Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0556:0555
Extra
PDB:
ATOM 1 O3' U A 555 4.308 92.294 107.843 1.00 38.27 O
ATOM 2 P G A 556 3.791 91.748 109.270 1.00 38.49 P
ATOM 3 OP1 G A 556 4.781 92.195 110.295 1.00 38.70 O
ATOM 4 OP2 G A 556 3.497 90.295 109.111 1.00 33.23 O
ATOM 5 O5' G A 556 2.457 92.575 109.544 1.00 36.53 O
ATOM 6 C5' G A 556 2.516 93.896 110.107 1.00 38.71 C
ATOM 7 C4' G A 556 1.118 94.426 110.348 1.00 42.66 C
ATOM 8 O4' G A 556 0.423 94.593 109.078 1.00 42.85 O
ATOM 9 C3' G A 556 0.195 93.513 111.135 1.00 43.02 C
ATOM 10 O3' G A 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 11 C2' G A 556 -1.179 94.020 110.728 1.00 43.38 C
ATOM 12 O2' G A 556 -1.531 95.230 111.369 1.00 44.47 O
ATOM 13 C1' G A 556 -0.956 94.281 109.240 1.00 42.25 C
ATOM 14 N9 G A 556 -1.243 93.091 108.446 1.00 40.63 N
ATOM 15 C8 G A 556 -0.353 92.116 108.073 1.00 40.45 C
ATOM 16 N7 G A 556 -0.900 91.165 107.367 1.00 40.42 N
ATOM 17 C5 G A 556 -2.231 91.532 107.270 1.00 40.23 C
ATOM 18 C6 G A 556 -3.301 90.887 106.626 1.00 40.50 C
ATOM 19 O6 G A 556 -3.283 89.830 105.995 1.00 43.13 O
ATOM 20 N1 G A 556 -4.490 91.597 106.767 1.00 39.64 N
ATOM 21 C2 G A 556 -4.622 92.784 107.444 1.00 41.42 C
ATOM 22 N2 G A 556 -5.848 93.326 107.465 1.00 41.69 N
ATOM 23 N3 G A 556 -3.620 93.399 108.056 1.00 42.29 N
ATOM 24 C4 G A 556 -2.461 92.720 107.928 1.00 41.11 C
ATOM 25 P A A 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 26 OP1 A A 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 27 OP2 A A 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 28 O5' A A 557 -1.683 92.585 113.460 1.00 48.32 O
TER
ATOM 1 O3' A B 554 3.648 89.551 102.260 1.00 37.21 O
ATOM 2 P U B 555 3.017 89.074 103.661 1.00 37.64 P
ATOM 3 OP1 U B 555 3.880 87.999 104.202 1.00 33.83 O
ATOM 4 OP2 U B 555 1.562 88.810 103.439 1.00 38.34 O
ATOM 5 O5' U B 555 3.115 90.369 104.590 1.00 34.94 O
ATOM 6 C5' U B 555 4.379 90.987 104.879 1.00 34.18 C
ATOM 7 C4' U B 555 4.156 92.365 105.437 1.00 35.06 C
ATOM 8 O4' U B 555 3.324 93.101 104.507 1.00 36.94 O
ATOM 9 C3' U B 555 3.400 92.412 106.751 1.00 35.79 C
ATOM 10 O3' U B 555 4.308 92.294 107.843 1.00 38.27 O
ATOM 11 C2' U B 555 2.746 93.785 106.712 1.00 36.44 C
ATOM 12 O2' U B 555 3.624 94.821 107.083 1.00 35.97 O
ATOM 13 C1' U B 555 2.417 93.919 105.224 1.00 38.64 C
ATOM 14 N1 U B 555 1.047 93.504 104.879 1.00 41.65 N
ATOM 15 C2 U B 555 0.026 94.419 105.097 1.00 41.99 C
ATOM 16 O2 U B 555 0.219 95.529 105.587 1.00 43.27 O
ATOM 17 N3 U B 555 -1.224 93.989 104.724 1.00 41.94 N
ATOM 18 C4 U B 555 -1.555 92.761 104.184 1.00 42.70 C
ATOM 19 O4 U B 555 -2.732 92.526 103.901 1.00 44.56 O
ATOM 20 C5 U B 555 -0.450 91.860 104.006 1.00 42.05 C
ATOM 21 C6 U B 555 0.780 92.250 104.347 1.00 41.21 C
ATOM 22 P G B 556 3.791 91.748 109.270 1.00 38.49 P
ATOM 23 OP1 G B 556 4.781 92.195 110.295 1.00 38.70 O
ATOM 24 OP2 G B 556 3.497 90.295 109.111 1.00 33.23 O
ATOM 25 O5' G B 556 2.457 92.575 109.544 1.00 36.53 O
TER
ATOM 2 P G A 556 3.791 91.748 109.270 1.00 38.49 P
ATOM 3 OP1 G A 556 4.781 92.195 110.295 1.00 38.70 O
ATOM 4 OP2 G A 556 3.497 90.295 109.111 1.00 33.23 O
ATOM 5 O5' G A 556 2.457 92.575 109.544 1.00 36.53 O
ATOM 6 C5' G A 556 2.516 93.896 110.107 1.00 38.71 C
ATOM 7 C4' G A 556 1.118 94.426 110.348 1.00 42.66 C
ATOM 8 O4' G A 556 0.423 94.593 109.078 1.00 42.85 O
ATOM 9 C3' G A 556 0.195 93.513 111.135 1.00 43.02 C
ATOM 10 O3' G A 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 11 C2' G A 556 -1.179 94.020 110.728 1.00 43.38 C
ATOM 12 O2' G A 556 -1.531 95.230 111.369 1.00 44.47 O
ATOM 13 C1' G A 556 -0.956 94.281 109.240 1.00 42.25 C
ATOM 14 N9 G A 556 -1.243 93.091 108.446 1.00 40.63 N
ATOM 15 C8 G A 556 -0.353 92.116 108.073 1.00 40.45 C
ATOM 16 N7 G A 556 -0.900 91.165 107.367 1.00 40.42 N
ATOM 17 C5 G A 556 -2.231 91.532 107.270 1.00 40.23 C
ATOM 18 C6 G A 556 -3.301 90.887 106.626 1.00 40.50 C
ATOM 19 O6 G A 556 -3.283 89.830 105.995 1.00 43.13 O
ATOM 20 N1 G A 556 -4.490 91.597 106.767 1.00 39.64 N
ATOM 21 C2 G A 556 -4.622 92.784 107.444 1.00 41.42 C
ATOM 22 N2 G A 556 -5.848 93.326 107.465 1.00 41.69 N
ATOM 23 N3 G A 556 -3.620 93.399 108.056 1.00 42.29 N
ATOM 24 C4 G A 556 -2.461 92.720 107.928 1.00 41.11 C
ATOM 25 P A A 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 26 OP1 A A 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 27 OP2 A A 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 28 O5' A A 557 -1.683 92.585 113.460 1.00 48.32 O
TER
ATOM 1 O3' A B 554 3.648 89.551 102.260 1.00 37.21 O
ATOM 2 P U B 555 3.017 89.074 103.661 1.00 37.64 P
ATOM 3 OP1 U B 555 3.880 87.999 104.202 1.00 33.83 O
ATOM 4 OP2 U B 555 1.562 88.810 103.439 1.00 38.34 O
ATOM 5 O5' U B 555 3.115 90.369 104.590 1.00 34.94 O
ATOM 6 C5' U B 555 4.379 90.987 104.879 1.00 34.18 C
ATOM 7 C4' U B 555 4.156 92.365 105.437 1.00 35.06 C
ATOM 8 O4' U B 555 3.324 93.101 104.507 1.00 36.94 O
ATOM 9 C3' U B 555 3.400 92.412 106.751 1.00 35.79 C
ATOM 10 O3' U B 555 4.308 92.294 107.843 1.00 38.27 O
ATOM 11 C2' U B 555 2.746 93.785 106.712 1.00 36.44 C
ATOM 12 O2' U B 555 3.624 94.821 107.083 1.00 35.97 O
ATOM 13 C1' U B 555 2.417 93.919 105.224 1.00 38.64 C
ATOM 14 N1 U B 555 1.047 93.504 104.879 1.00 41.65 N
ATOM 15 C2 U B 555 0.026 94.419 105.097 1.00 41.99 C
ATOM 16 O2 U B 555 0.219 95.529 105.587 1.00 43.27 O
ATOM 17 N3 U B 555 -1.224 93.989 104.724 1.00 41.94 N
ATOM 18 C4 U B 555 -1.555 92.761 104.184 1.00 42.70 C
ATOM 19 O4 U B 555 -2.732 92.526 103.901 1.00 44.56 O
ATOM 20 C5 U B 555 -0.450 91.860 104.006 1.00 42.05 C
ATOM 21 C6 U B 555 0.780 92.250 104.347 1.00 41.21 C
ATOM 22 P G B 556 3.791 91.748 109.270 1.00 38.49 P
ATOM 23 OP1 G B 556 4.781 92.195 110.295 1.00 38.70 O
ATOM 24 OP2 G B 556 3.497 90.295 109.111 1.00 33.23 O
ATOM 25 O5' G B 556 2.457 92.575 109.544 1.00 36.53 O
TER
Atoms:
OP1: (4.781,92.195,110.295)
OP2: (3.497,90.295,109.111)
C3': (0.195,93.513,111.135)
C1': (-0.956,94.281,109.240)
C5': (2.516,93.896,110.107)
O6: (-3.283,89.830,105.995)
O4': (0.423,94.593,109.078)
C8: (-0.353,92.116,108.073)
C2: (-4.622,92.784,107.444)
C6: (-3.301,90.887,106.626)
C5: (-2.231,91.532,107.270)
C4: (-2.461,92.720,107.928)
P: (3.791,91.748,109.270)
C4': (1.118,94.426,110.348)
C2': (-1.179,94.020,110.728)
O2': (-1.531,95.230,111.369)
N1: (-4.490,91.597,106.767)
N2: (-5.848,93.326,107.465)
N3: (-3.620,93.399,108.056)
N7: (-0.900,91.165,107.367)
N9: (-1.243,93.091,108.446)
O5': (2.457,92.575,109.544)
O3': (0.412,93.561,112.531)
OP2: (3.497,90.295,109.111)
C3': (0.195,93.513,111.135)
C1': (-0.956,94.281,109.240)
C5': (2.516,93.896,110.107)
O6: (-3.283,89.830,105.995)
O4': (0.423,94.593,109.078)
C8: (-0.353,92.116,108.073)
C2: (-4.622,92.784,107.444)
C6: (-3.301,90.887,106.626)
C5: (-2.231,91.532,107.270)
C4: (-2.461,92.720,107.928)
P: (3.791,91.748,109.270)
C4': (1.118,94.426,110.348)
C2': (-1.179,94.020,110.728)
O2': (-1.531,95.230,111.369)
N1: (-4.490,91.597,106.767)
N2: (-5.848,93.326,107.465)
N3: (-3.620,93.399,108.056)
N7: (-0.900,91.165,107.367)
N9: (-1.243,93.091,108.446)
O5': (2.457,92.575,109.544)
O3': (0.412,93.561,112.531)
C4: (-1.555,92.761,104.184)
N3: (-1.224,93.989,104.724)
OP1: (3.880,87.999,104.202)
OP2: (1.562,88.810,103.439)
C2: (0.026,94.419,105.097)
C1': (2.417,93.919,105.224)
C3': (3.400,92.412,106.751)
O5': (3.115,90.369,104.590)
O4': (3.324,93.101,104.507)
C5': (4.379,90.987,104.879)
P: (3.017,89.074,103.661)
C4': (4.156,92.365,105.437)
C2': (2.746,93.785,106.712)
O2': (3.624,94.821,107.083)
N1: (1.047,93.504,104.879)
O4: (-2.732,92.526,103.901)
O2: (0.219,95.529,105.587)
C6: (0.780,92.250,104.347)
C5: (-0.450,91.860,104.006)
O3': (4.308,92.294,107.843)
N3: (-1.224,93.989,104.724)
OP1: (3.880,87.999,104.202)
OP2: (1.562,88.810,103.439)
C2: (0.026,94.419,105.097)
C1': (2.417,93.919,105.224)
C3': (3.400,92.412,106.751)
O5': (3.115,90.369,104.590)
O4': (3.324,93.101,104.507)
C5': (4.379,90.987,104.879)
P: (3.017,89.074,103.661)
C4': (4.156,92.365,105.437)
C2': (2.746,93.785,106.712)
O2': (3.624,94.821,107.083)
N1: (1.047,93.504,104.879)
O4: (-2.732,92.526,103.901)
O2: (0.219,95.529,105.587)
C6: (0.780,92.250,104.347)
C5: (-0.450,91.860,104.006)
O3': (4.308,92.294,107.843)
Image (generated by PyMOL):