Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1554:11280
Extra
PDB:
ATOM 1 O3' G A 553 99.144 -20.116 27.918 1.00 46.78 O
ATOM 2 P G A 554 99.702 -18.924 28.834 1.00 43.10 P
ATOM 3 OP1 G A 554 100.805 -18.281 28.099 1.00 43.45 O
ATOM 4 OP2 G A 554 99.941 -19.454 30.183 1.00 42.96 O
ATOM 5 O5' G A 554 98.480 -17.938 28.869 1.00 42.72 O
ATOM 6 C5' G A 554 97.968 -17.396 27.660 1.00 42.79 C
ATOM 7 C4' G A 554 97.259 -16.117 27.898 1.00 42.47 C
ATOM 8 O4' G A 554 96.213 -16.337 28.872 1.00 42.07 O
ATOM 9 C3' G A 554 98.128 -15.007 28.460 1.00 42.48 C
ATOM 10 O3' G A 554 97.760 -13.807 27.851 1.00 42.43 O
ATOM 11 C2' G A 554 97.730 -14.936 29.927 1.00 42.10 C
ATOM 12 O2' G A 554 97.876 -13.647 30.505 1.00 41.94 O
ATOM 13 C1' G A 554 96.278 -15.333 29.854 1.00 41.82 C
ATOM 14 N9 G A 554 95.739 -15.830 31.109 1.00 41.51 N
ATOM 15 C8 G A 554 96.442 -16.369 32.141 1.00 41.52 C
ATOM 16 N7 G A 554 95.693 -16.681 33.161 1.00 41.21 N
ATOM 17 C5 G A 554 94.422 -16.272 32.774 1.00 40.96 C
ATOM 18 C6 G A 554 93.195 -16.319 33.460 1.00 40.59 C
ATOM 19 O6 G A 554 92.994 -16.752 34.569 1.00 40.40 O
ATOM 20 N1 G A 554 92.129 -15.826 32.760 1.00 40.45 N
ATOM 21 C2 G A 554 92.233 -15.294 31.522 1.00 40.65 C
ATOM 22 N2 G A 554 91.062 -14.856 31.036 1.00 40.47 N
ATOM 23 N3 G A 554 93.366 -15.228 30.823 1.00 41.01 N
ATOM 24 C4 G A 554 94.424 -15.741 31.510 1.00 41.14 C
ATOM 25 P A A 555 98.706 -13.172 26.780 1.00 42.80 P
ATOM 26 OP1 A A 555 98.174 -13.567 25.452 1.00 42.98 O
ATOM 27 OP2 A A 555 100.076 -13.543 27.130 1.00 43.07 O
ATOM 28 O5' A A 555 98.505 -11.636 27.064 1.00 42.61 O
TER
ATOM 1 O3' C B1279 84.608 -17.033 28.125 1.00 43.55 O
ATOM 2 P U B1280 85.045 -17.351 29.641 1.00 39.88 P
ATOM 3 OP1 U B1280 86.054 -18.368 29.567 1.00 40.16 O
ATOM 4 OP2 U B1280 83.845 -17.648 30.398 1.00 39.56 O
ATOM 5 O5' U B1280 85.651 -15.978 30.156 1.00 39.78 O
ATOM 6 C5' U B1280 86.926 -15.506 29.763 1.00 40.04 C
ATOM 7 C4' U B1280 87.228 -14.134 30.375 1.00 39.89 C
ATOM 8 O4' U B1280 86.201 -13.175 29.990 1.00 39.72 O
ATOM 9 C3' U B1280 87.230 -14.053 31.893 1.00 39.60 C
ATOM 10 O3' U B1280 88.420 -14.515 32.455 1.00 39.75 O
ATOM 11 C2' U B1280 86.969 -12.572 32.149 1.00 39.42 C
ATOM 12 O2' U B1280 88.138 -11.815 31.866 1.00 39.65 O
ATOM 13 C1' U B1280 85.936 -12.276 31.063 1.00 39.43 C
ATOM 14 N1 U B1280 84.510 -12.486 31.543 1.00 39.10 N
ATOM 15 C2 U B1280 83.878 -11.549 32.351 1.00 38.81 C
ATOM 16 O2 U B1280 84.338 -10.532 32.728 1.00 38.78 O
ATOM 17 N3 U B1280 82.642 -11.775 32.788 1.00 38.54 N
ATOM 18 C4 U B1280 81.915 -12.869 32.531 1.00 38.52 C
ATOM 19 O4 U B1280 80.782 -12.912 33.010 1.00 38.27 O
ATOM 20 C5 U B1280 82.600 -13.830 31.719 1.00 38.83 C
ATOM 21 C6 U B1280 83.815 -13.625 31.244 1.00 39.11 C
ATOM 22 P A B1281 88.415 -15.183 33.902 1.00 41.09 P
ATOM 23 OP1 A B1281 89.619 -16.064 33.960 1.00 41.37 O
ATOM 24 OP2 A B1281 87.082 -15.768 34.107 1.00 40.85 O
ATOM 25 O5' A B1281 88.620 -13.941 34.884 1.00 40.89 O
TER
ATOM 2 P G A 554 99.702 -18.924 28.834 1.00 43.10 P
ATOM 3 OP1 G A 554 100.805 -18.281 28.099 1.00 43.45 O
ATOM 4 OP2 G A 554 99.941 -19.454 30.183 1.00 42.96 O
ATOM 5 O5' G A 554 98.480 -17.938 28.869 1.00 42.72 O
ATOM 6 C5' G A 554 97.968 -17.396 27.660 1.00 42.79 C
ATOM 7 C4' G A 554 97.259 -16.117 27.898 1.00 42.47 C
ATOM 8 O4' G A 554 96.213 -16.337 28.872 1.00 42.07 O
ATOM 9 C3' G A 554 98.128 -15.007 28.460 1.00 42.48 C
ATOM 10 O3' G A 554 97.760 -13.807 27.851 1.00 42.43 O
ATOM 11 C2' G A 554 97.730 -14.936 29.927 1.00 42.10 C
ATOM 12 O2' G A 554 97.876 -13.647 30.505 1.00 41.94 O
ATOM 13 C1' G A 554 96.278 -15.333 29.854 1.00 41.82 C
ATOM 14 N9 G A 554 95.739 -15.830 31.109 1.00 41.51 N
ATOM 15 C8 G A 554 96.442 -16.369 32.141 1.00 41.52 C
ATOM 16 N7 G A 554 95.693 -16.681 33.161 1.00 41.21 N
ATOM 17 C5 G A 554 94.422 -16.272 32.774 1.00 40.96 C
ATOM 18 C6 G A 554 93.195 -16.319 33.460 1.00 40.59 C
ATOM 19 O6 G A 554 92.994 -16.752 34.569 1.00 40.40 O
ATOM 20 N1 G A 554 92.129 -15.826 32.760 1.00 40.45 N
ATOM 21 C2 G A 554 92.233 -15.294 31.522 1.00 40.65 C
ATOM 22 N2 G A 554 91.062 -14.856 31.036 1.00 40.47 N
ATOM 23 N3 G A 554 93.366 -15.228 30.823 1.00 41.01 N
ATOM 24 C4 G A 554 94.424 -15.741 31.510 1.00 41.14 C
ATOM 25 P A A 555 98.706 -13.172 26.780 1.00 42.80 P
ATOM 26 OP1 A A 555 98.174 -13.567 25.452 1.00 42.98 O
ATOM 27 OP2 A A 555 100.076 -13.543 27.130 1.00 43.07 O
ATOM 28 O5' A A 555 98.505 -11.636 27.064 1.00 42.61 O
TER
ATOM 1 O3' C B1279 84.608 -17.033 28.125 1.00 43.55 O
ATOM 2 P U B1280 85.045 -17.351 29.641 1.00 39.88 P
ATOM 3 OP1 U B1280 86.054 -18.368 29.567 1.00 40.16 O
ATOM 4 OP2 U B1280 83.845 -17.648 30.398 1.00 39.56 O
ATOM 5 O5' U B1280 85.651 -15.978 30.156 1.00 39.78 O
ATOM 6 C5' U B1280 86.926 -15.506 29.763 1.00 40.04 C
ATOM 7 C4' U B1280 87.228 -14.134 30.375 1.00 39.89 C
ATOM 8 O4' U B1280 86.201 -13.175 29.990 1.00 39.72 O
ATOM 9 C3' U B1280 87.230 -14.053 31.893 1.00 39.60 C
ATOM 10 O3' U B1280 88.420 -14.515 32.455 1.00 39.75 O
ATOM 11 C2' U B1280 86.969 -12.572 32.149 1.00 39.42 C
ATOM 12 O2' U B1280 88.138 -11.815 31.866 1.00 39.65 O
ATOM 13 C1' U B1280 85.936 -12.276 31.063 1.00 39.43 C
ATOM 14 N1 U B1280 84.510 -12.486 31.543 1.00 39.10 N
ATOM 15 C2 U B1280 83.878 -11.549 32.351 1.00 38.81 C
ATOM 16 O2 U B1280 84.338 -10.532 32.728 1.00 38.78 O
ATOM 17 N3 U B1280 82.642 -11.775 32.788 1.00 38.54 N
ATOM 18 C4 U B1280 81.915 -12.869 32.531 1.00 38.52 C
ATOM 19 O4 U B1280 80.782 -12.912 33.010 1.00 38.27 O
ATOM 20 C5 U B1280 82.600 -13.830 31.719 1.00 38.83 C
ATOM 21 C6 U B1280 83.815 -13.625 31.244 1.00 39.11 C
ATOM 22 P A B1281 88.415 -15.183 33.902 1.00 41.09 P
ATOM 23 OP1 A B1281 89.619 -16.064 33.960 1.00 41.37 O
ATOM 24 OP2 A B1281 87.082 -15.768 34.107 1.00 40.85 O
ATOM 25 O5' A B1281 88.620 -13.941 34.884 1.00 40.89 O
TER
Atoms:
OP1: (100.805,-18.281,28.099)
OP2: (99.941,-19.454,30.183)
C3': (98.128,-15.007,28.460)
C1': (96.278,-15.333,29.854)
C5': (97.968,-17.396,27.660)
O6: (92.994,-16.752,34.569)
O4': (96.213,-16.337,28.872)
C8: (96.442,-16.369,32.141)
C2: (92.233,-15.294,31.522)
C6: (93.195,-16.319,33.460)
C5: (94.422,-16.272,32.774)
C4: (94.424,-15.741,31.510)
P: (99.702,-18.924,28.834)
C4': (97.259,-16.117,27.898)
C2': (97.730,-14.936,29.927)
O2': (97.876,-13.647,30.505)
N1: (92.129,-15.826,32.760)
N2: (91.062,-14.856,31.036)
N3: (93.366,-15.228,30.823)
N7: (95.693,-16.681,33.161)
N9: (95.739,-15.830,31.109)
O5': (98.480,-17.938,28.869)
O3': (97.760,-13.807,27.851)
OP2: (99.941,-19.454,30.183)
C3': (98.128,-15.007,28.460)
C1': (96.278,-15.333,29.854)
C5': (97.968,-17.396,27.660)
O6: (92.994,-16.752,34.569)
O4': (96.213,-16.337,28.872)
C8: (96.442,-16.369,32.141)
C2: (92.233,-15.294,31.522)
C6: (93.195,-16.319,33.460)
C5: (94.422,-16.272,32.774)
C4: (94.424,-15.741,31.510)
P: (99.702,-18.924,28.834)
C4': (97.259,-16.117,27.898)
C2': (97.730,-14.936,29.927)
O2': (97.876,-13.647,30.505)
N1: (92.129,-15.826,32.760)
N2: (91.062,-14.856,31.036)
N3: (93.366,-15.228,30.823)
N7: (95.693,-16.681,33.161)
N9: (95.739,-15.830,31.109)
O5': (98.480,-17.938,28.869)
O3': (97.760,-13.807,27.851)
C4: (81.915,-12.869,32.531)
N3: (82.642,-11.775,32.788)
OP1: (86.054,-18.368,29.567)
OP2: (83.845,-17.648,30.398)
C2: (83.878,-11.549,32.351)
C1': (85.936,-12.276,31.063)
C3': (87.230,-14.053,31.893)
O5': (85.651,-15.978,30.156)
O4': (86.201,-13.175,29.990)
C5': (86.926,-15.506,29.763)
P: (85.045,-17.351,29.641)
C4': (87.228,-14.134,30.375)
C2': (86.969,-12.572,32.149)
O2': (88.138,-11.815,31.866)
N1: (84.510,-12.486,31.543)
O4: (80.782,-12.912,33.010)
O2: (84.338,-10.532,32.728)
C6: (83.815,-13.625,31.244)
C5: (82.600,-13.830,31.719)
O3': (88.420,-14.515,32.455)
N3: (82.642,-11.775,32.788)
OP1: (86.054,-18.368,29.567)
OP2: (83.845,-17.648,30.398)
C2: (83.878,-11.549,32.351)
C1': (85.936,-12.276,31.063)
C3': (87.230,-14.053,31.893)
O5': (85.651,-15.978,30.156)
O4': (86.201,-13.175,29.990)
C5': (86.926,-15.506,29.763)
P: (85.045,-17.351,29.641)
C4': (87.228,-14.134,30.375)
C2': (86.969,-12.572,32.149)
O2': (88.138,-11.815,31.866)
N1: (84.510,-12.486,31.543)
O4: (80.782,-12.912,33.010)
O2: (84.338,-10.532,32.728)
C6: (83.815,-13.625,31.244)
C5: (82.600,-13.830,31.719)
O3': (88.420,-14.515,32.455)
Image (generated by PyMOL):