Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1588:A1237
Extra
PDB:
ATOM 1 O3' C A1587 37.030 -65.208 -2.945 1.00 28.76 O
ATOM 2 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 3 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 4 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 5 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
ATOM 6 C5' G A1588 36.539 -68.467 -2.346 1.00 24.78 C
ATOM 7 C4' G A1588 37.190 -69.801 -2.469 1.00 24.55 C
ATOM 8 O4' G A1588 36.168 -70.769 -2.737 1.00 33.75 O
ATOM 9 C3' G A1588 38.184 -69.928 -3.593 1.00 27.77 C
ATOM 10 O3' G A1588 39.165 -70.909 -3.247 1.00 33.32 O
ATOM 11 C2' G A1588 37.317 -70.407 -4.775 1.00 33.11 C
ATOM 12 O2' G A1588 37.990 -71.193 -5.760 1.00 33.90 O
ATOM 13 C1' G A1588 36.212 -71.195 -4.092 1.00 33.66 C
ATOM 14 N9 G A1588 34.904 -70.919 -4.638 1.00 27.67 N
ATOM 15 C8 G A1588 34.531 -69.779 -5.269 1.00 27.48 C
ATOM 16 N7 G A1588 33.265 -69.764 -5.571 1.00 36.18 N
ATOM 17 C5 G A1588 32.782 -70.955 -5.057 1.00 37.84 C
ATOM 18 C6 G A1588 31.473 -71.488 -5.056 1.00 32.26 C
ATOM 19 O6 G A1588 30.475 -70.980 -5.550 1.00 34.03 O
ATOM 20 N1 G A1588 31.410 -72.732 -4.426 1.00 38.62 N
ATOM 21 C2 G A1588 32.494 -73.379 -3.859 1.00 43.69 C
ATOM 22 N2 G A1588 32.257 -74.575 -3.294 1.00 40.28 N
ATOM 23 N3 G A1588 33.726 -72.884 -3.840 1.00 40.39 N
ATOM 24 C4 G A1588 33.789 -71.681 -4.461 1.00 37.75 C
ATOM 25 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 26 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 27 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 28 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
TER
ATOM 1 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 2 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 3 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 4 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 5 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
ATOM 6 C5' U B1237 29.143 -76.528 1.288 1.00 39.41 C
ATOM 7 C4' U B1237 29.978 -75.756 0.313 1.00 35.80 C
ATOM 8 O4' U B1237 31.384 -75.992 0.607 1.00 38.52 O
ATOM 9 C3' U B1237 29.761 -76.141 -1.143 1.00 29.13 C
ATOM 10 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 11 C2' U B1237 30.955 -77.021 -1.449 1.00 30.28 C
ATOM 12 O2' U B1237 31.325 -77.024 -2.806 1.00 34.76 O
ATOM 13 C1' U B1237 32.041 -76.411 -0.560 1.00 35.50 C
ATOM 14 N1 U B1237 33.083 -77.364 -0.178 1.00 31.75 N
ATOM 15 C2 U B1237 34.384 -77.179 -0.612 1.00 33.34 C
ATOM 16 O2 U B1237 34.753 -76.229 -1.281 1.00 31.25 O
ATOM 17 N3 U B1237 35.260 -78.159 -0.240 1.00 31.53 N
ATOM 18 C4 U B1237 34.979 -79.272 0.497 1.00 36.70 C
ATOM 19 O4 U B1237 35.886 -80.062 0.760 1.00 38.40 O
ATOM 20 C5 U B1237 33.607 -79.375 0.903 1.00 44.86 C
ATOM 21 C6 U B1237 32.713 -78.446 0.560 1.00 36.91 C
ATOM 22 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 23 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 24 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 25 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
TER
ATOM 2 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 3 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 4 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 5 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
ATOM 6 C5' G A1588 36.539 -68.467 -2.346 1.00 24.78 C
ATOM 7 C4' G A1588 37.190 -69.801 -2.469 1.00 24.55 C
ATOM 8 O4' G A1588 36.168 -70.769 -2.737 1.00 33.75 O
ATOM 9 C3' G A1588 38.184 -69.928 -3.593 1.00 27.77 C
ATOM 10 O3' G A1588 39.165 -70.909 -3.247 1.00 33.32 O
ATOM 11 C2' G A1588 37.317 -70.407 -4.775 1.00 33.11 C
ATOM 12 O2' G A1588 37.990 -71.193 -5.760 1.00 33.90 O
ATOM 13 C1' G A1588 36.212 -71.195 -4.092 1.00 33.66 C
ATOM 14 N9 G A1588 34.904 -70.919 -4.638 1.00 27.67 N
ATOM 15 C8 G A1588 34.531 -69.779 -5.269 1.00 27.48 C
ATOM 16 N7 G A1588 33.265 -69.764 -5.571 1.00 36.18 N
ATOM 17 C5 G A1588 32.782 -70.955 -5.057 1.00 37.84 C
ATOM 18 C6 G A1588 31.473 -71.488 -5.056 1.00 32.26 C
ATOM 19 O6 G A1588 30.475 -70.980 -5.550 1.00 34.03 O
ATOM 20 N1 G A1588 31.410 -72.732 -4.426 1.00 38.62 N
ATOM 21 C2 G A1588 32.494 -73.379 -3.859 1.00 43.69 C
ATOM 22 N2 G A1588 32.257 -74.575 -3.294 1.00 40.28 N
ATOM 23 N3 G A1588 33.726 -72.884 -3.840 1.00 40.39 N
ATOM 24 C4 G A1588 33.789 -71.681 -4.461 1.00 37.75 C
ATOM 25 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 26 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 27 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 28 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
TER
ATOM 1 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 2 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 3 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 4 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 5 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
ATOM 6 C5' U B1237 29.143 -76.528 1.288 1.00 39.41 C
ATOM 7 C4' U B1237 29.978 -75.756 0.313 1.00 35.80 C
ATOM 8 O4' U B1237 31.384 -75.992 0.607 1.00 38.52 O
ATOM 9 C3' U B1237 29.761 -76.141 -1.143 1.00 29.13 C
ATOM 10 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 11 C2' U B1237 30.955 -77.021 -1.449 1.00 30.28 C
ATOM 12 O2' U B1237 31.325 -77.024 -2.806 1.00 34.76 O
ATOM 13 C1' U B1237 32.041 -76.411 -0.560 1.00 35.50 C
ATOM 14 N1 U B1237 33.083 -77.364 -0.178 1.00 31.75 N
ATOM 15 C2 U B1237 34.384 -77.179 -0.612 1.00 33.34 C
ATOM 16 O2 U B1237 34.753 -76.229 -1.281 1.00 31.25 O
ATOM 17 N3 U B1237 35.260 -78.159 -0.240 1.00 31.53 N
ATOM 18 C4 U B1237 34.979 -79.272 0.497 1.00 36.70 C
ATOM 19 O4 U B1237 35.886 -80.062 0.760 1.00 38.40 O
ATOM 20 C5 U B1237 33.607 -79.375 0.903 1.00 44.86 C
ATOM 21 C6 U B1237 32.713 -78.446 0.560 1.00 36.91 C
ATOM 22 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 23 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 24 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 25 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
TER
Atoms:
OP1: (39.344,-66.073,-2.859)
OP2: (37.658,-67.052,-4.475)
C3': (38.184,-69.928,-3.593)
C1': (36.212,-71.195,-4.092)
C5': (36.539,-68.467,-2.346)
O6: (30.475,-70.980,-5.550)
O4': (36.168,-70.769,-2.737)
C8: (34.531,-69.779,-5.269)
C2: (32.494,-73.379,-3.859)
C6: (31.473,-71.488,-5.056)
C5: (32.782,-70.955,-5.057)
C4: (33.789,-71.681,-4.461)
P: (37.962,-66.489,-3.142)
C4': (37.190,-69.801,-2.469)
C2': (37.317,-70.407,-4.775)
O2': (37.990,-71.193,-5.760)
N1: (31.410,-72.732,-4.426)
N2: (32.257,-74.575,-3.294)
N3: (33.726,-72.884,-3.840)
N7: (33.265,-69.764,-5.571)
N9: (34.904,-70.919,-4.638)
O5': (37.467,-67.469,-2.027)
O3': (39.165,-70.909,-3.247)
OP2: (37.658,-67.052,-4.475)
C3': (38.184,-69.928,-3.593)
C1': (36.212,-71.195,-4.092)
C5': (36.539,-68.467,-2.346)
O6: (30.475,-70.980,-5.550)
O4': (36.168,-70.769,-2.737)
C8: (34.531,-69.779,-5.269)
C2: (32.494,-73.379,-3.859)
C6: (31.473,-71.488,-5.056)
C5: (32.782,-70.955,-5.057)
C4: (33.789,-71.681,-4.461)
P: (37.962,-66.489,-3.142)
C4': (37.190,-69.801,-2.469)
C2': (37.317,-70.407,-4.775)
O2': (37.990,-71.193,-5.760)
N1: (31.410,-72.732,-4.426)
N2: (32.257,-74.575,-3.294)
N3: (33.726,-72.884,-3.840)
N7: (33.265,-69.764,-5.571)
N9: (34.904,-70.919,-4.638)
O5': (37.467,-67.469,-2.027)
O3': (39.165,-70.909,-3.247)
C4: (34.979,-79.272,0.497)
N3: (35.260,-78.159,-0.240)
OP1: (27.238,-78.578,2.354)
OP2: (29.032,-80.314,1.829)
C2: (34.384,-77.179,-0.612)
C1': (32.041,-76.411,-0.560)
C3': (29.761,-76.141,-1.143)
O5': (29.290,-77.924,1.107)
O4': (31.384,-75.992,0.607)
C5': (29.143,-76.528,1.288)
P: (28.661,-78.916,2.157)
C4': (29.978,-75.756,0.313)
C2': (30.955,-77.021,-1.449)
O2': (31.325,-77.024,-2.806)
N1: (33.083,-77.364,-0.178)
O4: (35.886,-80.062,0.760)
O2: (34.753,-76.229,-1.281)
C6: (32.713,-78.446,0.560)
C5: (33.607,-79.375,0.903)
O3': (29.788,-74.978,-1.966)
N3: (35.260,-78.159,-0.240)
OP1: (27.238,-78.578,2.354)
OP2: (29.032,-80.314,1.829)
C2: (34.384,-77.179,-0.612)
C1': (32.041,-76.411,-0.560)
C3': (29.761,-76.141,-1.143)
O5': (29.290,-77.924,1.107)
O4': (31.384,-75.992,0.607)
C5': (29.143,-76.528,1.288)
P: (28.661,-78.916,2.157)
C4': (29.978,-75.756,0.313)
C2': (30.955,-77.021,-1.449)
O2': (31.325,-77.024,-2.806)
N1: (33.083,-77.364,-0.178)
O4: (35.886,-80.062,0.760)
O2: (34.753,-76.229,-1.281)
C6: (32.713,-78.446,0.560)
C5: (33.607,-79.375,0.903)
O3': (29.788,-74.978,-1.966)
Image (generated by PyMOL):