Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0556:0555
Extra
PDB:
ATOM 1 O3' U A 555 4.263 92.120 107.874 1.00 44.24 O
ATOM 2 P G A 556 3.748 91.589 109.304 1.00 44.08 P
ATOM 3 OP1 G A 556 4.732 92.063 110.315 1.00 46.41 O
ATOM 4 OP2 G A 556 3.466 90.142 109.185 1.00 41.64 O
ATOM 5 O5' G A 556 2.401 92.401 109.556 1.00 42.89 O
ATOM 6 C5' G A 556 2.436 93.745 110.073 1.00 44.74 C
ATOM 7 C4' G A 556 1.032 94.253 110.299 1.00 49.53 C
ATOM 8 O4' G A 556 0.343 94.398 109.022 1.00 49.98 O
ATOM 9 C3' G A 556 0.126 93.322 111.092 1.00 50.77 C
ATOM 10 O3' G A 556 0.342 93.392 112.496 1.00 52.24 O
ATOM 11 C2' G A 556 -1.257 93.792 110.666 1.00 49.42 C
ATOM 12 O2' G A 556 -1.622 95.002 111.301 1.00 46.72 O
ATOM 13 C1' G A 556 -1.028 94.045 109.173 1.00 48.82 C
ATOM 14 N9 G A 556 -1.280 92.854 108.366 1.00 46.90 N
ATOM 15 C8 G A 556 -0.364 91.898 108.004 1.00 46.92 C
ATOM 16 N7 G A 556 -0.881 90.936 107.289 1.00 47.35 N
ATOM 17 C5 G A 556 -2.220 91.275 107.173 1.00 46.20 C
ATOM 18 C6 G A 556 -3.274 90.605 106.516 1.00 46.15 C
ATOM 19 O6 G A 556 -3.234 89.536 105.901 1.00 46.56 O
ATOM 20 N1 G A 556 -4.473 91.299 106.629 1.00 43.05 N
ATOM 21 C2 G A 556 -4.636 92.482 107.301 1.00 45.89 C
ATOM 22 N2 G A 556 -5.874 93.000 107.297 1.00 45.46 N
ATOM 23 N3 G A 556 -3.658 93.115 107.931 1.00 47.68 N
ATOM 24 C4 G A 556 -2.484 92.459 107.825 1.00 47.06 C
ATOM 25 P A A 557 -0.115 92.161 113.427 1.00 55.50 P
ATOM 26 OP1 A A 557 0.515 92.370 114.757 1.00 55.56 O
ATOM 27 OP2 A A 557 0.098 90.873 112.710 1.00 51.16 O
ATOM 28 O5' A A 557 -1.682 92.396 113.555 1.00 55.47 O
TER
ATOM 1 O3' A B 554 3.701 89.418 102.316 1.00 46.08 O
ATOM 2 P U B 555 3.082 88.905 103.712 1.00 45.27 P
ATOM 3 OP1 U B 555 3.997 87.863 104.230 1.00 41.75 O
ATOM 4 OP2 U B 555 1.653 88.576 103.482 1.00 45.33 O
ATOM 5 O5' U B 555 3.141 90.190 104.653 1.00 42.79 O
ATOM 6 C5' U B 555 4.385 90.880 104.896 1.00 41.22 C
ATOM 7 C4' U B 555 4.116 92.240 105.475 1.00 40.19 C
ATOM 8 O4' U B 555 3.272 92.972 104.554 1.00 42.97 O
ATOM 9 C3' U B 555 3.355 92.247 106.785 1.00 41.09 C
ATOM 10 O3' U B 555 4.263 92.120 107.874 1.00 44.24 O
ATOM 11 C2' U B 555 2.664 93.604 106.764 1.00 40.38 C
ATOM 12 O2' U B 555 3.484 94.666 107.192 1.00 37.74 O
ATOM 13 C1' U B 555 2.351 93.765 105.274 1.00 42.68 C
ATOM 14 N1 U B 555 0.993 93.342 104.897 1.00 46.07 N
ATOM 15 C2 U B 555 -0.041 94.240 105.106 1.00 46.28 C
ATOM 16 O2 U B 555 0.129 95.354 105.585 1.00 45.93 O
ATOM 17 N3 U B 555 -1.282 93.783 104.737 1.00 46.88 N
ATOM 18 C4 U B 555 -1.589 92.549 104.204 1.00 47.48 C
ATOM 19 O4 U B 555 -2.762 92.283 103.938 1.00 50.34 O
ATOM 20 C5 U B 555 -0.466 91.678 104.014 1.00 46.44 C
ATOM 21 C6 U B 555 0.752 92.092 104.355 1.00 45.45 C
ATOM 22 P G B 556 3.748 91.589 109.304 1.00 44.08 P
ATOM 23 OP1 G B 556 4.732 92.063 110.315 1.00 46.41 O
ATOM 24 OP2 G B 556 3.466 90.142 109.185 1.00 41.64 O
ATOM 25 O5' G B 556 2.401 92.401 109.556 1.00 42.89 O
TER
ATOM 2 P G A 556 3.748 91.589 109.304 1.00 44.08 P
ATOM 3 OP1 G A 556 4.732 92.063 110.315 1.00 46.41 O
ATOM 4 OP2 G A 556 3.466 90.142 109.185 1.00 41.64 O
ATOM 5 O5' G A 556 2.401 92.401 109.556 1.00 42.89 O
ATOM 6 C5' G A 556 2.436 93.745 110.073 1.00 44.74 C
ATOM 7 C4' G A 556 1.032 94.253 110.299 1.00 49.53 C
ATOM 8 O4' G A 556 0.343 94.398 109.022 1.00 49.98 O
ATOM 9 C3' G A 556 0.126 93.322 111.092 1.00 50.77 C
ATOM 10 O3' G A 556 0.342 93.392 112.496 1.00 52.24 O
ATOM 11 C2' G A 556 -1.257 93.792 110.666 1.00 49.42 C
ATOM 12 O2' G A 556 -1.622 95.002 111.301 1.00 46.72 O
ATOM 13 C1' G A 556 -1.028 94.045 109.173 1.00 48.82 C
ATOM 14 N9 G A 556 -1.280 92.854 108.366 1.00 46.90 N
ATOM 15 C8 G A 556 -0.364 91.898 108.004 1.00 46.92 C
ATOM 16 N7 G A 556 -0.881 90.936 107.289 1.00 47.35 N
ATOM 17 C5 G A 556 -2.220 91.275 107.173 1.00 46.20 C
ATOM 18 C6 G A 556 -3.274 90.605 106.516 1.00 46.15 C
ATOM 19 O6 G A 556 -3.234 89.536 105.901 1.00 46.56 O
ATOM 20 N1 G A 556 -4.473 91.299 106.629 1.00 43.05 N
ATOM 21 C2 G A 556 -4.636 92.482 107.301 1.00 45.89 C
ATOM 22 N2 G A 556 -5.874 93.000 107.297 1.00 45.46 N
ATOM 23 N3 G A 556 -3.658 93.115 107.931 1.00 47.68 N
ATOM 24 C4 G A 556 -2.484 92.459 107.825 1.00 47.06 C
ATOM 25 P A A 557 -0.115 92.161 113.427 1.00 55.50 P
ATOM 26 OP1 A A 557 0.515 92.370 114.757 1.00 55.56 O
ATOM 27 OP2 A A 557 0.098 90.873 112.710 1.00 51.16 O
ATOM 28 O5' A A 557 -1.682 92.396 113.555 1.00 55.47 O
TER
ATOM 1 O3' A B 554 3.701 89.418 102.316 1.00 46.08 O
ATOM 2 P U B 555 3.082 88.905 103.712 1.00 45.27 P
ATOM 3 OP1 U B 555 3.997 87.863 104.230 1.00 41.75 O
ATOM 4 OP2 U B 555 1.653 88.576 103.482 1.00 45.33 O
ATOM 5 O5' U B 555 3.141 90.190 104.653 1.00 42.79 O
ATOM 6 C5' U B 555 4.385 90.880 104.896 1.00 41.22 C
ATOM 7 C4' U B 555 4.116 92.240 105.475 1.00 40.19 C
ATOM 8 O4' U B 555 3.272 92.972 104.554 1.00 42.97 O
ATOM 9 C3' U B 555 3.355 92.247 106.785 1.00 41.09 C
ATOM 10 O3' U B 555 4.263 92.120 107.874 1.00 44.24 O
ATOM 11 C2' U B 555 2.664 93.604 106.764 1.00 40.38 C
ATOM 12 O2' U B 555 3.484 94.666 107.192 1.00 37.74 O
ATOM 13 C1' U B 555 2.351 93.765 105.274 1.00 42.68 C
ATOM 14 N1 U B 555 0.993 93.342 104.897 1.00 46.07 N
ATOM 15 C2 U B 555 -0.041 94.240 105.106 1.00 46.28 C
ATOM 16 O2 U B 555 0.129 95.354 105.585 1.00 45.93 O
ATOM 17 N3 U B 555 -1.282 93.783 104.737 1.00 46.88 N
ATOM 18 C4 U B 555 -1.589 92.549 104.204 1.00 47.48 C
ATOM 19 O4 U B 555 -2.762 92.283 103.938 1.00 50.34 O
ATOM 20 C5 U B 555 -0.466 91.678 104.014 1.00 46.44 C
ATOM 21 C6 U B 555 0.752 92.092 104.355 1.00 45.45 C
ATOM 22 P G B 556 3.748 91.589 109.304 1.00 44.08 P
ATOM 23 OP1 G B 556 4.732 92.063 110.315 1.00 46.41 O
ATOM 24 OP2 G B 556 3.466 90.142 109.185 1.00 41.64 O
ATOM 25 O5' G B 556 2.401 92.401 109.556 1.00 42.89 O
TER
Atoms:
OP1: (4.732,92.063,110.315)
OP2: (3.466,90.142,109.185)
C3': (0.126,93.322,111.092)
C1': (-1.028,94.045,109.173)
C5': (2.436,93.745,110.073)
O6: (-3.234,89.536,105.901)
O4': (0.343,94.398,109.022)
C8: (-0.364,91.898,108.004)
C2: (-4.636,92.482,107.301)
C6: (-3.274,90.605,106.516)
C5: (-2.220,91.275,107.173)
C4: (-2.484,92.459,107.825)
P: (3.748,91.589,109.304)
C4': (1.032,94.253,110.299)
C2': (-1.257,93.792,110.666)
O2': (-1.622,95.002,111.301)
N1: (-4.473,91.299,106.629)
N2: (-5.874,93.000,107.297)
N3: (-3.658,93.115,107.931)
N7: (-0.881,90.936,107.289)
N9: (-1.280,92.854,108.366)
O5': (2.401,92.401,109.556)
O3': (0.342,93.392,112.496)
OP2: (3.466,90.142,109.185)
C3': (0.126,93.322,111.092)
C1': (-1.028,94.045,109.173)
C5': (2.436,93.745,110.073)
O6: (-3.234,89.536,105.901)
O4': (0.343,94.398,109.022)
C8: (-0.364,91.898,108.004)
C2: (-4.636,92.482,107.301)
C6: (-3.274,90.605,106.516)
C5: (-2.220,91.275,107.173)
C4: (-2.484,92.459,107.825)
P: (3.748,91.589,109.304)
C4': (1.032,94.253,110.299)
C2': (-1.257,93.792,110.666)
O2': (-1.622,95.002,111.301)
N1: (-4.473,91.299,106.629)
N2: (-5.874,93.000,107.297)
N3: (-3.658,93.115,107.931)
N7: (-0.881,90.936,107.289)
N9: (-1.280,92.854,108.366)
O5': (2.401,92.401,109.556)
O3': (0.342,93.392,112.496)
C4: (-1.589,92.549,104.204)
N3: (-1.282,93.783,104.737)
OP1: (3.997,87.863,104.230)
OP2: (1.653,88.576,103.482)
C2: (-0.041,94.240,105.106)
C1': (2.351,93.765,105.274)
C3': (3.355,92.247,106.785)
O5': (3.141,90.190,104.653)
O4': (3.272,92.972,104.554)
C5': (4.385,90.880,104.896)
P: (3.082,88.905,103.712)
C4': (4.116,92.240,105.475)
C2': (2.664,93.604,106.764)
O2': (3.484,94.666,107.192)
N1: (0.993,93.342,104.897)
O4: (-2.762,92.283,103.938)
O2: (0.129,95.354,105.585)
C6: (0.752,92.092,104.355)
C5: (-0.466,91.678,104.014)
O3': (4.263,92.120,107.874)
N3: (-1.282,93.783,104.737)
OP1: (3.997,87.863,104.230)
OP2: (1.653,88.576,103.482)
C2: (-0.041,94.240,105.106)
C1': (2.351,93.765,105.274)
C3': (3.355,92.247,106.785)
O5': (3.141,90.190,104.653)
O4': (3.272,92.972,104.554)
C5': (4.385,90.880,104.896)
P: (3.082,88.905,103.712)
C4': (4.116,92.240,105.475)
C2': (2.664,93.604,106.764)
O2': (3.484,94.666,107.192)
N1: (0.993,93.342,104.897)
O4: (-2.762,92.283,103.938)
O2: (0.129,95.354,105.585)
C6: (0.752,92.092,104.355)
C5: (-0.466,91.678,104.014)
O3': (4.263,92.120,107.874)
Image (generated by PyMOL):