ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5485:5505

Extra

PDB:
ATOM 1 O3' U A 484 110.934 12.552 323.701 1.00 66.71 O
ATOM 2 P G A 485 110.832 12.856 325.285 1.00 63.97 P
ATOM 3 OP1 G A 485 111.084 14.303 325.473 1.00 64.05 O
ATOM 4 OP2 G A 485 111.690 11.882 325.997 1.00 64.05 O
ATOM 5 O5' G A 485 109.334 12.539 325.569 1.00 64.38 O
ATOM 6 C5' G A 485 108.932 11.267 325.987 1.00 64.60 C
ATOM 7 C4' G A 485 107.719 11.415 326.808 1.00 65.21 C
ATOM 8 O4' G A 485 107.581 10.263 327.648 1.00 65.56 O
ATOM 9 C3' G A 485 107.766 12.611 327.735 1.00 65.63 C
ATOM 10 O3' G A 485 106.439 13.048 327.998 1.00 66.05 O
ATOM 11 C2' G A 485 108.355 12.009 328.987 1.00 66.02 C
ATOM 12 O2' G A 485 108.089 12.737 330.161 1.00 66.61 O
ATOM 13 C1' G A 485 107.672 10.648 328.998 1.00 66.13 C
ATOM 14 N9 G A 485 108.423 9.613 329.684 1.00 66.24 N
ATOM 15 C8 G A 485 109.602 9.130 329.217 1.00 65.77 C
ATOM 16 N7 G A 485 110.084 8.191 329.960 1.00 65.97 N
ATOM 17 C5 G A 485 109.150 8.041 330.966 1.00 66.61 C
ATOM 18 C6 G A 485 109.164 7.166 332.062 1.00 67.08 C
ATOM 19 O6 G A 485 110.035 6.335 332.330 1.00 67.01 O
ATOM 20 N1 G A 485 108.044 7.318 332.854 1.00 67.68 N
ATOM 21 C2 G A 485 107.053 8.217 332.615 1.00 67.81 C
ATOM 22 N2 G A 485 106.047 8.212 333.484 1.00 68.43 N
ATOM 23 N3 G A 485 107.021 9.052 331.596 1.00 67.37 N
ATOM 24 C4 G A 485 108.103 8.904 330.808 1.00 66.78 C
ATOM 25 P U A 486 105.958 14.510 327.545 1.00 62.60 P
ATOM 26 OP1 U A 486 105.900 14.518 326.064 1.00 61.99 O
ATOM 27 OP2 U A 486 106.834 15.469 328.224 1.00 62.74 O
ATOM 28 O5' U A 486 104.484 14.593 328.158 1.00 63.20 O
TER

ATOM 1 O3' A B 504 105.710 6.260 338.800 1.00104.59 O
ATOM 2 P U B 505 106.218 4.759 338.582 1.00 81.87 P
ATOM 3 OP1 U B 505 106.458 4.183 339.929 1.00 82.48 O
ATOM 4 OP2 U B 505 107.359 4.809 337.605 1.00 81.15 O
ATOM 5 O5' U B 505 104.932 4.073 337.909 1.00 81.85 O
ATOM 6 C5' U B 505 104.956 3.605 336.551 1.00 81.19 C
ATOM 7 C4' U B 505 104.060 4.425 335.634 1.00 80.97 C
ATOM 8 O4' U B 505 104.912 5.138 334.687 1.00 80.33 O
ATOM 9 C3' U B 505 103.075 3.596 334.788 1.00 80.81 C
ATOM 10 O3' U B 505 101.835 4.298 334.593 1.00 81.02 O
ATOM 11 C2' U B 505 103.804 3.463 333.461 1.00 80.03 C
ATOM 12 O2' U B 505 102.971 3.279 332.353 1.00 79.73 O
ATOM 13 C1' U B 505 104.571 4.774 333.362 1.00 79.80 C
ATOM 14 N1 U B 505 105.799 4.641 332.575 1.00 79.16 N
ATOM 15 C2 U B 505 106.010 5.440 331.505 1.00 78.64 C
ATOM 16 O2 U B 505 105.227 6.311 331.268 1.00 78.71 O
ATOM 17 N3 U B 505 107.159 5.218 330.782 1.00 78.06 N
ATOM 18 C4 U B 505 108.094 4.233 331.025 1.00 77.96 C
ATOM 19 O4 U B 505 109.105 4.072 330.346 1.00 77.44 O
ATOM 20 C5 U B 505 107.762 3.423 332.140 1.00 78.53 C
ATOM 21 C6 U B 505 106.654 3.636 332.845 1.00 79.09 C
ATOM 22 P U B 506 100.406 3.599 334.970 1.00 76.42 P
ATOM 23 OP1 U B 506 100.306 3.563 336.471 1.00 77.15 O
ATOM 24 OP2 U B 506 100.316 2.336 334.231 1.00 76.11 O
ATOM 25 O5' U B 506 99.335 4.625 334.385 1.00 76.42 O
TER

Atoms:
OP1: (111.084,14.303,325.473)
OP2: (111.690,11.882,325.997)
C3': (107.766,12.611,327.735)
C1': (107.672,10.648,328.998)
C5': (108.932,11.267,325.987)
O6: (110.035,6.335,332.330)
O4': (107.581,10.263,327.648)
C8: (109.602,9.130,329.217)
C2: (107.053,8.217,332.615)
C6: (109.164,7.166,332.062)
C5: (109.150,8.041,330.966)
C4: (108.103,8.904,330.808)
P: (110.832,12.856,325.285)
C4': (107.719,11.415,326.808)
C2': (108.355,12.009,328.987)
O2': (108.089,12.737,330.161)
N1: (108.044,7.318,332.854)
N2: (106.047,8.212,333.484)
N3: (107.021,9.052,331.596)
N7: (110.084,8.191,329.960)
N9: (108.423,9.613,329.684)
O5': (109.334,12.539,325.569)
O3': (106.439,13.048,327.998)
C4: (108.094,4.233,331.025)
N3: (107.159,5.218,330.782)
OP1: (106.458,4.183,339.929)
OP2: (107.359,4.809,337.605)
C2: (106.010,5.440,331.505)
C1': (104.571,4.774,333.362)
C3': (103.075,3.596,334.788)
O5': (104.932,4.073,337.909)
O4': (104.912,5.138,334.687)
C5': (104.956,3.605,336.551)
P: (106.218,4.759,338.582)
C4': (104.060,4.425,335.634)
C2': (103.804,3.463,333.461)
O2': (102.971,3.279,332.353)
N1: (105.799,4.641,332.575)
O4: (109.105,4.072,330.346)
O2: (105.227,6.311,331.268)
C6: (106.654,3.636,332.845)
C5: (107.762,3.423,332.140)
O3': (101.835,4.298,334.593)
Image (generated by PyMOL):
PyMOL image
show in jmol