ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:P46:P50

Extra

PDB:
ATOM 1 O3' A A 45 38.484 35.872 4.246 1.00 59.98 O
ATOM 2 P G A 46 38.486 34.963 2.931 1.00 60.81 P
ATOM 3 OP1 G A 46 39.883 34.823 2.461 1.00 60.91 O
ATOM 4 OP2 G A 46 37.456 35.490 2.008 1.00 60.92 O
ATOM 5 O5' G A 46 38.002 33.544 3.476 1.00 61.13 O
ATOM 6 C5' G A 46 38.728 32.852 4.487 1.00 61.88 C
ATOM 7 C4' G A 46 37.867 31.740 5.057 1.00 62.61 C
ATOM 8 O4' G A 46 36.632 32.305 5.553 1.00 62.07 O
ATOM 9 C3' G A 46 37.457 30.686 4.038 1.00 63.23 C
ATOM 10 O3' G A 46 38.354 29.600 4.125 1.00 64.89 O
ATOM 11 C2' G A 46 36.045 30.280 4.449 1.00 62.47 C
ATOM 12 O2' G A 46 36.013 29.192 5.352 1.00 63.10 O
ATOM 13 C1' G A 46 35.526 31.519 5.157 1.00 61.23 C
ATOM 14 N9 G A 46 34.634 32.336 4.344 1.00 59.62 N
ATOM 15 C8 G A 46 34.922 33.532 3.729 1.00 59.32 C
ATOM 16 N7 G A 46 33.913 34.040 3.077 1.00 58.81 N
ATOM 17 C5 G A 46 32.891 33.123 3.277 1.00 58.16 C
ATOM 18 C6 G A 46 31.557 33.137 2.817 1.00 57.42 C
ATOM 19 O6 G A 46 31.014 33.997 2.116 1.00 57.27 O
ATOM 20 N1 G A 46 30.841 32.016 3.240 1.00 57.27 N
ATOM 21 C2 G A 46 31.362 31.005 4.019 1.00 57.41 C
ATOM 22 N2 G A 46 30.537 30.000 4.335 1.00 57.44 N
ATOM 23 N3 G A 46 32.613 30.981 4.462 1.00 57.78 N
ATOM 24 C4 G A 46 33.317 32.068 4.056 1.00 58.62 C
ATOM 25 P A A 47 38.978 28.982 2.796 1.00 66.46 P
ATOM 26 OP1 A A 47 40.146 28.165 3.200 1.00 66.67 O
ATOM 27 OP2 A A 47 39.145 30.061 1.794 1.00 66.35 O
ATOM 28 O5' A A 47 37.822 27.998 2.302 1.00 66.81 O
TER

ATOM 1 O3' U B 49 26.361 24.524 6.010 1.00 77.40 O
ATOM 2 P U B 50 27.423 25.281 6.932 1.00 75.37 P
ATOM 3 OP1 U B 50 28.630 25.548 6.120 1.00 75.30 O
ATOM 4 OP2 U B 50 27.539 24.495 8.176 1.00 75.69 O
ATOM 5 O5' U B 50 26.738 26.677 7.314 1.00 73.82 O
ATOM 6 C5' U B 50 25.408 27.011 6.930 1.00 71.11 C
ATOM 7 C4' U B 50 25.341 28.414 6.339 1.00 69.10 C
ATOM 8 O4' U B 50 26.178 29.334 7.089 1.00 68.14 O
ATOM 9 C3' U B 50 25.782 28.530 4.882 1.00 68.26 C
ATOM 10 O3' U B 50 24.934 29.447 4.185 1.00 68.25 O
ATOM 11 C2' U B 50 27.215 29.049 4.996 1.00 67.64 C
ATOM 12 O2' U B 50 27.615 29.791 3.861 1.00 67.07 O
ATOM 13 C1' U B 50 27.125 29.945 6.233 1.00 67.31 C
ATOM 14 N1 U B 50 28.415 30.134 6.988 1.00 66.44 N
ATOM 15 C2 U B 50 29.177 31.275 6.794 1.00 66.08 C
ATOM 16 O2 U B 50 28.882 32.173 6.025 1.00 66.07 O
ATOM 17 N3 U B 50 30.332 31.335 7.538 1.00 65.75 N
ATOM 18 C4 U B 50 30.798 30.400 8.445 1.00 65.73 C
ATOM 19 O4 U B 50 31.854 30.596 9.038 1.00 65.70 O
ATOM 20 C5 U B 50 29.955 29.243 8.600 1.00 66.02 C
ATOM 21 C6 U B 50 28.825 29.159 7.883 1.00 66.36 C
ATOM 22 P C B 51 23.496 29.025 3.619 1.00 68.57 P
ATOM 23 OP1 C B 51 23.064 30.091 2.687 1.00 68.63 O
ATOM 24 OP2 C B 51 22.620 28.653 4.753 1.00 68.76 O
ATOM 25 O5' C B 51 23.805 27.701 2.782 1.00 69.56 O
TER

Atoms:
OP1: (39.883,34.823,2.461)
OP2: (37.456,35.490,2.008)
C3': (37.457,30.686,4.038)
C1': (35.526,31.519,5.157)
C5': (38.728,32.852,4.487)
O6: (31.014,33.997,2.116)
O4': (36.632,32.305,5.553)
C8: (34.922,33.532,3.729)
C2: (31.362,31.005,4.019)
C6: (31.557,33.137,2.817)
C5: (32.891,33.123,3.277)
C4: (33.317,32.068,4.056)
P: (38.486,34.963,2.931)
C4': (37.867,31.740,5.057)
C2': (36.045,30.280,4.449)
O2': (36.013,29.192,5.352)
N1: (30.841,32.016,3.240)
N2: (30.537,30.000,4.335)
N3: (32.613,30.981,4.462)
N7: (33.913,34.040,3.077)
N9: (34.634,32.336,4.344)
O5': (38.002,33.544,3.476)
O3': (38.354,29.600,4.125)
C4: (30.798,30.400,8.445)
N3: (30.332,31.335,7.538)
OP1: (28.630,25.548,6.120)
OP2: (27.539,24.495,8.176)
C2: (29.177,31.275,6.794)
C1': (27.125,29.945,6.233)
C3': (25.782,28.530,4.882)
O5': (26.738,26.677,7.314)
O4': (26.178,29.334,7.089)
C5': (25.408,27.011,6.930)
P: (27.423,25.281,6.932)
C4': (25.341,28.414,6.339)
C2': (27.215,29.049,4.996)
O2': (27.615,29.791,3.861)
N1: (28.415,30.134,6.988)
O4: (31.854,30.596,9.038)
O2: (28.882,32.173,6.025)
C6: (28.825,29.159,7.883)
C5: (29.955,29.243,8.600)
O3': (24.934,29.447,4.185)
Image (generated by PyMOL):
PyMOL image
show in jmol