Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1724:A1743
Extra
PDB:
ATOM 1 O3' U A1723 63.890 -6.438 -38.972 1.00 35.37 O
ATOM 2 P G A1724 63.376 -5.060 -39.637 1.00 44.25 P
ATOM 3 OP1 G A1724 64.225 -4.789 -40.828 1.00 37.93 O
ATOM 4 OP2 G A1724 63.286 -4.026 -38.561 1.00 39.66 O
ATOM 5 O5' G A1724 61.929 -5.456 -40.098 1.00 51.18 O
ATOM 6 C5' G A1724 60.798 -4.800 -39.550 1.00 38.90 C
ATOM 7 C4' G A1724 60.195 -3.894 -40.565 1.00 37.08 C
ATOM 8 O4' G A1724 59.228 -3.075 -39.906 1.00 39.34 O
ATOM 9 C3' G A1724 61.201 -2.983 -41.221 1.00 41.85 C
ATOM 10 O3' G A1724 61.307 -3.199 -42.673 1.00 49.94 O
ATOM 11 C2' G A1724 60.816 -1.555 -40.796 1.00 32.64 C
ATOM 12 O2' G A1724 60.786 -0.603 -41.831 1.00 41.35 O
ATOM 13 C1' G A1724 59.450 -1.715 -40.135 1.00 38.11 C
ATOM 14 N9 G A1724 59.349 -1.038 -38.839 1.00 38.44 N
ATOM 15 C8 G A1724 60.361 -0.310 -38.313 1.00 29.98 C
ATOM 16 N7 G A1724 60.030 0.206 -37.172 1.00 38.72 N
ATOM 17 C5 G A1724 58.727 -0.193 -36.901 1.00 34.50 C
ATOM 18 C6 G A1724 57.857 0.095 -35.787 1.00 38.93 C
ATOM 19 O6 G A1724 58.007 0.760 -34.746 1.00 40.42 O
ATOM 20 N1 G A1724 56.625 -0.504 -35.927 1.00 37.53 N
ATOM 21 C2 G A1724 56.256 -1.272 -36.993 1.00 40.94 C
ATOM 22 N2 G A1724 54.999 -1.734 -36.860 1.00 39.58 N
ATOM 23 N3 G A1724 57.044 -1.548 -38.046 1.00 31.07 N
ATOM 24 C4 G A1724 58.278 -0.982 -37.938 1.00 33.74 C
ATOM 25 P C A1725 60.074 -3.121 -43.721 1.00 39.04 P
ATOM 26 OP1 C A1725 60.613 -3.470 -45.042 1.00 25.44 O
ATOM 27 OP2 C A1725 59.448 -1.796 -43.548 1.00 46.96 O
ATOM 28 O5' C A1725 59.064 -4.260 -43.264 1.00 37.62 O
TER
ATOM 1 O3' G B1742 48.588 -6.632 -32.386 1.00 25.51 O
ATOM 2 P U B1743 48.600 -5.062 -32.659 1.00 46.05 P
ATOM 3 OP1 U B1743 48.609 -4.399 -31.325 1.00 38.10 O
ATOM 4 OP2 U B1743 47.490 -4.752 -33.601 1.00 48.76 O
ATOM 5 O5' U B1743 49.990 -4.854 -33.391 1.00 33.72 O
ATOM 6 C5' U B1743 51.193 -5.179 -32.725 1.00 37.71 C
ATOM 7 C4' U B1743 52.381 -4.625 -33.430 1.00 32.06 C
ATOM 8 O4' U B1743 52.552 -5.314 -34.692 1.00 38.69 O
ATOM 9 C3' U B1743 52.318 -3.141 -33.752 1.00 35.48 C
ATOM 10 O3' U B1743 53.605 -2.591 -33.550 1.00 42.93 O
ATOM 11 C2' U B1743 51.997 -3.129 -35.246 1.00 37.29 C
ATOM 12 O2' U B1743 52.436 -1.974 -35.929 1.00 41.66 O
ATOM 13 C1' U B1743 52.732 -4.372 -35.719 1.00 39.17 C
ATOM 14 N1 U B1743 52.203 -4.948 -36.965 1.00 43.44 N
ATOM 15 C2 U B1743 52.941 -4.892 -38.146 1.00 44.47 C
ATOM 16 O2 U B1743 54.048 -4.385 -38.248 1.00 43.17 O
ATOM 17 N3 U B1743 52.326 -5.451 -39.238 1.00 41.28 N
ATOM 18 C4 U B1743 51.088 -6.059 -39.263 1.00 43.31 C
ATOM 19 O4 U B1743 50.650 -6.526 -40.317 1.00 48.91 O
ATOM 20 C5 U B1743 50.414 -6.078 -38.007 1.00 43.29 C
ATOM 21 C6 U B1743 50.976 -5.534 -36.930 1.00 40.07 C
ATOM 22 P A B1744 53.794 -1.029 -33.302 1.00 36.57 P
ATOM 23 OP1 A B1744 52.546 -0.505 -32.730 1.00 33.10 O
ATOM 24 OP2 A B1744 54.295 -0.455 -34.572 1.00 39.97 O
ATOM 25 O5' A B1744 54.932 -0.998 -32.220 1.00 37.69 O
TER
ATOM 2 P G A1724 63.376 -5.060 -39.637 1.00 44.25 P
ATOM 3 OP1 G A1724 64.225 -4.789 -40.828 1.00 37.93 O
ATOM 4 OP2 G A1724 63.286 -4.026 -38.561 1.00 39.66 O
ATOM 5 O5' G A1724 61.929 -5.456 -40.098 1.00 51.18 O
ATOM 6 C5' G A1724 60.798 -4.800 -39.550 1.00 38.90 C
ATOM 7 C4' G A1724 60.195 -3.894 -40.565 1.00 37.08 C
ATOM 8 O4' G A1724 59.228 -3.075 -39.906 1.00 39.34 O
ATOM 9 C3' G A1724 61.201 -2.983 -41.221 1.00 41.85 C
ATOM 10 O3' G A1724 61.307 -3.199 -42.673 1.00 49.94 O
ATOM 11 C2' G A1724 60.816 -1.555 -40.796 1.00 32.64 C
ATOM 12 O2' G A1724 60.786 -0.603 -41.831 1.00 41.35 O
ATOM 13 C1' G A1724 59.450 -1.715 -40.135 1.00 38.11 C
ATOM 14 N9 G A1724 59.349 -1.038 -38.839 1.00 38.44 N
ATOM 15 C8 G A1724 60.361 -0.310 -38.313 1.00 29.98 C
ATOM 16 N7 G A1724 60.030 0.206 -37.172 1.00 38.72 N
ATOM 17 C5 G A1724 58.727 -0.193 -36.901 1.00 34.50 C
ATOM 18 C6 G A1724 57.857 0.095 -35.787 1.00 38.93 C
ATOM 19 O6 G A1724 58.007 0.760 -34.746 1.00 40.42 O
ATOM 20 N1 G A1724 56.625 -0.504 -35.927 1.00 37.53 N
ATOM 21 C2 G A1724 56.256 -1.272 -36.993 1.00 40.94 C
ATOM 22 N2 G A1724 54.999 -1.734 -36.860 1.00 39.58 N
ATOM 23 N3 G A1724 57.044 -1.548 -38.046 1.00 31.07 N
ATOM 24 C4 G A1724 58.278 -0.982 -37.938 1.00 33.74 C
ATOM 25 P C A1725 60.074 -3.121 -43.721 1.00 39.04 P
ATOM 26 OP1 C A1725 60.613 -3.470 -45.042 1.00 25.44 O
ATOM 27 OP2 C A1725 59.448 -1.796 -43.548 1.00 46.96 O
ATOM 28 O5' C A1725 59.064 -4.260 -43.264 1.00 37.62 O
TER
ATOM 1 O3' G B1742 48.588 -6.632 -32.386 1.00 25.51 O
ATOM 2 P U B1743 48.600 -5.062 -32.659 1.00 46.05 P
ATOM 3 OP1 U B1743 48.609 -4.399 -31.325 1.00 38.10 O
ATOM 4 OP2 U B1743 47.490 -4.752 -33.601 1.00 48.76 O
ATOM 5 O5' U B1743 49.990 -4.854 -33.391 1.00 33.72 O
ATOM 6 C5' U B1743 51.193 -5.179 -32.725 1.00 37.71 C
ATOM 7 C4' U B1743 52.381 -4.625 -33.430 1.00 32.06 C
ATOM 8 O4' U B1743 52.552 -5.314 -34.692 1.00 38.69 O
ATOM 9 C3' U B1743 52.318 -3.141 -33.752 1.00 35.48 C
ATOM 10 O3' U B1743 53.605 -2.591 -33.550 1.00 42.93 O
ATOM 11 C2' U B1743 51.997 -3.129 -35.246 1.00 37.29 C
ATOM 12 O2' U B1743 52.436 -1.974 -35.929 1.00 41.66 O
ATOM 13 C1' U B1743 52.732 -4.372 -35.719 1.00 39.17 C
ATOM 14 N1 U B1743 52.203 -4.948 -36.965 1.00 43.44 N
ATOM 15 C2 U B1743 52.941 -4.892 -38.146 1.00 44.47 C
ATOM 16 O2 U B1743 54.048 -4.385 -38.248 1.00 43.17 O
ATOM 17 N3 U B1743 52.326 -5.451 -39.238 1.00 41.28 N
ATOM 18 C4 U B1743 51.088 -6.059 -39.263 1.00 43.31 C
ATOM 19 O4 U B1743 50.650 -6.526 -40.317 1.00 48.91 O
ATOM 20 C5 U B1743 50.414 -6.078 -38.007 1.00 43.29 C
ATOM 21 C6 U B1743 50.976 -5.534 -36.930 1.00 40.07 C
ATOM 22 P A B1744 53.794 -1.029 -33.302 1.00 36.57 P
ATOM 23 OP1 A B1744 52.546 -0.505 -32.730 1.00 33.10 O
ATOM 24 OP2 A B1744 54.295 -0.455 -34.572 1.00 39.97 O
ATOM 25 O5' A B1744 54.932 -0.998 -32.220 1.00 37.69 O
TER
Atoms:
OP1: (64.225,-4.789,-40.828)
OP2: (63.286,-4.026,-38.561)
C3': (61.201,-2.983,-41.221)
C1': (59.450,-1.715,-40.135)
C5': (60.798,-4.800,-39.550)
O6: (58.007,0.760,-34.746)
O4': (59.228,-3.075,-39.906)
C8: (60.361,-0.310,-38.313)
C2: (56.256,-1.272,-36.993)
C6: (57.857,0.095,-35.787)
C5: (58.727,-0.193,-36.901)
C4: (58.278,-0.982,-37.938)
P: (63.376,-5.060,-39.637)
C4': (60.195,-3.894,-40.565)
C2': (60.816,-1.555,-40.796)
O2': (60.786,-0.603,-41.831)
N1: (56.625,-0.504,-35.927)
N2: (54.999,-1.734,-36.860)
N3: (57.044,-1.548,-38.046)
N7: (60.030,0.206,-37.172)
N9: (59.349,-1.038,-38.839)
O5': (61.929,-5.456,-40.098)
O3': (61.307,-3.199,-42.673)
OP2: (63.286,-4.026,-38.561)
C3': (61.201,-2.983,-41.221)
C1': (59.450,-1.715,-40.135)
C5': (60.798,-4.800,-39.550)
O6: (58.007,0.760,-34.746)
O4': (59.228,-3.075,-39.906)
C8: (60.361,-0.310,-38.313)
C2: (56.256,-1.272,-36.993)
C6: (57.857,0.095,-35.787)
C5: (58.727,-0.193,-36.901)
C4: (58.278,-0.982,-37.938)
P: (63.376,-5.060,-39.637)
C4': (60.195,-3.894,-40.565)
C2': (60.816,-1.555,-40.796)
O2': (60.786,-0.603,-41.831)
N1: (56.625,-0.504,-35.927)
N2: (54.999,-1.734,-36.860)
N3: (57.044,-1.548,-38.046)
N7: (60.030,0.206,-37.172)
N9: (59.349,-1.038,-38.839)
O5': (61.929,-5.456,-40.098)
O3': (61.307,-3.199,-42.673)
C4: (51.088,-6.059,-39.263)
N3: (52.326,-5.451,-39.238)
OP1: (48.609,-4.399,-31.325)
OP2: (47.490,-4.752,-33.601)
C2: (52.941,-4.892,-38.146)
C1': (52.732,-4.372,-35.719)
C3': (52.318,-3.141,-33.752)
O5': (49.990,-4.854,-33.391)
O4': (52.552,-5.314,-34.692)
C5': (51.193,-5.179,-32.725)
P: (48.600,-5.062,-32.659)
C4': (52.381,-4.625,-33.430)
C2': (51.997,-3.129,-35.246)
O2': (52.436,-1.974,-35.929)
N1: (52.203,-4.948,-36.965)
O4: (50.650,-6.526,-40.317)
O2: (54.048,-4.385,-38.248)
C6: (50.976,-5.534,-36.930)
C5: (50.414,-6.078,-38.007)
O3': (53.605,-2.591,-33.550)
N3: (52.326,-5.451,-39.238)
OP1: (48.609,-4.399,-31.325)
OP2: (47.490,-4.752,-33.601)
C2: (52.941,-4.892,-38.146)
C1': (52.732,-4.372,-35.719)
C3': (52.318,-3.141,-33.752)
O5': (49.990,-4.854,-33.391)
O4': (52.552,-5.314,-34.692)
C5': (51.193,-5.179,-32.725)
P: (48.600,-5.062,-32.659)
C4': (52.381,-4.625,-33.430)
C2': (51.997,-3.129,-35.246)
O2': (52.436,-1.974,-35.929)
N1: (52.203,-4.948,-36.965)
O4: (50.650,-6.526,-40.317)
O2: (54.048,-4.385,-38.248)
C6: (50.976,-5.534,-36.930)
C5: (50.414,-6.078,-38.007)
O3': (53.605,-2.591,-33.550)
Image (generated by PyMOL):