Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1868:A1858
Extra
PDB:
ATOM 1 O3' C A1867 -114.480 -27.279 81.429 1.00 63.80 O
ATOM 2 P G A1868 -113.139 -27.196 80.558 1.00 45.64 P
ATOM 3 OP1 G A1868 -113.228 -25.973 79.705 1.00 45.64 O
ATOM 4 OP2 G A1868 -112.981 -28.527 79.887 1.00 45.64 O
ATOM 5 O5' G A1868 -112.008 -27.007 81.677 1.00 45.64 O
ATOM 6 C5' G A1868 -112.200 -26.139 82.784 1.00 45.64 C
ATOM 7 C4' G A1868 -111.121 -26.325 83.823 1.00 45.64 C
ATOM 8 O4' G A1868 -111.494 -27.395 84.737 1.00 45.64 O
ATOM 9 C3' G A1868 -109.754 -26.748 83.297 1.00 45.64 C
ATOM 10 O3' G A1868 -108.998 -25.659 82.760 1.00 45.64 O
ATOM 11 C2' G A1868 -109.139 -27.433 84.515 1.00 45.64 C
ATOM 12 O2' G A1868 -108.730 -26.479 85.490 1.00 45.64 O
ATOM 13 C1' G A1868 -110.356 -28.172 85.065 1.00 45.64 C
ATOM 14 N9 G A1868 -110.528 -29.519 84.471 1.00 44.86 N
ATOM 15 C8 G A1868 -111.318 -29.785 83.381 1.00 44.86 C
ATOM 16 N7 G A1868 -111.359 -31.042 83.042 1.00 44.86 N
ATOM 17 C5 G A1868 -110.560 -31.668 83.975 1.00 44.86 C
ATOM 18 C6 G A1868 -110.242 -33.045 84.101 1.00 44.86 C
ATOM 19 O6 G A1868 -110.608 -33.989 83.400 1.00 44.86 O
ATOM 20 N1 G A1868 -109.403 -33.279 85.178 1.00 44.86 N
ATOM 21 C2 G A1868 -108.935 -32.302 86.023 1.00 44.86 C
ATOM 22 N2 G A1868 -108.131 -32.736 87.003 1.00 44.86 N
ATOM 23 N3 G A1868 -109.229 -31.009 85.916 1.00 44.86 N
ATOM 24 C4 G A1868 -110.044 -30.751 84.873 1.00 44.86 C
ATOM 25 P A A1869 -107.529 -25.277 83.326 1.00 31.87 P
ATOM 26 OP1 A A1869 -106.899 -24.370 82.328 1.00 31.87 O
ATOM 27 OP2 A A1869 -106.846 -26.559 83.659 1.00 31.87 O
ATOM 28 O5' A A1869 -107.846 -24.452 84.662 1.00 31.87 O
TER
ATOM 1 O3' U B1857 -103.116 -37.939 83.409 1.00 7.60 O
ATOM 2 P U B1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U B1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U B1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U B1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U B1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U B1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U B1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U B1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U B1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U B1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U B1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U B1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U B1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U B1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U B1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U B1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U B1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U B1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U B1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
ATOM 2 P G A1868 -113.139 -27.196 80.558 1.00 45.64 P
ATOM 3 OP1 G A1868 -113.228 -25.973 79.705 1.00 45.64 O
ATOM 4 OP2 G A1868 -112.981 -28.527 79.887 1.00 45.64 O
ATOM 5 O5' G A1868 -112.008 -27.007 81.677 1.00 45.64 O
ATOM 6 C5' G A1868 -112.200 -26.139 82.784 1.00 45.64 C
ATOM 7 C4' G A1868 -111.121 -26.325 83.823 1.00 45.64 C
ATOM 8 O4' G A1868 -111.494 -27.395 84.737 1.00 45.64 O
ATOM 9 C3' G A1868 -109.754 -26.748 83.297 1.00 45.64 C
ATOM 10 O3' G A1868 -108.998 -25.659 82.760 1.00 45.64 O
ATOM 11 C2' G A1868 -109.139 -27.433 84.515 1.00 45.64 C
ATOM 12 O2' G A1868 -108.730 -26.479 85.490 1.00 45.64 O
ATOM 13 C1' G A1868 -110.356 -28.172 85.065 1.00 45.64 C
ATOM 14 N9 G A1868 -110.528 -29.519 84.471 1.00 44.86 N
ATOM 15 C8 G A1868 -111.318 -29.785 83.381 1.00 44.86 C
ATOM 16 N7 G A1868 -111.359 -31.042 83.042 1.00 44.86 N
ATOM 17 C5 G A1868 -110.560 -31.668 83.975 1.00 44.86 C
ATOM 18 C6 G A1868 -110.242 -33.045 84.101 1.00 44.86 C
ATOM 19 O6 G A1868 -110.608 -33.989 83.400 1.00 44.86 O
ATOM 20 N1 G A1868 -109.403 -33.279 85.178 1.00 44.86 N
ATOM 21 C2 G A1868 -108.935 -32.302 86.023 1.00 44.86 C
ATOM 22 N2 G A1868 -108.131 -32.736 87.003 1.00 44.86 N
ATOM 23 N3 G A1868 -109.229 -31.009 85.916 1.00 44.86 N
ATOM 24 C4 G A1868 -110.044 -30.751 84.873 1.00 44.86 C
ATOM 25 P A A1869 -107.529 -25.277 83.326 1.00 31.87 P
ATOM 26 OP1 A A1869 -106.899 -24.370 82.328 1.00 31.87 O
ATOM 27 OP2 A A1869 -106.846 -26.559 83.659 1.00 31.87 O
ATOM 28 O5' A A1869 -107.846 -24.452 84.662 1.00 31.87 O
TER
ATOM 1 O3' U B1857 -103.116 -37.939 83.409 1.00 7.60 O
ATOM 2 P U B1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U B1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U B1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U B1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U B1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U B1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U B1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U B1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U B1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U B1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U B1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U B1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U B1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U B1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U B1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U B1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U B1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U B1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U B1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
Atoms:
OP1: (-113.228,-25.973,79.705)
OP2: (-112.981,-28.527,79.887)
C3': (-109.754,-26.748,83.297)
C1': (-110.356,-28.172,85.065)
C5': (-112.200,-26.139,82.784)
O6: (-110.608,-33.989,83.400)
O4': (-111.494,-27.395,84.737)
C8: (-111.318,-29.785,83.381)
C2: (-108.935,-32.302,86.023)
C6: (-110.242,-33.045,84.101)
C5: (-110.560,-31.668,83.975)
C4: (-110.044,-30.751,84.873)
P: (-113.139,-27.196,80.558)
C4': (-111.121,-26.325,83.823)
C2': (-109.139,-27.433,84.515)
O2': (-108.730,-26.479,85.490)
N1: (-109.403,-33.279,85.178)
N2: (-108.131,-32.736,87.003)
N3: (-109.229,-31.009,85.916)
N7: (-111.359,-31.042,83.042)
N9: (-110.528,-29.519,84.471)
O5': (-112.008,-27.007,81.677)
O3': (-108.998,-25.659,82.760)
OP2: (-112.981,-28.527,79.887)
C3': (-109.754,-26.748,83.297)
C1': (-110.356,-28.172,85.065)
C5': (-112.200,-26.139,82.784)
O6: (-110.608,-33.989,83.400)
O4': (-111.494,-27.395,84.737)
C8: (-111.318,-29.785,83.381)
C2: (-108.935,-32.302,86.023)
C6: (-110.242,-33.045,84.101)
C5: (-110.560,-31.668,83.975)
C4: (-110.044,-30.751,84.873)
P: (-113.139,-27.196,80.558)
C4': (-111.121,-26.325,83.823)
C2': (-109.139,-27.433,84.515)
O2': (-108.730,-26.479,85.490)
N1: (-109.403,-33.279,85.178)
N2: (-108.131,-32.736,87.003)
N3: (-109.229,-31.009,85.916)
N7: (-111.359,-31.042,83.042)
N9: (-110.528,-29.519,84.471)
O5': (-112.008,-27.007,81.677)
O3': (-108.998,-25.659,82.760)
C4: (-106.325,-32.262,83.315)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
Image (generated by PyMOL):