Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1588:A1237
Extra
PDB:
ATOM 1 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 2 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 3 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 4 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 5 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
ATOM 6 C5' G A1588 36.826 -68.396 -2.123 1.00 22.63 C
ATOM 7 C4' G A1588 37.454 -69.737 -2.308 1.00 25.05 C
ATOM 8 O4' G A1588 36.409 -70.685 -2.620 1.00 36.88 O
ATOM 9 C3' G A1588 38.448 -69.824 -3.445 1.00 27.63 C
ATOM 10 O3' G A1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 11 C2' G A1588 37.564 -70.235 -4.649 1.00 27.19 C
ATOM 12 O2' G A1588 38.203 -71.001 -5.654 1.00 27.47 O
ATOM 13 C1' G A1588 36.432 -71.022 -4.005 1.00 33.02 C
ATOM 14 N9 G A1588 35.119 -70.679 -4.538 1.00 30.11 N
ATOM 15 C8 G A1588 34.725 -69.523 -5.134 1.00 23.96 C
ATOM 16 N7 G A1588 33.464 -69.519 -5.440 1.00 26.61 N
ATOM 17 C5 G A1588 32.988 -70.739 -4.973 1.00 33.22 C
ATOM 18 C6 G A1588 31.681 -71.322 -4.973 1.00 35.01 C
ATOM 19 O6 G A1588 30.619 -70.856 -5.429 1.00 40.74 O
ATOM 20 N1 G A1588 31.680 -72.590 -4.382 1.00 30.83 N
ATOM 21 C2 G A1588 32.786 -73.211 -3.860 1.00 34.41 C
ATOM 22 N2 G A1588 32.626 -74.426 -3.334 1.00 36.65 N
ATOM 23 N3 G A1588 33.986 -72.675 -3.837 1.00 39.71 N
ATOM 24 C4 G A1588 34.009 -71.456 -4.406 1.00 36.51 C
ATOM 25 P C A1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 26 OP1 C A1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 27 OP2 C A1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 28 O5' C A1589 40.979 -70.968 -1.192 1.00 23.33 O
TER
ATOM 1 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 2 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U B1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U B1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U B1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U B1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U B1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U B1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U B1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U B1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U B1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U B1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U B1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U B1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U B1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U B1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U B1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
ATOM 2 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 3 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 4 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 5 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
ATOM 6 C5' G A1588 36.826 -68.396 -2.123 1.00 22.63 C
ATOM 7 C4' G A1588 37.454 -69.737 -2.308 1.00 25.05 C
ATOM 8 O4' G A1588 36.409 -70.685 -2.620 1.00 36.88 O
ATOM 9 C3' G A1588 38.448 -69.824 -3.445 1.00 27.63 C
ATOM 10 O3' G A1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 11 C2' G A1588 37.564 -70.235 -4.649 1.00 27.19 C
ATOM 12 O2' G A1588 38.203 -71.001 -5.654 1.00 27.47 O
ATOM 13 C1' G A1588 36.432 -71.022 -4.005 1.00 33.02 C
ATOM 14 N9 G A1588 35.119 -70.679 -4.538 1.00 30.11 N
ATOM 15 C8 G A1588 34.725 -69.523 -5.134 1.00 23.96 C
ATOM 16 N7 G A1588 33.464 -69.519 -5.440 1.00 26.61 N
ATOM 17 C5 G A1588 32.988 -70.739 -4.973 1.00 33.22 C
ATOM 18 C6 G A1588 31.681 -71.322 -4.973 1.00 35.01 C
ATOM 19 O6 G A1588 30.619 -70.856 -5.429 1.00 40.74 O
ATOM 20 N1 G A1588 31.680 -72.590 -4.382 1.00 30.83 N
ATOM 21 C2 G A1588 32.786 -73.211 -3.860 1.00 34.41 C
ATOM 22 N2 G A1588 32.626 -74.426 -3.334 1.00 36.65 N
ATOM 23 N3 G A1588 33.986 -72.675 -3.837 1.00 39.71 N
ATOM 24 C4 G A1588 34.009 -71.456 -4.406 1.00 36.51 C
ATOM 25 P C A1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 26 OP1 C A1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 27 OP2 C A1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 28 O5' C A1589 40.979 -70.968 -1.192 1.00 23.33 O
TER
ATOM 1 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 2 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U B1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U B1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U B1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U B1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U B1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U B1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U B1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U B1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U B1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U B1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U B1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U B1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U B1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U B1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U B1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
Atoms:
OP1: (39.504,-65.894,-2.927)
OP2: (37.787,-67.030,-4.399)
C3': (38.448,-69.824,-3.445)
C1': (36.432,-71.022,-4.005)
C5': (36.826,-68.396,-2.123)
O6: (30.619,-70.856,-5.429)
O4': (36.409,-70.685,-2.620)
C8: (34.725,-69.523,-5.134)
C2: (32.786,-73.211,-3.860)
C6: (31.681,-71.322,-4.973)
C5: (32.988,-70.739,-4.973)
C4: (34.009,-71.456,-4.406)
P: (38.137,-66.419,-3.103)
C4': (37.454,-69.737,-2.308)
C2': (37.564,-70.235,-4.649)
O2': (38.203,-71.001,-5.654)
N1: (31.680,-72.590,-4.382)
N2: (32.626,-74.426,-3.334)
N3: (33.986,-72.675,-3.837)
N7: (33.464,-69.519,-5.440)
N9: (35.119,-70.679,-4.538)
O5': (37.792,-67.406,-1.939)
O3': (39.430,-70.832,-3.152)
OP2: (37.787,-67.030,-4.399)
C3': (38.448,-69.824,-3.445)
C1': (36.432,-71.022,-4.005)
C5': (36.826,-68.396,-2.123)
O6: (30.619,-70.856,-5.429)
O4': (36.409,-70.685,-2.620)
C8: (34.725,-69.523,-5.134)
C2: (32.786,-73.211,-3.860)
C6: (31.681,-71.322,-4.973)
C5: (32.988,-70.739,-4.973)
C4: (34.009,-71.456,-4.406)
P: (38.137,-66.419,-3.103)
C4': (37.454,-69.737,-2.308)
C2': (37.564,-70.235,-4.649)
O2': (38.203,-71.001,-5.654)
N1: (31.680,-72.590,-4.382)
N2: (32.626,-74.426,-3.334)
N3: (33.986,-72.675,-3.837)
N7: (33.464,-69.519,-5.440)
N9: (35.119,-70.679,-4.538)
O5': (37.792,-67.406,-1.939)
O3': (39.430,-70.832,-3.152)
C4: (35.066,-79.188,0.467)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
Image (generated by PyMOL):