Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5560:51286
Extra
PDB:
ATOM 1 O3' G A 559 71.196 -16.478 257.573 1.00 50.09 O
ATOM 2 P G A 560 70.922 -15.494 256.303 1.00 51.09 P
ATOM 3 OP1 G A 560 69.610 -14.854 256.513 1.00 51.50 O
ATOM 4 OP2 G A 560 71.176 -16.265 255.044 1.00 51.06 O
ATOM 5 O5' G A 560 72.043 -14.408 256.461 1.00 50.56 O
ATOM 6 C5' G A 560 72.100 -13.599 257.607 1.00 50.48 C
ATOM 7 C4' G A 560 72.906 -12.355 257.375 1.00 50.05 C
ATOM 8 O4' G A 560 74.096 -12.676 256.640 1.00 49.64 O
ATOM 9 C3' G A 560 72.206 -11.229 256.626 1.00 50.16 C
ATOM 10 O3' G A 560 72.419 -10.025 257.347 1.00 49.99 O
ATOM 11 C2' G A 560 72.962 -11.159 255.289 1.00 49.85 C
ATOM 12 O2' G A 560 73.052 -9.856 254.757 1.00 49.68 O
ATOM 13 C1' G A 560 74.335 -11.679 255.685 1.00 49.43 C
ATOM 14 N9 G A 560 75.128 -12.282 254.609 1.00 49.19 N
ATOM 15 C8 G A 560 74.759 -13.045 253.524 1.00 49.38 C
ATOM 16 N7 G A 560 75.781 -13.452 252.790 1.00 49.07 N
ATOM 17 C5 G A 560 76.889 -12.944 253.446 1.00 48.64 C
ATOM 18 C6 G A 560 78.265 -13.056 253.143 1.00 48.19 C
ATOM 19 O6 G A 560 78.783 -13.649 252.214 1.00 48.08 O
ATOM 20 N1 G A 560 79.092 -12.394 254.027 1.00 47.86 N
ATOM 21 C2 G A 560 78.631 -11.691 255.108 1.00 47.96 C
ATOM 22 N2 G A 560 79.583 -11.118 255.868 1.00 47.61 N
ATOM 23 N3 G A 560 77.324 -11.574 255.427 1.00 48.39 N
ATOM 24 C4 G A 560 76.509 -12.233 254.562 1.00 48.71 C
ATOM 25 P A A 561 71.195 -9.103 257.820 1.00 49.56 P
ATOM 26 OP1 A A 561 71.177 -9.094 259.299 1.00 49.63 O
ATOM 27 OP2 A A 561 70.005 -9.576 257.096 1.00 50.01 O
ATOM 28 O5' A A 561 71.628 -7.661 257.306 1.00 49.26 O
TER
ATOM 1 O3' C B1285 85.403 -12.613 260.375 1.00 40.55 O
ATOM 2 P U B1286 85.218 -12.993 258.827 1.00 42.76 P
ATOM 3 OP1 U B1286 84.158 -14.007 258.779 1.00 43.20 O
ATOM 4 OP2 U B1286 86.538 -13.333 258.255 1.00 42.39 O
ATOM 5 O5' U B1286 84.727 -11.619 258.194 1.00 42.74 O
ATOM 6 C5' U B1286 83.370 -11.283 258.057 1.00 43.12 C
ATOM 7 C4' U B1286 83.216 -10.082 257.172 1.00 43.02 C
ATOM 8 O4' U B1286 84.094 -9.023 257.631 1.00 42.67 O
ATOM 9 C3' U B1286 83.613 -10.266 255.717 1.00 42.88 C
ATOM 10 O3' U B1286 82.621 -10.941 254.964 1.00 43.23 O
ATOM 11 C2' U B1286 83.851 -8.830 255.284 1.00 42.66 C
ATOM 12 O2' U B1286 82.622 -8.161 255.127 1.00 42.98 O
ATOM 13 C1' U B1286 84.543 -8.257 256.522 1.00 42.43 C
ATOM 14 N1 U B1286 86.032 -8.379 256.407 1.00 41.99 N
ATOM 15 C2 U B1286 86.788 -7.454 255.677 1.00 41.67 C
ATOM 16 O2 U B1286 86.298 -6.479 255.163 1.00 41.73 O
ATOM 17 N3 U B1286 88.131 -7.699 255.572 1.00 41.30 N
ATOM 18 C4 U B1286 88.763 -8.797 256.118 1.00 41.23 C
ATOM 19 O4 U B1286 89.965 -8.996 255.992 1.00 40.90 O
ATOM 20 C5 U B1286 87.937 -9.685 256.851 1.00 41.56 C
ATOM 21 C6 U B1286 86.653 -9.465 256.957 1.00 41.92 C
ATOM 22 P A B1287 82.922 -11.600 253.517 1.00 46.72 P
ATOM 23 OP1 A B1287 81.740 -12.370 253.158 1.00 47.17 O
ATOM 24 OP2 A B1287 84.206 -12.300 253.587 1.00 46.40 O
ATOM 25 O5' A B1287 83.050 -10.339 252.562 1.00 46.55 O
TER
ATOM 2 P G A 560 70.922 -15.494 256.303 1.00 51.09 P
ATOM 3 OP1 G A 560 69.610 -14.854 256.513 1.00 51.50 O
ATOM 4 OP2 G A 560 71.176 -16.265 255.044 1.00 51.06 O
ATOM 5 O5' G A 560 72.043 -14.408 256.461 1.00 50.56 O
ATOM 6 C5' G A 560 72.100 -13.599 257.607 1.00 50.48 C
ATOM 7 C4' G A 560 72.906 -12.355 257.375 1.00 50.05 C
ATOM 8 O4' G A 560 74.096 -12.676 256.640 1.00 49.64 O
ATOM 9 C3' G A 560 72.206 -11.229 256.626 1.00 50.16 C
ATOM 10 O3' G A 560 72.419 -10.025 257.347 1.00 49.99 O
ATOM 11 C2' G A 560 72.962 -11.159 255.289 1.00 49.85 C
ATOM 12 O2' G A 560 73.052 -9.856 254.757 1.00 49.68 O
ATOM 13 C1' G A 560 74.335 -11.679 255.685 1.00 49.43 C
ATOM 14 N9 G A 560 75.128 -12.282 254.609 1.00 49.19 N
ATOM 15 C8 G A 560 74.759 -13.045 253.524 1.00 49.38 C
ATOM 16 N7 G A 560 75.781 -13.452 252.790 1.00 49.07 N
ATOM 17 C5 G A 560 76.889 -12.944 253.446 1.00 48.64 C
ATOM 18 C6 G A 560 78.265 -13.056 253.143 1.00 48.19 C
ATOM 19 O6 G A 560 78.783 -13.649 252.214 1.00 48.08 O
ATOM 20 N1 G A 560 79.092 -12.394 254.027 1.00 47.86 N
ATOM 21 C2 G A 560 78.631 -11.691 255.108 1.00 47.96 C
ATOM 22 N2 G A 560 79.583 -11.118 255.868 1.00 47.61 N
ATOM 23 N3 G A 560 77.324 -11.574 255.427 1.00 48.39 N
ATOM 24 C4 G A 560 76.509 -12.233 254.562 1.00 48.71 C
ATOM 25 P A A 561 71.195 -9.103 257.820 1.00 49.56 P
ATOM 26 OP1 A A 561 71.177 -9.094 259.299 1.00 49.63 O
ATOM 27 OP2 A A 561 70.005 -9.576 257.096 1.00 50.01 O
ATOM 28 O5' A A 561 71.628 -7.661 257.306 1.00 49.26 O
TER
ATOM 1 O3' C B1285 85.403 -12.613 260.375 1.00 40.55 O
ATOM 2 P U B1286 85.218 -12.993 258.827 1.00 42.76 P
ATOM 3 OP1 U B1286 84.158 -14.007 258.779 1.00 43.20 O
ATOM 4 OP2 U B1286 86.538 -13.333 258.255 1.00 42.39 O
ATOM 5 O5' U B1286 84.727 -11.619 258.194 1.00 42.74 O
ATOM 6 C5' U B1286 83.370 -11.283 258.057 1.00 43.12 C
ATOM 7 C4' U B1286 83.216 -10.082 257.172 1.00 43.02 C
ATOM 8 O4' U B1286 84.094 -9.023 257.631 1.00 42.67 O
ATOM 9 C3' U B1286 83.613 -10.266 255.717 1.00 42.88 C
ATOM 10 O3' U B1286 82.621 -10.941 254.964 1.00 43.23 O
ATOM 11 C2' U B1286 83.851 -8.830 255.284 1.00 42.66 C
ATOM 12 O2' U B1286 82.622 -8.161 255.127 1.00 42.98 O
ATOM 13 C1' U B1286 84.543 -8.257 256.522 1.00 42.43 C
ATOM 14 N1 U B1286 86.032 -8.379 256.407 1.00 41.99 N
ATOM 15 C2 U B1286 86.788 -7.454 255.677 1.00 41.67 C
ATOM 16 O2 U B1286 86.298 -6.479 255.163 1.00 41.73 O
ATOM 17 N3 U B1286 88.131 -7.699 255.572 1.00 41.30 N
ATOM 18 C4 U B1286 88.763 -8.797 256.118 1.00 41.23 C
ATOM 19 O4 U B1286 89.965 -8.996 255.992 1.00 40.90 O
ATOM 20 C5 U B1286 87.937 -9.685 256.851 1.00 41.56 C
ATOM 21 C6 U B1286 86.653 -9.465 256.957 1.00 41.92 C
ATOM 22 P A B1287 82.922 -11.600 253.517 1.00 46.72 P
ATOM 23 OP1 A B1287 81.740 -12.370 253.158 1.00 47.17 O
ATOM 24 OP2 A B1287 84.206 -12.300 253.587 1.00 46.40 O
ATOM 25 O5' A B1287 83.050 -10.339 252.562 1.00 46.55 O
TER
Atoms:
OP1: (69.610,-14.854,256.513)
OP2: (71.176,-16.265,255.044)
C3': (72.206,-11.229,256.626)
C1': (74.335,-11.679,255.685)
C5': (72.100,-13.599,257.607)
O6: (78.783,-13.649,252.214)
O4': (74.096,-12.676,256.640)
C8: (74.759,-13.045,253.524)
C2: (78.631,-11.691,255.108)
C6: (78.265,-13.056,253.143)
C5: (76.889,-12.944,253.446)
C4: (76.509,-12.233,254.562)
P: (70.922,-15.494,256.303)
C4': (72.906,-12.355,257.375)
C2': (72.962,-11.159,255.289)
O2': (73.052,-9.856,254.757)
N1: (79.092,-12.394,254.027)
N2: (79.583,-11.118,255.868)
N3: (77.324,-11.574,255.427)
N7: (75.781,-13.452,252.790)
N9: (75.128,-12.282,254.609)
O5': (72.043,-14.408,256.461)
O3': (72.419,-10.025,257.347)
OP2: (71.176,-16.265,255.044)
C3': (72.206,-11.229,256.626)
C1': (74.335,-11.679,255.685)
C5': (72.100,-13.599,257.607)
O6: (78.783,-13.649,252.214)
O4': (74.096,-12.676,256.640)
C8: (74.759,-13.045,253.524)
C2: (78.631,-11.691,255.108)
C6: (78.265,-13.056,253.143)
C5: (76.889,-12.944,253.446)
C4: (76.509,-12.233,254.562)
P: (70.922,-15.494,256.303)
C4': (72.906,-12.355,257.375)
C2': (72.962,-11.159,255.289)
O2': (73.052,-9.856,254.757)
N1: (79.092,-12.394,254.027)
N2: (79.583,-11.118,255.868)
N3: (77.324,-11.574,255.427)
N7: (75.781,-13.452,252.790)
N9: (75.128,-12.282,254.609)
O5': (72.043,-14.408,256.461)
O3': (72.419,-10.025,257.347)
C4: (88.763,-8.797,256.118)
N3: (88.131,-7.699,255.572)
OP1: (84.158,-14.007,258.779)
OP2: (86.538,-13.333,258.255)
C2: (86.788,-7.454,255.677)
C1': (84.543,-8.257,256.522)
C3': (83.613,-10.266,255.717)
O5': (84.727,-11.619,258.194)
O4': (84.094,-9.023,257.631)
C5': (83.370,-11.283,258.057)
P: (85.218,-12.993,258.827)
C4': (83.216,-10.082,257.172)
C2': (83.851,-8.830,255.284)
O2': (82.622,-8.161,255.127)
N1: (86.032,-8.379,256.407)
O4: (89.965,-8.996,255.992)
O2: (86.298,-6.479,255.163)
C6: (86.653,-9.465,256.957)
C5: (87.937,-9.685,256.851)
O3': (82.621,-10.941,254.964)
N3: (88.131,-7.699,255.572)
OP1: (84.158,-14.007,258.779)
OP2: (86.538,-13.333,258.255)
C2: (86.788,-7.454,255.677)
C1': (84.543,-8.257,256.522)
C3': (83.613,-10.266,255.717)
O5': (84.727,-11.619,258.194)
O4': (84.094,-9.023,257.631)
C5': (83.370,-11.283,258.057)
P: (85.218,-12.993,258.827)
C4': (83.216,-10.082,257.172)
C2': (83.851,-8.830,255.284)
O2': (82.622,-8.161,255.127)
N1: (86.032,-8.379,256.407)
O4: (89.965,-8.996,255.992)
O2: (86.298,-6.479,255.163)
C6: (86.653,-9.465,256.957)
C5: (87.937,-9.685,256.851)
O3': (82.621,-10.941,254.964)
Image (generated by PyMOL):