Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1588:A1237
Extra
PDB:
ATOM 1 O3' C A1587 -36.417 -66.153 3.205 1.00 28.28 O
ATOM 2 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 3 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 4 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 5 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
ATOM 6 C5' G A1588 -36.224 -69.262 2.887 1.00 0.79 C
ATOM 7 C4' G A1588 -36.777 -70.651 3.006 1.00 0.79 C
ATOM 8 O4' G A1588 -35.707 -71.579 3.278 1.00 0.79 O
ATOM 9 C3' G A1588 -37.799 -70.827 4.106 1.00 0.79 C
ATOM 10 O3' G A1588 -38.831 -71.666 3.638 1.00 0.79 O
ATOM 11 C2' G A1588 -36.988 -71.385 5.279 1.00 0.79 C
ATOM 12 O2' G A1588 -37.719 -72.304 6.057 1.00 0.79 O
ATOM 13 C1' G A1588 -35.780 -72.047 4.607 1.00 0.79 C
ATOM 14 N9 G A1588 -34.483 -71.712 5.192 1.00 37.85 N
ATOM 15 C8 G A1588 -34.169 -70.639 5.985 1.00 37.85 C
ATOM 16 N7 G A1588 -32.889 -70.531 6.216 1.00 37.85 N
ATOM 17 C5 G A1588 -32.332 -71.614 5.565 1.00 37.85 C
ATOM 18 C6 G A1588 -30.988 -71.994 5.428 1.00 37.85 C
ATOM 19 O6 G A1588 -29.979 -71.422 5.853 1.00 37.85 O
ATOM 20 N1 G A1588 -30.861 -73.161 4.687 1.00 37.85 N
ATOM 21 C2 G A1588 -31.899 -73.857 4.128 1.00 37.85 C
ATOM 22 N2 G A1588 -31.569 -74.948 3.427 1.00 37.85 N
ATOM 23 N3 G A1588 -33.163 -73.505 4.240 1.00 37.85 N
ATOM 24 C4 G A1588 -33.305 -72.377 4.964 1.00 37.85 C
ATOM 25 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 26 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 27 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 28 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
TER
ATOM 1 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 2 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 3 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 4 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 5 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
ATOM 6 C5' U B1237 -28.523 -77.268 -1.052 1.00 2.45 C
ATOM 7 C4' U B1237 -29.476 -76.595 -0.104 1.00 2.45 C
ATOM 8 O4' U B1237 -30.839 -76.922 -0.472 1.00 2.45 O
ATOM 9 C3' U B1237 -29.311 -76.923 1.375 1.00 2.45 C
ATOM 10 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 11 C2' U B1237 -30.527 -77.797 1.677 1.00 2.45 C
ATOM 12 O2' U B1237 -31.019 -77.589 2.980 1.00 2.45 O
ATOM 13 C1' U B1237 -31.556 -77.273 0.686 1.00 2.45 C
ATOM 14 N1 U B1237 -32.606 -78.241 0.340 1.00 39.06 N
ATOM 15 C2 U B1237 -33.860 -78.045 0.885 1.00 39.06 C
ATOM 16 O2 U B1237 -34.134 -77.107 1.607 1.00 39.06 O
ATOM 17 N3 U B1237 -34.787 -78.989 0.559 1.00 39.06 N
ATOM 18 C4 U B1237 -34.601 -80.082 -0.237 1.00 39.06 C
ATOM 19 O4 U B1237 -35.534 -80.868 -0.409 1.00 39.06 O
ATOM 20 C5 U B1237 -33.288 -80.207 -0.779 1.00 39.06 C
ATOM 21 C6 U B1237 -32.359 -79.302 -0.479 1.00 39.06 C
ATOM 22 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 23 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 24 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 25 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
TER
ATOM 2 P G A1588 -37.660 -67.150 3.390 1.00 30.39 P
ATOM 3 OP1 G A1588 -38.868 -66.567 2.752 1.00 40.70 O
ATOM 4 OP2 G A1588 -37.709 -67.568 4.813 1.00 40.70 O
ATOM 5 O5' G A1588 -37.267 -68.385 2.485 1.00 0.79 O
ATOM 6 C5' G A1588 -36.224 -69.262 2.887 1.00 0.79 C
ATOM 7 C4' G A1588 -36.777 -70.651 3.006 1.00 0.79 C
ATOM 8 O4' G A1588 -35.707 -71.579 3.278 1.00 0.79 O
ATOM 9 C3' G A1588 -37.799 -70.827 4.106 1.00 0.79 C
ATOM 10 O3' G A1588 -38.831 -71.666 3.638 1.00 0.79 O
ATOM 11 C2' G A1588 -36.988 -71.385 5.279 1.00 0.79 C
ATOM 12 O2' G A1588 -37.719 -72.304 6.057 1.00 0.79 O
ATOM 13 C1' G A1588 -35.780 -72.047 4.607 1.00 0.79 C
ATOM 14 N9 G A1588 -34.483 -71.712 5.192 1.00 37.85 N
ATOM 15 C8 G A1588 -34.169 -70.639 5.985 1.00 37.85 C
ATOM 16 N7 G A1588 -32.889 -70.531 6.216 1.00 37.85 N
ATOM 17 C5 G A1588 -32.332 -71.614 5.565 1.00 37.85 C
ATOM 18 C6 G A1588 -30.988 -71.994 5.428 1.00 37.85 C
ATOM 19 O6 G A1588 -29.979 -71.422 5.853 1.00 37.85 O
ATOM 20 N1 G A1588 -30.861 -73.161 4.687 1.00 37.85 N
ATOM 21 C2 G A1588 -31.899 -73.857 4.128 1.00 37.85 C
ATOM 22 N2 G A1588 -31.569 -74.948 3.427 1.00 37.85 N
ATOM 23 N3 G A1588 -33.163 -73.505 4.240 1.00 37.85 N
ATOM 24 C4 G A1588 -33.305 -72.377 4.964 1.00 37.85 C
ATOM 25 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 26 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 27 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 28 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
TER
ATOM 1 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 2 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 3 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 4 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 5 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
ATOM 6 C5' U B1237 -28.523 -77.268 -1.052 1.00 2.45 C
ATOM 7 C4' U B1237 -29.476 -76.595 -0.104 1.00 2.45 C
ATOM 8 O4' U B1237 -30.839 -76.922 -0.472 1.00 2.45 O
ATOM 9 C3' U B1237 -29.311 -76.923 1.375 1.00 2.45 C
ATOM 10 O3' U B1237 -29.325 -75.727 2.142 1.00 2.45 O
ATOM 11 C2' U B1237 -30.527 -77.797 1.677 1.00 2.45 C
ATOM 12 O2' U B1237 -31.019 -77.589 2.980 1.00 2.45 O
ATOM 13 C1' U B1237 -31.556 -77.273 0.686 1.00 2.45 C
ATOM 14 N1 U B1237 -32.606 -78.241 0.340 1.00 39.06 N
ATOM 15 C2 U B1237 -33.860 -78.045 0.885 1.00 39.06 C
ATOM 16 O2 U B1237 -34.134 -77.107 1.607 1.00 39.06 O
ATOM 17 N3 U B1237 -34.787 -78.989 0.559 1.00 39.06 N
ATOM 18 C4 U B1237 -34.601 -80.082 -0.237 1.00 39.06 C
ATOM 19 O4 U B1237 -35.534 -80.868 -0.409 1.00 39.06 O
ATOM 20 C5 U B1237 -33.288 -80.207 -0.779 1.00 39.06 C
ATOM 21 C6 U B1237 -32.359 -79.302 -0.479 1.00 39.06 C
ATOM 22 P C B1238 -27.958 -74.901 2.353 1.00 18.90 P
ATOM 23 OP1 C B1238 -28.293 -73.751 3.209 1.00 23.60 O
ATOM 24 OP2 C B1238 -27.311 -74.662 1.049 1.00 23.60 O
ATOM 25 O5' C B1238 -27.005 -75.869 3.176 1.00 8.40 O
TER
Atoms:
OP1: (-38.868,-66.567,2.752)
OP2: (-37.709,-67.568,4.813)
C3': (-37.799,-70.827,4.106)
C1': (-35.780,-72.047,4.607)
C5': (-36.224,-69.262,2.887)
O6: (-29.979,-71.422,5.853)
O4': (-35.707,-71.579,3.278)
C8: (-34.169,-70.639,5.985)
C2: (-31.899,-73.857,4.128)
C6: (-30.988,-71.994,5.428)
C5: (-32.332,-71.614,5.565)
C4: (-33.305,-72.377,4.964)
P: (-37.660,-67.150,3.390)
C4': (-36.777,-70.651,3.006)
C2': (-36.988,-71.385,5.279)
O2': (-37.719,-72.304,6.057)
N1: (-30.861,-73.161,4.687)
N2: (-31.569,-74.948,3.427)
N3: (-33.163,-73.505,4.240)
N7: (-32.889,-70.531,6.216)
N9: (-34.483,-71.712,5.192)
O5': (-37.267,-68.385,2.485)
O3': (-38.831,-71.666,3.638)
OP2: (-37.709,-67.568,4.813)
C3': (-37.799,-70.827,4.106)
C1': (-35.780,-72.047,4.607)
C5': (-36.224,-69.262,2.887)
O6: (-29.979,-71.422,5.853)
O4': (-35.707,-71.579,3.278)
C8: (-34.169,-70.639,5.985)
C2: (-31.899,-73.857,4.128)
C6: (-30.988,-71.994,5.428)
C5: (-32.332,-71.614,5.565)
C4: (-33.305,-72.377,4.964)
P: (-37.660,-67.150,3.390)
C4': (-36.777,-70.651,3.006)
C2': (-36.988,-71.385,5.279)
O2': (-37.719,-72.304,6.057)
N1: (-30.861,-73.161,4.687)
N2: (-31.569,-74.948,3.427)
N3: (-33.163,-73.505,4.240)
N7: (-32.889,-70.531,6.216)
N9: (-34.483,-71.712,5.192)
O5': (-37.267,-68.385,2.485)
O3': (-38.831,-71.666,3.638)
C4: (-34.601,-80.082,-0.237)
N3: (-34.787,-78.989,0.559)
OP1: (-26.627,-79.112,-2.382)
OP2: (-28.322,-81.004,-1.933)
C2: (-33.860,-78.045,0.885)
C1': (-31.556,-77.273,0.686)
C3': (-29.311,-76.923,1.375)
O5': (-28.666,-78.700,-1.010)
O4': (-30.839,-76.922,-0.472)
C5': (-28.523,-77.268,-1.052)
P: (-28.031,-79.569,-2.179)
C4': (-29.476,-76.595,-0.104)
C2': (-30.527,-77.797,1.677)
O2': (-31.019,-77.589,2.980)
N1: (-32.606,-78.241,0.340)
O4: (-35.534,-80.868,-0.409)
O2: (-34.134,-77.107,1.607)
C6: (-32.359,-79.302,-0.479)
C5: (-33.288,-80.207,-0.779)
O3': (-29.325,-75.727,2.142)
N3: (-34.787,-78.989,0.559)
OP1: (-26.627,-79.112,-2.382)
OP2: (-28.322,-81.004,-1.933)
C2: (-33.860,-78.045,0.885)
C1': (-31.556,-77.273,0.686)
C3': (-29.311,-76.923,1.375)
O5': (-28.666,-78.700,-1.010)
O4': (-30.839,-76.922,-0.472)
C5': (-28.523,-77.268,-1.052)
P: (-28.031,-79.569,-2.179)
C4': (-29.476,-76.595,-0.104)
C2': (-30.527,-77.797,1.677)
O2': (-31.019,-77.589,2.980)
N1: (-32.606,-78.241,0.340)
O4: (-35.534,-80.868,-0.409)
O2: (-34.134,-77.107,1.607)
C6: (-32.359,-79.302,-0.479)
C5: (-33.288,-80.207,-0.779)
O3': (-29.325,-75.727,2.142)
Image (generated by PyMOL):