Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12344:12266
Extra
PDB:
ATOM 1 O3' A A2343 2.320 -28.298 132.503 1.00 79.78 O
ATOM 2 P G A2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 3 OP1 G A2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 4 OP2 G A2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 5 O5' G A2344 3.083 -30.604 133.050 1.00 68.31 O
ATOM 6 C5' G A2344 4.113 -30.517 132.082 1.00 67.80 C
ATOM 7 C4' G A2344 5.343 -31.208 132.584 1.00 67.93 C
ATOM 8 O4' G A2344 5.902 -30.446 133.670 1.00 68.21 O
ATOM 9 C3' G A2344 5.114 -32.576 133.186 1.00 68.34 C
ATOM 10 O3' G A2344 5.013 -33.580 132.200 1.00 68.08 O
ATOM 11 C2' G A2344 6.307 -32.740 134.127 1.00 68.60 C
ATOM 12 O2' G A2344 7.451 -33.179 133.418 1.00 68.25 O
ATOM 13 C1' G A2344 6.553 -31.302 134.572 1.00 68.59 C
ATOM 14 N9 G A2344 6.054 -31.021 135.916 1.00 69.16 N
ATOM 15 C8 G A2344 4.861 -30.486 136.272 1.00 69.39 C
ATOM 16 N7 G A2344 4.729 -30.314 137.554 1.00 69.92 N
ATOM 17 C5 G A2344 5.926 -30.737 138.066 1.00 70.05 C
ATOM 18 C6 G A2344 6.409 -30.784 139.404 1.00 70.57 C
ATOM 19 O6 G A2344 5.870 -30.463 140.476 1.00 71.07 O
ATOM 20 N1 G A2344 7.705 -31.275 139.437 1.00 70.51 N
ATOM 21 C2 G A2344 8.435 -31.667 138.360 1.00 70.02 C
ATOM 22 N2 G A2344 9.664 -32.102 138.639 1.00 70.07 N
ATOM 23 N3 G A2344 7.995 -31.629 137.121 1.00 69.53 N
ATOM 24 C4 G A2344 6.750 -31.158 137.055 1.00 69.58 C
ATOM 25 P A A2345 4.422 -35.026 132.552 1.00 62.78 P
ATOM 26 OP1 A A2345 3.768 -35.538 131.322 1.00 62.45 O
ATOM 27 OP2 A A2345 3.617 -34.894 133.795 1.00 63.34 O
ATOM 28 O5' A A2345 5.729 -35.861 132.857 1.00 62.86 O
TER
ATOM 1 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 2 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 3 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 4 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 5 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
ATOM 6 C5' U B2266 12.305 -31.457 145.243 1.00 59.05 C
ATOM 7 C4' U B2266 13.377 -31.782 144.245 1.00 58.54 C
ATOM 8 O4' U B2266 13.417 -33.221 144.060 1.00 58.61 O
ATOM 9 C3' U B2266 13.149 -31.180 142.860 1.00 57.85 C
ATOM 10 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 11 C2' U B2266 12.405 -32.312 142.163 1.00 57.70 C
ATOM 12 O2' U B2266 12.397 -32.262 140.753 1.00 57.06 O
ATOM 13 C1' U B2266 13.141 -33.530 142.714 1.00 58.04 C
ATOM 14 N1 U B2266 12.358 -34.748 142.683 1.00 58.23 N
ATOM 15 C2 U B2266 12.663 -35.582 141.670 1.00 57.86 C
ATOM 16 O2 U B2266 13.538 -35.311 140.901 1.00 57.42 O
ATOM 17 N3 U B2266 11.948 -36.717 141.569 1.00 58.02 N
ATOM 18 C4 U B2266 10.955 -37.094 142.425 1.00 58.53 C
ATOM 19 O4 U B2266 10.375 -38.181 142.239 1.00 58.65 O
ATOM 20 C5 U B2266 10.699 -36.147 143.483 1.00 58.90 C
ATOM 21 C6 U B2266 11.395 -35.017 143.581 1.00 58.75 C
ATOM 22 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 23 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 24 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 25 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
TER
ATOM 2 P G A2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 3 OP1 G A2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 4 OP2 G A2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 5 O5' G A2344 3.083 -30.604 133.050 1.00 68.31 O
ATOM 6 C5' G A2344 4.113 -30.517 132.082 1.00 67.80 C
ATOM 7 C4' G A2344 5.343 -31.208 132.584 1.00 67.93 C
ATOM 8 O4' G A2344 5.902 -30.446 133.670 1.00 68.21 O
ATOM 9 C3' G A2344 5.114 -32.576 133.186 1.00 68.34 C
ATOM 10 O3' G A2344 5.013 -33.580 132.200 1.00 68.08 O
ATOM 11 C2' G A2344 6.307 -32.740 134.127 1.00 68.60 C
ATOM 12 O2' G A2344 7.451 -33.179 133.418 1.00 68.25 O
ATOM 13 C1' G A2344 6.553 -31.302 134.572 1.00 68.59 C
ATOM 14 N9 G A2344 6.054 -31.021 135.916 1.00 69.16 N
ATOM 15 C8 G A2344 4.861 -30.486 136.272 1.00 69.39 C
ATOM 16 N7 G A2344 4.729 -30.314 137.554 1.00 69.92 N
ATOM 17 C5 G A2344 5.926 -30.737 138.066 1.00 70.05 C
ATOM 18 C6 G A2344 6.409 -30.784 139.404 1.00 70.57 C
ATOM 19 O6 G A2344 5.870 -30.463 140.476 1.00 71.07 O
ATOM 20 N1 G A2344 7.705 -31.275 139.437 1.00 70.51 N
ATOM 21 C2 G A2344 8.435 -31.667 138.360 1.00 70.02 C
ATOM 22 N2 G A2344 9.664 -32.102 138.639 1.00 70.07 N
ATOM 23 N3 G A2344 7.995 -31.629 137.121 1.00 69.53 N
ATOM 24 C4 G A2344 6.750 -31.158 137.055 1.00 69.58 C
ATOM 25 P A A2345 4.422 -35.026 132.552 1.00 62.78 P
ATOM 26 OP1 A A2345 3.768 -35.538 131.322 1.00 62.45 O
ATOM 27 OP2 A A2345 3.617 -34.894 133.795 1.00 63.34 O
ATOM 28 O5' A A2345 5.729 -35.861 132.857 1.00 62.86 O
TER
ATOM 1 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 2 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 3 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 4 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 5 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
ATOM 6 C5' U B2266 12.305 -31.457 145.243 1.00 59.05 C
ATOM 7 C4' U B2266 13.377 -31.782 144.245 1.00 58.54 C
ATOM 8 O4' U B2266 13.417 -33.221 144.060 1.00 58.61 O
ATOM 9 C3' U B2266 13.149 -31.180 142.860 1.00 57.85 C
ATOM 10 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 11 C2' U B2266 12.405 -32.312 142.163 1.00 57.70 C
ATOM 12 O2' U B2266 12.397 -32.262 140.753 1.00 57.06 O
ATOM 13 C1' U B2266 13.141 -33.530 142.714 1.00 58.04 C
ATOM 14 N1 U B2266 12.358 -34.748 142.683 1.00 58.23 N
ATOM 15 C2 U B2266 12.663 -35.582 141.670 1.00 57.86 C
ATOM 16 O2 U B2266 13.538 -35.311 140.901 1.00 57.42 O
ATOM 17 N3 U B2266 11.948 -36.717 141.569 1.00 58.02 N
ATOM 18 C4 U B2266 10.955 -37.094 142.425 1.00 58.53 C
ATOM 19 O4 U B2266 10.375 -38.181 142.239 1.00 58.65 O
ATOM 20 C5 U B2266 10.699 -36.147 143.483 1.00 58.90 C
ATOM 21 C6 U B2266 11.395 -35.017 143.581 1.00 58.75 C
ATOM 22 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 23 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 24 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 25 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
TER
Atoms:
OP1: (0.889,-30.247,131.856)
OP2: (1.183,-29.562,134.320)
C3': (5.114,-32.576,133.186)
C1': (6.553,-31.302,134.572)
C5': (4.113,-30.517,132.082)
O6: (5.870,-30.463,140.476)
O4': (5.902,-30.446,133.670)
C8: (4.861,-30.486,136.272)
C2: (8.435,-31.667,138.360)
C6: (6.409,-30.784,139.404)
C5: (5.926,-30.737,138.066)
C4: (6.750,-31.158,137.055)
P: (1.764,-29.730,132.951)
C4': (5.343,-31.208,132.584)
C2': (6.307,-32.740,134.127)
O2': (7.451,-33.179,133.418)
N1: (7.705,-31.275,139.437)
N2: (9.664,-32.102,138.639)
N3: (7.995,-31.629,137.121)
N7: (4.729,-30.314,137.554)
N9: (6.054,-31.021,135.916)
O5': (3.083,-30.604,133.050)
O3': (5.013,-33.580,132.200)
OP2: (1.183,-29.562,134.320)
C3': (5.114,-32.576,133.186)
C1': (6.553,-31.302,134.572)
C5': (4.113,-30.517,132.082)
O6: (5.870,-30.463,140.476)
O4': (5.902,-30.446,133.670)
C8: (4.861,-30.486,136.272)
C2: (8.435,-31.667,138.360)
C6: (6.409,-30.784,139.404)
C5: (5.926,-30.737,138.066)
C4: (6.750,-31.158,137.055)
P: (1.764,-29.730,132.951)
C4': (5.343,-31.208,132.584)
C2': (6.307,-32.740,134.127)
O2': (7.451,-33.179,133.418)
N1: (7.705,-31.275,139.437)
N2: (9.664,-32.102,138.639)
N3: (7.995,-31.629,137.121)
N7: (4.729,-30.314,137.554)
N9: (6.054,-31.021,135.916)
O5': (3.083,-30.604,133.050)
O3': (5.013,-33.580,132.200)
C4: (10.955,-37.094,142.425)
N3: (11.948,-36.717,141.569)
OP1: (9.739,-33.238,145.208)
OP2: (9.574,-31.089,146.558)
C2: (12.663,-35.582,141.670)
C1': (13.141,-33.530,142.714)
C3': (13.149,-31.180,142.860)
O5': (11.051,-31.217,144.602)
O4': (13.417,-33.221,144.060)
C5': (12.305,-31.457,145.243)
P: (9.741,-31.752,145.260)
C4': (13.377,-31.782,144.245)
C2': (12.405,-32.312,142.163)
O2': (12.397,-32.262,140.753)
N1: (12.358,-34.748,142.683)
O4: (10.375,-38.181,142.239)
O2: (13.538,-35.311,140.901)
C6: (11.395,-35.017,143.581)
C5: (10.699,-36.147,143.483)
O3': (14.411,-30.944,142.226)
N3: (11.948,-36.717,141.569)
OP1: (9.739,-33.238,145.208)
OP2: (9.574,-31.089,146.558)
C2: (12.663,-35.582,141.670)
C1': (13.141,-33.530,142.714)
C3': (13.149,-31.180,142.860)
O5': (11.051,-31.217,144.602)
O4': (13.417,-33.221,144.060)
C5': (12.305,-31.457,145.243)
P: (9.741,-31.752,145.260)
C4': (13.377,-31.782,144.245)
C2': (12.405,-32.312,142.163)
O2': (12.397,-32.262,140.753)
N1: (12.358,-34.748,142.683)
O4: (10.375,-38.181,142.239)
O2: (13.538,-35.311,140.901)
C6: (11.395,-35.017,143.581)
C5: (10.699,-36.147,143.483)
O3': (14.411,-30.944,142.226)
Image (generated by PyMOL):