Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13055:13054
Extra
PDB:
ATOM 1 O3' U A3054 39.619 65.392 59.784 1.00 62.86 O
ATOM 2 P G A3055 38.591 64.746 60.803 1.00 62.13 P
ATOM 3 OP1 G A3055 37.943 65.888 61.516 1.00 62.69 O
ATOM 4 OP2 G A3055 39.324 63.718 61.596 1.00 61.63 O
ATOM 5 O5' G A3055 37.546 64.030 59.843 1.00 61.87 O
ATOM 6 C5' G A3055 37.630 64.177 58.432 1.00 61.96 C
ATOM 7 C4' G A3055 37.385 62.872 57.734 1.00 61.40 C
ATOM 8 O4' G A3055 38.655 62.207 57.500 1.00 61.04 O
ATOM 9 C3' G A3055 36.548 61.884 58.527 1.00 60.99 C
ATOM 10 O3' G A3055 35.860 61.039 57.627 1.00 60.68 O
ATOM 11 C2' G A3055 37.605 61.062 59.204 1.00 60.55 C
ATOM 12 O2' G A3055 37.151 59.811 59.646 1.00 60.02 O
ATOM 13 C1' G A3055 38.579 60.925 58.061 1.00 60.47 C
ATOM 14 N9 G A3055 39.907 60.432 58.445 1.00 60.18 N
ATOM 15 C8 G A3055 40.586 60.494 59.645 1.00 60.16 C
ATOM 16 N7 G A3055 41.716 59.833 59.626 1.00 59.84 N
ATOM 17 C5 G A3055 41.735 59.269 58.356 1.00 59.62 C
ATOM 18 C6 G A3055 42.665 58.418 57.730 1.00 59.24 C
ATOM 19 O6 G A3055 43.723 57.958 58.181 1.00 59.01 O
ATOM 20 N1 G A3055 42.263 58.090 56.442 1.00 59.16 N
ATOM 21 C2 G A3055 41.141 58.504 55.819 1.00 59.39 C
ATOM 22 N2 G A3055 40.962 58.078 54.564 1.00 59.28 N
ATOM 23 N3 G A3055 40.284 59.281 56.393 1.00 59.73 N
ATOM 24 C4 G A3055 40.635 59.611 57.633 1.00 59.82 C
ATOM 25 P U A3056 34.513 61.524 56.914 1.00 56.55 P
ATOM 26 OP1 U A3056 34.298 62.970 57.292 1.00 57.20 O
ATOM 27 OP2 U A3056 33.458 60.514 57.239 1.00 56.17 O
ATOM 28 O5' U A3056 34.903 61.433 55.392 1.00 56.55 O
TER
ATOM 1 O3' U B3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 2 P U B3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 3 OP1 U B3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 4 OP2 U B3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 5 O5' U B3054 43.130 65.042 61.848 1.00 62.56 O
ATOM 6 C5' U B3054 42.328 66.098 61.350 1.00 63.07 C
ATOM 7 C4' U B3054 41.963 65.868 59.913 1.00 62.99 C
ATOM 8 O4' U B3054 43.093 65.346 59.220 1.00 62.72 O
ATOM 9 C3' U B3054 40.891 64.847 59.658 1.00 62.56 C
ATOM 10 O3' U B3054 39.619 65.392 59.784 1.00 62.86 O
ATOM 11 C2' U B3054 41.176 64.380 58.249 1.00 62.35 C
ATOM 12 O2' U B3054 40.528 65.219 57.312 1.00 62.79 O
ATOM 13 C1' U B3054 42.669 64.594 58.133 1.00 62.40 C
ATOM 14 N1 U B3054 43.413 63.366 58.127 1.00 61.82 N
ATOM 15 C2 U B3054 43.308 62.666 56.964 1.00 61.54 C
ATOM 16 O2 U B3054 42.580 62.979 56.028 1.00 61.73 O
ATOM 17 N3 U B3054 44.080 61.566 56.972 1.00 61.04 N
ATOM 18 C4 U B3054 44.886 61.137 57.973 1.00 60.81 C
ATOM 19 O4 U B3054 45.472 60.087 57.735 1.00 60.35 O
ATOM 20 C5 U B3054 44.955 61.945 59.154 1.00 61.14 C
ATOM 21 C6 U B3054 44.230 63.048 59.183 1.00 61.64 C
ATOM 22 P G B3055 38.591 64.746 60.803 1.00 62.13 P
ATOM 23 OP1 G B3055 37.943 65.888 61.516 1.00 62.69 O
ATOM 24 OP2 G B3055 39.324 63.718 61.596 1.00 61.63 O
ATOM 25 O5' G B3055 37.546 64.030 59.843 1.00 61.87 O
TER
ATOM 2 P G A3055 38.591 64.746 60.803 1.00 62.13 P
ATOM 3 OP1 G A3055 37.943 65.888 61.516 1.00 62.69 O
ATOM 4 OP2 G A3055 39.324 63.718 61.596 1.00 61.63 O
ATOM 5 O5' G A3055 37.546 64.030 59.843 1.00 61.87 O
ATOM 6 C5' G A3055 37.630 64.177 58.432 1.00 61.96 C
ATOM 7 C4' G A3055 37.385 62.872 57.734 1.00 61.40 C
ATOM 8 O4' G A3055 38.655 62.207 57.500 1.00 61.04 O
ATOM 9 C3' G A3055 36.548 61.884 58.527 1.00 60.99 C
ATOM 10 O3' G A3055 35.860 61.039 57.627 1.00 60.68 O
ATOM 11 C2' G A3055 37.605 61.062 59.204 1.00 60.55 C
ATOM 12 O2' G A3055 37.151 59.811 59.646 1.00 60.02 O
ATOM 13 C1' G A3055 38.579 60.925 58.061 1.00 60.47 C
ATOM 14 N9 G A3055 39.907 60.432 58.445 1.00 60.18 N
ATOM 15 C8 G A3055 40.586 60.494 59.645 1.00 60.16 C
ATOM 16 N7 G A3055 41.716 59.833 59.626 1.00 59.84 N
ATOM 17 C5 G A3055 41.735 59.269 58.356 1.00 59.62 C
ATOM 18 C6 G A3055 42.665 58.418 57.730 1.00 59.24 C
ATOM 19 O6 G A3055 43.723 57.958 58.181 1.00 59.01 O
ATOM 20 N1 G A3055 42.263 58.090 56.442 1.00 59.16 N
ATOM 21 C2 G A3055 41.141 58.504 55.819 1.00 59.39 C
ATOM 22 N2 G A3055 40.962 58.078 54.564 1.00 59.28 N
ATOM 23 N3 G A3055 40.284 59.281 56.393 1.00 59.73 N
ATOM 24 C4 G A3055 40.635 59.611 57.633 1.00 59.82 C
ATOM 25 P U A3056 34.513 61.524 56.914 1.00 56.55 P
ATOM 26 OP1 U A3056 34.298 62.970 57.292 1.00 57.20 O
ATOM 27 OP2 U A3056 33.458 60.514 57.239 1.00 56.17 O
ATOM 28 O5' U A3056 34.903 61.433 55.392 1.00 56.55 O
TER
ATOM 1 O3' U B3053 44.983 65.954 63.232 1.00 65.51 O
ATOM 2 P U B3054 43.644 65.075 63.342 1.00 62.57 P
ATOM 3 OP1 U B3054 42.699 65.851 64.173 1.00 62.97 O
ATOM 4 OP2 U B3054 44.019 63.714 63.776 1.00 61.95 O
ATOM 5 O5' U B3054 43.130 65.042 61.848 1.00 62.56 O
ATOM 6 C5' U B3054 42.328 66.098 61.350 1.00 63.07 C
ATOM 7 C4' U B3054 41.963 65.868 59.913 1.00 62.99 C
ATOM 8 O4' U B3054 43.093 65.346 59.220 1.00 62.72 O
ATOM 9 C3' U B3054 40.891 64.847 59.658 1.00 62.56 C
ATOM 10 O3' U B3054 39.619 65.392 59.784 1.00 62.86 O
ATOM 11 C2' U B3054 41.176 64.380 58.249 1.00 62.35 C
ATOM 12 O2' U B3054 40.528 65.219 57.312 1.00 62.79 O
ATOM 13 C1' U B3054 42.669 64.594 58.133 1.00 62.40 C
ATOM 14 N1 U B3054 43.413 63.366 58.127 1.00 61.82 N
ATOM 15 C2 U B3054 43.308 62.666 56.964 1.00 61.54 C
ATOM 16 O2 U B3054 42.580 62.979 56.028 1.00 61.73 O
ATOM 17 N3 U B3054 44.080 61.566 56.972 1.00 61.04 N
ATOM 18 C4 U B3054 44.886 61.137 57.973 1.00 60.81 C
ATOM 19 O4 U B3054 45.472 60.087 57.735 1.00 60.35 O
ATOM 20 C5 U B3054 44.955 61.945 59.154 1.00 61.14 C
ATOM 21 C6 U B3054 44.230 63.048 59.183 1.00 61.64 C
ATOM 22 P G B3055 38.591 64.746 60.803 1.00 62.13 P
ATOM 23 OP1 G B3055 37.943 65.888 61.516 1.00 62.69 O
ATOM 24 OP2 G B3055 39.324 63.718 61.596 1.00 61.63 O
ATOM 25 O5' G B3055 37.546 64.030 59.843 1.00 61.87 O
TER
Atoms:
OP1: (37.943,65.888,61.516)
OP2: (39.324,63.718,61.596)
C3': (36.548,61.884,58.527)
C1': (38.579,60.925,58.061)
C5': (37.630,64.177,58.432)
O6: (43.723,57.958,58.181)
O4': (38.655,62.207,57.500)
C8: (40.586,60.494,59.645)
C2: (41.141,58.504,55.819)
C6: (42.665,58.418,57.730)
C5: (41.735,59.269,58.356)
C4: (40.635,59.611,57.633)
P: (38.591,64.746,60.803)
C4': (37.385,62.872,57.734)
C2': (37.605,61.062,59.204)
O2': (37.151,59.811,59.646)
N1: (42.263,58.090,56.442)
N2: (40.962,58.078,54.564)
N3: (40.284,59.281,56.393)
N7: (41.716,59.833,59.626)
N9: (39.907,60.432,58.445)
O5': (37.546,64.030,59.843)
O3': (35.860,61.039,57.627)
OP2: (39.324,63.718,61.596)
C3': (36.548,61.884,58.527)
C1': (38.579,60.925,58.061)
C5': (37.630,64.177,58.432)
O6: (43.723,57.958,58.181)
O4': (38.655,62.207,57.500)
C8: (40.586,60.494,59.645)
C2: (41.141,58.504,55.819)
C6: (42.665,58.418,57.730)
C5: (41.735,59.269,58.356)
C4: (40.635,59.611,57.633)
P: (38.591,64.746,60.803)
C4': (37.385,62.872,57.734)
C2': (37.605,61.062,59.204)
O2': (37.151,59.811,59.646)
N1: (42.263,58.090,56.442)
N2: (40.962,58.078,54.564)
N3: (40.284,59.281,56.393)
N7: (41.716,59.833,59.626)
N9: (39.907,60.432,58.445)
O5': (37.546,64.030,59.843)
O3': (35.860,61.039,57.627)
C4: (44.886,61.137,57.973)
N3: (44.080,61.566,56.972)
OP1: (42.699,65.851,64.173)
OP2: (44.019,63.714,63.776)
C2: (43.308,62.666,56.964)
C1': (42.669,64.594,58.133)
C3': (40.891,64.847,59.658)
O5': (43.130,65.042,61.848)
O4': (43.093,65.346,59.220)
C5': (42.328,66.098,61.350)
P: (43.644,65.075,63.342)
C4': (41.963,65.868,59.913)
C2': (41.176,64.380,58.249)
O2': (40.528,65.219,57.312)
N1: (43.413,63.366,58.127)
O4: (45.472,60.087,57.735)
O2: (42.580,62.979,56.028)
C6: (44.230,63.048,59.183)
C5: (44.955,61.945,59.154)
O3': (39.619,65.392,59.784)
N3: (44.080,61.566,56.972)
OP1: (42.699,65.851,64.173)
OP2: (44.019,63.714,63.776)
C2: (43.308,62.666,56.964)
C1': (42.669,64.594,58.133)
C3': (40.891,64.847,59.658)
O5': (43.130,65.042,61.848)
O4': (43.093,65.346,59.220)
C5': (42.328,66.098,61.350)
P: (43.644,65.075,63.342)
C4': (41.963,65.868,59.913)
C2': (41.176,64.380,58.249)
O2': (40.528,65.219,57.312)
N1: (43.413,63.366,58.127)
O4: (45.472,60.087,57.735)
O2: (42.580,62.979,56.028)
C6: (44.230,63.048,59.183)
C5: (44.955,61.945,59.154)
O3': (39.619,65.392,59.784)
Image (generated by PyMOL):