Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1821:A1820
Extra
PDB:
ATOM 1 O3' U A1820 -66.010 -15.496 9.748 1.00 0.01 O
ATOM 2 P G A1821 -64.968 -15.989 8.626 1.00 0.01 P
ATOM 3 OP1 G A1821 -65.524 -15.617 7.347 1.00 0.01 O
ATOM 4 OP2 G A1821 -64.690 -17.405 8.870 1.00 0.01 O
ATOM 5 O5' G A1821 -63.679 -15.116 8.911 1.00 0.01 O
ATOM 6 C5' G A1821 -63.419 -13.931 8.159 1.00 0.00 C
ATOM 7 C4' G A1821 -61.993 -13.476 8.332 1.00 0.01 C
ATOM 8 O4' G A1821 -61.582 -13.786 9.685 1.00 0.01 O
ATOM 9 C3' G A1821 -60.973 -14.170 7.426 1.00 0.01 C
ATOM 10 O3' G A1821 -59.839 -13.327 7.216 1.00 0.01 O
ATOM 11 C2' G A1821 -60.541 -15.323 8.283 1.00 0.01 C
ATOM 12 O2' G A1821 -59.298 -15.835 7.931 1.00 0.01 O
ATOM 13 C1' G A1821 -60.496 -14.670 9.652 1.00 0.01 C
ATOM 14 N9 G A1821 -60.646 -15.604 10.743 1.00 0.01 N
ATOM 15 C8 G A1821 -61.755 -16.376 11.009 1.00 0.01 C
ATOM 16 N7 G A1821 -61.608 -17.163 12.051 1.00 0.01 N
ATOM 17 C5 G A1821 -60.326 -16.874 12.479 1.00 0.01 C
ATOM 18 C6 G A1821 -59.610 -17.402 13.543 1.00 0.01 C
ATOM 19 O6 G A1821 -59.965 -18.254 14.354 1.00 0.01 O
ATOM 20 N1 G A1821 -58.356 -16.856 13.651 1.00 0.01 N
ATOM 21 C2 G A1821 -57.825 -15.930 12.840 1.00 0.01 C
ATOM 22 N2 G A1821 -56.590 -15.586 13.179 1.00 0.01 N
ATOM 23 N3 G A1821 -58.464 -15.407 11.818 1.00 0.01 N
ATOM 24 C4 G A1821 -59.711 -15.920 11.700 1.00 0.01 C
ATOM 25 P A A1822 -59.763 -12.306 5.983 1.00 0.01 P
ATOM 26 OP1 A A1822 -61.136 -11.829 5.691 1.00 0.01 O
ATOM 27 OP2 A A1822 -59.001 -12.988 4.917 1.00 0.01 O
ATOM 28 O5' A A1822 -58.914 -11.112 6.585 1.00 0.01 O
TER
ATOM 1 O3' G B1819 -67.836 -17.982 15.321 1.00 0.01 O
ATOM 2 P U B1820 -67.121 -18.254 13.924 1.00 0.01 P
ATOM 3 OP1 U B1820 -68.129 -18.813 13.014 1.00 0.01 O
ATOM 4 OP2 U B1820 -65.934 -19.043 14.200 1.00 0.01 O
ATOM 5 O5' U B1820 -66.700 -16.789 13.466 1.00 0.01 O
ATOM 6 C5' U B1820 -67.510 -16.022 12.586 1.00 0.01 C
ATOM 7 C4' U B1820 -66.733 -14.879 11.985 1.00 0.01 C
ATOM 8 O4' U B1820 -66.098 -14.143 13.045 1.00 0.01 O
ATOM 9 C3' U B1820 -65.588 -15.263 11.066 1.00 0.01 C
ATOM 10 O3' U B1820 -66.010 -15.496 9.748 1.00 0.01 O
ATOM 11 C2' U B1820 -64.668 -14.082 11.175 1.00 0.01 C
ATOM 12 O2' U B1820 -65.131 -13.036 10.349 1.00 0.01 O
ATOM 13 C1' U B1820 -64.849 -13.664 12.626 1.00 0.01 C
ATOM 14 N1 U B1820 -63.784 -14.211 13.516 1.00 0.26 N
ATOM 15 C2 U B1820 -62.535 -13.720 13.364 1.00 0.26 C
ATOM 16 O2 U B1820 -62.283 -12.891 12.545 1.00 0.26 O
ATOM 17 N3 U B1820 -61.556 -14.208 14.138 1.00 0.26 N
ATOM 18 C4 U B1820 -61.670 -15.136 15.114 1.00 0.26 C
ATOM 19 O4 U B1820 -60.664 -15.463 15.761 1.00 0.26 O
ATOM 20 C5 U B1820 -62.998 -15.620 15.269 1.00 0.26 C
ATOM 21 C6 U B1820 -63.973 -15.146 14.479 1.00 0.26 C
ATOM 22 P G B1821 -64.968 -15.989 8.626 1.00 0.01 P
ATOM 23 OP1 G B1821 -65.524 -15.617 7.347 1.00 0.01 O
ATOM 24 OP2 G B1821 -64.690 -17.405 8.870 1.00 0.01 O
ATOM 25 O5' G B1821 -63.679 -15.116 8.911 1.00 0.01 O
TER
ATOM 2 P G A1821 -64.968 -15.989 8.626 1.00 0.01 P
ATOM 3 OP1 G A1821 -65.524 -15.617 7.347 1.00 0.01 O
ATOM 4 OP2 G A1821 -64.690 -17.405 8.870 1.00 0.01 O
ATOM 5 O5' G A1821 -63.679 -15.116 8.911 1.00 0.01 O
ATOM 6 C5' G A1821 -63.419 -13.931 8.159 1.00 0.00 C
ATOM 7 C4' G A1821 -61.993 -13.476 8.332 1.00 0.01 C
ATOM 8 O4' G A1821 -61.582 -13.786 9.685 1.00 0.01 O
ATOM 9 C3' G A1821 -60.973 -14.170 7.426 1.00 0.01 C
ATOM 10 O3' G A1821 -59.839 -13.327 7.216 1.00 0.01 O
ATOM 11 C2' G A1821 -60.541 -15.323 8.283 1.00 0.01 C
ATOM 12 O2' G A1821 -59.298 -15.835 7.931 1.00 0.01 O
ATOM 13 C1' G A1821 -60.496 -14.670 9.652 1.00 0.01 C
ATOM 14 N9 G A1821 -60.646 -15.604 10.743 1.00 0.01 N
ATOM 15 C8 G A1821 -61.755 -16.376 11.009 1.00 0.01 C
ATOM 16 N7 G A1821 -61.608 -17.163 12.051 1.00 0.01 N
ATOM 17 C5 G A1821 -60.326 -16.874 12.479 1.00 0.01 C
ATOM 18 C6 G A1821 -59.610 -17.402 13.543 1.00 0.01 C
ATOM 19 O6 G A1821 -59.965 -18.254 14.354 1.00 0.01 O
ATOM 20 N1 G A1821 -58.356 -16.856 13.651 1.00 0.01 N
ATOM 21 C2 G A1821 -57.825 -15.930 12.840 1.00 0.01 C
ATOM 22 N2 G A1821 -56.590 -15.586 13.179 1.00 0.01 N
ATOM 23 N3 G A1821 -58.464 -15.407 11.818 1.00 0.01 N
ATOM 24 C4 G A1821 -59.711 -15.920 11.700 1.00 0.01 C
ATOM 25 P A A1822 -59.763 -12.306 5.983 1.00 0.01 P
ATOM 26 OP1 A A1822 -61.136 -11.829 5.691 1.00 0.01 O
ATOM 27 OP2 A A1822 -59.001 -12.988 4.917 1.00 0.01 O
ATOM 28 O5' A A1822 -58.914 -11.112 6.585 1.00 0.01 O
TER
ATOM 1 O3' G B1819 -67.836 -17.982 15.321 1.00 0.01 O
ATOM 2 P U B1820 -67.121 -18.254 13.924 1.00 0.01 P
ATOM 3 OP1 U B1820 -68.129 -18.813 13.014 1.00 0.01 O
ATOM 4 OP2 U B1820 -65.934 -19.043 14.200 1.00 0.01 O
ATOM 5 O5' U B1820 -66.700 -16.789 13.466 1.00 0.01 O
ATOM 6 C5' U B1820 -67.510 -16.022 12.586 1.00 0.01 C
ATOM 7 C4' U B1820 -66.733 -14.879 11.985 1.00 0.01 C
ATOM 8 O4' U B1820 -66.098 -14.143 13.045 1.00 0.01 O
ATOM 9 C3' U B1820 -65.588 -15.263 11.066 1.00 0.01 C
ATOM 10 O3' U B1820 -66.010 -15.496 9.748 1.00 0.01 O
ATOM 11 C2' U B1820 -64.668 -14.082 11.175 1.00 0.01 C
ATOM 12 O2' U B1820 -65.131 -13.036 10.349 1.00 0.01 O
ATOM 13 C1' U B1820 -64.849 -13.664 12.626 1.00 0.01 C
ATOM 14 N1 U B1820 -63.784 -14.211 13.516 1.00 0.26 N
ATOM 15 C2 U B1820 -62.535 -13.720 13.364 1.00 0.26 C
ATOM 16 O2 U B1820 -62.283 -12.891 12.545 1.00 0.26 O
ATOM 17 N3 U B1820 -61.556 -14.208 14.138 1.00 0.26 N
ATOM 18 C4 U B1820 -61.670 -15.136 15.114 1.00 0.26 C
ATOM 19 O4 U B1820 -60.664 -15.463 15.761 1.00 0.26 O
ATOM 20 C5 U B1820 -62.998 -15.620 15.269 1.00 0.26 C
ATOM 21 C6 U B1820 -63.973 -15.146 14.479 1.00 0.26 C
ATOM 22 P G B1821 -64.968 -15.989 8.626 1.00 0.01 P
ATOM 23 OP1 G B1821 -65.524 -15.617 7.347 1.00 0.01 O
ATOM 24 OP2 G B1821 -64.690 -17.405 8.870 1.00 0.01 O
ATOM 25 O5' G B1821 -63.679 -15.116 8.911 1.00 0.01 O
TER
Atoms:
OP1: (-65.524,-15.617,7.347)
OP2: (-64.690,-17.405,8.870)
C3': (-60.973,-14.170,7.426)
C1': (-60.496,-14.670,9.652)
C5': (-63.419,-13.931,8.159)
O6: (-59.965,-18.254,14.354)
O4': (-61.582,-13.786,9.685)
C8: (-61.755,-16.376,11.009)
C2: (-57.825,-15.930,12.840)
C6: (-59.610,-17.402,13.543)
C5: (-60.326,-16.874,12.479)
C4: (-59.711,-15.920,11.700)
P: (-64.968,-15.989,8.626)
C4': (-61.993,-13.476,8.332)
C2': (-60.541,-15.323,8.283)
O2': (-59.298,-15.835,7.931)
N1: (-58.356,-16.856,13.651)
N2: (-56.590,-15.586,13.179)
N3: (-58.464,-15.407,11.818)
N7: (-61.608,-17.163,12.051)
N9: (-60.646,-15.604,10.743)
O5': (-63.679,-15.116,8.911)
O3': (-59.839,-13.327,7.216)
OP2: (-64.690,-17.405,8.870)
C3': (-60.973,-14.170,7.426)
C1': (-60.496,-14.670,9.652)
C5': (-63.419,-13.931,8.159)
O6: (-59.965,-18.254,14.354)
O4': (-61.582,-13.786,9.685)
C8: (-61.755,-16.376,11.009)
C2: (-57.825,-15.930,12.840)
C6: (-59.610,-17.402,13.543)
C5: (-60.326,-16.874,12.479)
C4: (-59.711,-15.920,11.700)
P: (-64.968,-15.989,8.626)
C4': (-61.993,-13.476,8.332)
C2': (-60.541,-15.323,8.283)
O2': (-59.298,-15.835,7.931)
N1: (-58.356,-16.856,13.651)
N2: (-56.590,-15.586,13.179)
N3: (-58.464,-15.407,11.818)
N7: (-61.608,-17.163,12.051)
N9: (-60.646,-15.604,10.743)
O5': (-63.679,-15.116,8.911)
O3': (-59.839,-13.327,7.216)
C4: (-61.670,-15.136,15.114)
N3: (-61.556,-14.208,14.138)
OP1: (-68.129,-18.813,13.014)
OP2: (-65.934,-19.043,14.200)
C2: (-62.535,-13.720,13.364)
C1': (-64.849,-13.664,12.626)
C3': (-65.588,-15.263,11.066)
O5': (-66.700,-16.789,13.466)
O4': (-66.098,-14.143,13.045)
C5': (-67.510,-16.022,12.586)
P: (-67.121,-18.254,13.924)
C4': (-66.733,-14.879,11.985)
C2': (-64.668,-14.082,11.175)
O2': (-65.131,-13.036,10.349)
N1: (-63.784,-14.211,13.516)
O4: (-60.664,-15.463,15.761)
O2: (-62.283,-12.891,12.545)
C6: (-63.973,-15.146,14.479)
C5: (-62.998,-15.620,15.269)
O3': (-66.010,-15.496,9.748)
N3: (-61.556,-14.208,14.138)
OP1: (-68.129,-18.813,13.014)
OP2: (-65.934,-19.043,14.200)
C2: (-62.535,-13.720,13.364)
C1': (-64.849,-13.664,12.626)
C3': (-65.588,-15.263,11.066)
O5': (-66.700,-16.789,13.466)
O4': (-66.098,-14.143,13.045)
C5': (-67.510,-16.022,12.586)
P: (-67.121,-18.254,13.924)
C4': (-66.733,-14.879,11.985)
C2': (-64.668,-14.082,11.175)
O2': (-65.131,-13.036,10.349)
N1: (-63.784,-14.211,13.516)
O4: (-60.664,-15.463,15.761)
O2: (-62.283,-12.891,12.545)
C6: (-63.973,-15.146,14.479)
C5: (-62.998,-15.620,15.269)
O3': (-66.010,-15.496,9.748)
Image (generated by PyMOL):