862 86.923 22.423 1.00 65.14 C
ATOM 18 C6 G A 184 73.571 86.734 21.201 1.00 65.14 C
ATOM 19 O6 G A 184 74.567 87.335 20.779 1.00 65.16 O
ATOM 20 N1 G A 184 72.999 85.723 20.433 1.00 65.92 N
ATOM 21 C2 G A 184 71.885 84.987 20.786 1.00 66.78 C
ATOM 22 N2 G A 184 71.486 84.028 19.918 1.00 66.32 N
ATOM 23 N3 G A 184 71.211 85.167 21.911 1.00 66.53 N
ATOM 24 C4 G A 184 71.756 86.137 22.676 1.00 65.24 C
ATOM 25 P C A 185 67.261 83.494 26.865 1.00 58.23 P
ATOM 26 OP1 C A 185 66.847 84.359 28.013 1.00 57.73 O
ATOM 27 OP2 C A 185 67.851 82.153 27.134 1.00 56.76 O
ATOM 28 O5' C A 185 66.013 83.290 25.897 1.00 58.29 O
TER
ATOM 1 O3' C B 412 76.521 78.444 14.296 1.00 63.89 O
ATOM 2 P U B 413 76.374 79.824 13.443 1.00 63.94 P
ATOM 3 OP1 U B 413 75.477 79.570 12.293 1.00 63.85 O
ATOM 4 OP2 U B 413 77.689 80.484 13.213 1.00 63.14 O
ATOM 5 O5' U B 413 75.548 80.801 14.385 1.00 64.09 O
ATOM 6 C5' U B 413 74.193 80.506 14.773 1.00 63.22 C
ATOM 7 C4' U B 413 73.724 81.514 15.797 1.00 61.99 C
ATOM 8 O4' U B 413 74.418 81.303 17.060 1.00 62.36 O
ATOM 9 C3' U B 413 73.995 82.973 15.464 1.00 60.85 C
ATOM 10 O3' U B 413 73.054 83.538 14.543 1.00 60.32 O
ATOM 11 C2' U B 413 73.905 83.599 16.841 1.00 61.09 C
ATOM 12 O2' U B 413 72.550 83.678 17.235 1.00 60.59 O
ATOM 13 C1' U B 413 74.646 82.555 17.691 1.00 62.50 C
ATOM 14 N1 U B 413 76.105 82.790 17.718 1.00 63.88 N
ATOM 15 C2 U B 413 76.625 83.815 18.529 1.00 64.85 C
ATOM 16 O2 U B 413 75.951 84.478 19.291 1.00 65.38 O
ATOM 17 N3 U B 413 77.981 84.019 18.409 1.00 65.64 N
ATOM 18 C4 U B 413 78.863 83.310 17.604 1.00 65.83 C
ATOM 19 O4 U B 413 80.059 83.618 17.582 1.00 65.70 O
ATOM 20 C5 U B 413 78.261 82.254 16.847 1.00 65.10 C
ATOM 21 C6 U B 413 76.946 82.035 16.930 1.00 64.68 C
ATOM 22 P G B 414 73.472 84.833 13.667 1.00 59.75 P
ATOM 23 OP1 G B 414 72.310 85.201 12.818 1.00 59.79 O
ATOM 24 OP2 G B 414 74.796 84.569 13.038 1.00 58.14 O
ATOM 25 O5' G B 414 73.636 85.995 14.744 1.00 61.22 O
TER
ATOM 2 P G A 184 69.507 89.787 27.625 1.00 52.67 P
ATOM 3 OP1 G A 184 68.611 89.763 28.806 1.00 52.72 O
ATOM 4 OP2 G A 184 70.968 89.926 27.820 1.00 53.46 O
ATOM 5 O5' G A 184 69.303 88.475 26.746 1.00 54.68 O
ATOM 6 C5' G A 184 68.007 88.034 26.296 1.00 56.46 C
ATOM 7 C4' G A 184 68.147 86.698 25.594 1.00 57.48 C
ATOM 8 O4' G A 184 69.034 86.857 24.454 1.00 58.82 O
ATOM 9 C3' G A 184 68.777 85.583 26.430 1.00 57.45 C
ATOM 10 O3' G A 184 68.279 84.343 25.959 1.00 57.17 O
ATOM 11 C2' G A 184 70.251 85.700 26.074 1.00 58.41 C
ATOM 12 O2' G A 184 71.027 84.549 26.331 1.00 57.91 O
ATOM 13 C1' G A 184 70.129 85.968 24.581 1.00 60.72 C
ATOM 14 N9 G A 184 71.291 86.535 23.901 1.00 63.39 N
ATOM 15 C8 G A 184 72.126 87.545 24.321 1.00 64.68 C
ATOM 16 N7 G A 184 73.082 87.810 23.467 1.00 64.87 N
ATOM 17 C5 G A 184 72.862 86.923 22.423 1.00 65.14 C
ATOM 18 C6 G A 184 73.571 86.734 21.201 1.00 65.14 C
ATOM 19 O6 G A 184 74.567 87.335 20.779 1.00 65.16 O
ATOM 20 N1 G A 184 72.999 85.723 20.433 1.00 65.92 N
ATOM 21 C2 G A 184 71.885 84.987 20.786 1.00 66.78 C
ATOM 22 N2 G A 184 71.486 84.028 19.918 1.00 66.32 N
ATOM 23 N3 G A 184 71.211 85.167 21.911 1.00 66.53 N
ATOM 24 C4 G A 184 71.756 86.137 22.676 1.00 65.24 C
ATOM 25 P C A 185 67.261 83.494 26.865 1.00 58.23 P
ATOM 26 OP1 C A 185 66.847 84.359 28.013 1.00 57.73 O
ATOM 27 OP2 C A 185 67.851 82.153 27.134 1.00 56.76 O
ATOM 28 O5' C A 185 66.013 83.290 25.897 1.00 58.29 O
TER
ATOM 1 O3' C B 412 76.521 78.444 14.296 1.00 63.89 O
ATOM 2 P U B 413 76.374 79.824 13.443 1.00 63.94 P
ATOM 3 OP1 U B 413 75.477 79.570 12.293 1.00 63.85 O
ATOM 4 OP2 U B 413 77.689 80.484 13.213 1.00 63.14 O
ATOM 5 O5' U B 413 75.548 80.801 14.385 1.00 64.09 O
ATOM 6 C5' U B 413 74.193 80.506 14.773 1.00 63.22 C
ATOM 7 C4' U B 413 73.724 81.514 15.797 1.00 61.99 C
ATOM 8 O4' U B 413 74.418 81.303 17.060 1.00 62.36 O
ATOM 9 C3' U B 413 73.995 82.973 15.464 1.00 60.85 C
ATOM 10 O3' U B 413 73.054 83.538 14.543 1.00 60.32 O
ATOM 11 C2' U B 413 73.905 83.599 16.841 1.00 61.09 C
ATOM 12 O2' U B 413 72.550 83.678 17.235 1.00 60.59 O
ATOM 13 C1' U B 413 74.646 82.555 17.691 1.00 62.50 C
ATOM 14 N1 U B 413 76.105 82.790 17.718 1.00 63.88 N
ATOM 15 C2 U B 413 76.625 83.815 18.529 1.00 64.85 C
ATOM 16 O2 U B 413 75.951 84.478 19.291 1.00 65.38 O
ATOM 17 N3 U B 413 77.981 84.019 18.409 1.00 65.64 N
ATOM 18 C4 U B 413 78.863 83.310 17.604 1.00 65.83 C
ATOM 19 O4 U B 413 80.059 83.618 17.582 1.00 65.70 O
ATOM 20 C5 U B 413 78.261 82.254 16.847 1.00 65.10 C
ATOM 21 C6 U B 413 76.946 82.035 16.930 1.00 64.68 C
ATOM 22 P G B 414 73.472 84.833 13.667 1.00 59.75 P
ATOM 23 OP1 G B 414 72.310 85.201 12.818 1.00 59.79 O
ATOM 24 OP2 G B 414 74.796 84.569 13.038 1.00 58.14 O
ATOM 25 O5' G B 414 73.636 85.995 14.744 1.00 61.22 O
TER
Atoms:
OP1: (68.611,89.763,28.806)
OP2: (70.968,89.926,27.820)
C3': (68.777,85.583,26.430)
C1': (70.129,85.968,24.581)
C5': (68.007,88.034,26.296)
O6: (74.567,87.335,20.779)
O4': (69.034,86.857,24.454)
C8: (72.126,87.545,24.321)
C2: (71.885,84.987,20.786)
C6: (73.571,86.734,21.201)
C5: (72.862,86.923,22.423)
C4: (71.756,86.137,22.676)
P: (69.507,89.787,27.625)
C4': (68.147,86.698,25.594)
C2': (70.251,85.700,26.074)
O2': (71.027,84.549,26.331)
N1: (72.999,85.723,20.433)
N2: (71.486,84.028,19.918)
N3: (71.211,85.167,21.911)
N7: (73.082,87.810,23.467)
N9: (71.291,86.535,23.901)
O5': (69.303,88.475,26.746)
O3': (68.279,84.343,25.959)
OP2: (70.968,89.926,27.820)
C3': (68.777,85.583,26.430)
C1': (70.129,85.968,24.581)
C5': (68.007,88.034,26.296)
O6: (74.567,87.335,20.779)
O4': (69.034,86.857,24.454)
C8: (72.126,87.545,24.321)
C2: (71.885,84.987,20.786)
C6: (73.571,86.734,21.201)
C5: (72.862,86.923,22.423)
C4: (71.756,86.137,22.676)
P: (69.507,89.787,27.625)
C4': (68.147,86.698,25.594)
C2': (70.251,85.700,26.074)
O2': (71.027,84.549,26.331)
N1: (72.999,85.723,20.433)
N2: (71.486,84.028,19.918)
N3: (71.211,85.167,21.911)
N7: (73.082,87.810,23.467)
N9: (71.291,86.535,23.901)
O5': (69.303,88.475,26.746)
O3': (68.279,84.343,25.959)
C4: (78.863,83.310,17.604)
N3: (77.981,84.019,18.409)
OP1: (75.477,79.570,12.293)
OP2: (77.689,80.484,13.213)
C2: (76.625,83.815,18.529)
C1': (74.646,82.555,17.691)
C3': (73.995,82.973,15.464)
O5': (75.548,80.801,14.385)
O4': (74.418,81.303,17.060)
C5': (74.193,80.506,14.773)
P: (76.374,79.824,13.443)
C4': (73.724,81.514,15.797)
C2': (73.905,83.599,16.841)
O2': (72.550,83.678,17.235)
N1: (76.105,82.790,17.718)
O4: (80.059,83.618,17.582)
O2: (75.951,84.478,19.291)
C6: (76.946,82.035,16.930)
C5: (78.261,82.254,16.847)
O3': (73.054,83.538,14.543)
N3: (77.981,84.019,18.409)
OP1: (75.477,79.570,12.293)
OP2: (77.689,80.484,13.213)
C2: (76.625,83.815,18.529)
C1': (74.646,82.555,17.691)
C3': (73.995,82.973,15.464)
O5': (75.548,80.801,14.385)
O4': (74.418,81.303,17.060)
C5': (74.193,80.506,14.773)
P: (76.374,79.824,13.443)
C4': (73.724,81.514,15.797)
C2': (73.905,83.599,16.841)
O2': (72.550,83.678,17.235)
N1: (76.105,82.790,17.718)
O4: (80.059,83.618,17.582)
O2: (75.951,84.478,19.291)
C6: (76.946,82.035,16.930)
C5: (78.261,82.254,16.847)
O3': (73.054,83.538,14.543)
Image (generated by PyMOL):