Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0230:0257
Extra
PDB:
ATOM 1 O3' A A 229 89.122 110.768 6.684 1.00 50.47 O
ATOM 2 P A A 230 89.558 110.849 5.136 1.00 49.59 P
ATOM 3 OP1 A A 230 90.738 111.744 5.044 1.00 51.24 O
ATOM 4 OP2 A A 230 88.341 111.163 4.345 1.00 48.27 O
ATOM 5 O5' A A 230 90.000 109.354 4.800 1.00 47.58 O
ATOM 6 C5' A A 230 91.068 108.713 5.519 1.00 47.49 C
ATOM 7 C4' A A 230 91.077 107.224 5.234 1.00 49.31 C
ATOM 8 O4' A A 230 89.840 106.628 5.706 1.00 50.65 O
ATOM 9 C3' A A 230 91.116 106.827 3.771 1.00 50.99 C
ATOM 10 O3' A A 230 92.427 106.906 3.228 1.00 52.11 O
ATOM 11 C2' A A 230 90.561 105.405 3.799 1.00 50.55 C
ATOM 12 O2' A A 230 91.507 104.433 4.210 1.00 49.90 O
ATOM 13 C1' A A 230 89.477 105.535 4.869 1.00 49.27 C
ATOM 14 N9 A A 230 88.136 105.780 4.330 1.00 48.28 N
ATOM 15 C8 A A 230 87.551 106.986 4.028 1.00 47.02 C
ATOM 16 N7 A A 230 86.331 106.881 3.560 1.00 46.70 N
ATOM 17 C5 A A 230 86.094 105.510 3.548 1.00 47.52 C
ATOM 18 C6 A A 230 84.975 104.741 3.160 1.00 46.93 C
ATOM 19 N6 A A 230 83.841 105.266 2.680 1.00 46.87 N
ATOM 20 N1 A A 230 85.062 103.398 3.284 1.00 46.53 N
ATOM 21 C2 A A 230 86.195 102.871 3.765 1.00 46.30 C
ATOM 22 N3 A A 230 87.312 103.485 4.158 1.00 48.75 N
ATOM 23 C4 A A 230 87.196 104.820 4.023 1.00 48.37 C
ATOM 24 P A A 231 92.619 107.253 1.667 1.00 53.69 P
ATOM 25 OP1 A A 231 94.068 107.531 1.469 1.00 51.98 O
ATOM 26 OP2 A A 231 91.609 108.272 1.267 1.00 48.64 O
ATOM 27 O5' A A 231 92.240 105.893 0.926 1.00 52.09 O
TER
ATOM 1 O3' U B 256 79.801 107.615 -4.940 1.00 59.24 O
ATOM 2 P G B 257 78.576 107.152 -4.007 1.00 60.89 P
ATOM 3 OP1 G B 257 77.844 106.085 -4.738 1.00 60.81 O
ATOM 4 OP2 G B 257 77.842 108.364 -3.561 1.00 61.20 O
ATOM 5 O5' G B 257 79.284 106.492 -2.745 1.00 58.17 O
ATOM 6 C5' G B 257 80.004 105.256 -2.864 1.00 57.46 C
ATOM 7 C4' G B 257 80.565 104.866 -1.523 1.00 58.45 C
ATOM 8 O4' G B 257 81.555 105.846 -1.116 1.00 58.86 O
ATOM 9 C3' G B 257 79.542 104.866 -0.400 1.00 58.46 C
ATOM 10 O3' G B 257 78.847 103.625 -0.369 1.00 59.56 O
ATOM 11 C2' G B 257 80.406 105.111 0.829 1.00 57.38 C
ATOM 12 O2' G B 257 81.076 103.941 1.257 1.00 57.97 O
ATOM 13 C1' G B 257 81.445 106.091 0.273 1.00 56.34 C
ATOM 14 N9 G B 257 81.127 107.506 0.450 1.00 52.91 N
ATOM 15 C8 G B 257 80.065 108.197 -0.084 1.00 52.42 C
ATOM 16 N7 G B 257 80.059 109.461 0.243 1.00 50.84 N
ATOM 17 C5 G B 257 81.180 109.614 1.047 1.00 48.70 C
ATOM 18 C6 G B 257 81.689 110.762 1.702 1.00 46.11 C
ATOM 19 O6 G B 257 81.230 111.914 1.710 1.00 43.64 O
ATOM 20 N1 G B 257 82.852 110.473 2.405 1.00 43.80 N
ATOM 21 C2 G B 257 83.449 109.237 2.474 1.00 46.23 C
ATOM 22 N2 G B 257 84.576 109.151 3.197 1.00 43.23 N
ATOM 23 N3 G B 257 82.978 108.158 1.876 1.00 49.02 N
ATOM 24 C4 G B 257 81.850 108.417 1.183 1.00 50.16 C
ATOM 25 P U B 258 77.363 103.552 0.239 1.00 60.67 P
ATOM 26 OP1 U B 258 76.742 102.276 -0.207 1.00 61.72 O
ATOM 27 OP2 U B 258 76.668 104.836 -0.036 1.00 59.99 O
ATOM 28 O5' U B 258 77.626 103.435 1.802 1.00 62.15 O
TER
ATOM 2 P A A 230 89.558 110.849 5.136 1.00 49.59 P
ATOM 3 OP1 A A 230 90.738 111.744 5.044 1.00 51.24 O
ATOM 4 OP2 A A 230 88.341 111.163 4.345 1.00 48.27 O
ATOM 5 O5' A A 230 90.000 109.354 4.800 1.00 47.58 O
ATOM 6 C5' A A 230 91.068 108.713 5.519 1.00 47.49 C
ATOM 7 C4' A A 230 91.077 107.224 5.234 1.00 49.31 C
ATOM 8 O4' A A 230 89.840 106.628 5.706 1.00 50.65 O
ATOM 9 C3' A A 230 91.116 106.827 3.771 1.00 50.99 C
ATOM 10 O3' A A 230 92.427 106.906 3.228 1.00 52.11 O
ATOM 11 C2' A A 230 90.561 105.405 3.799 1.00 50.55 C
ATOM 12 O2' A A 230 91.507 104.433 4.210 1.00 49.90 O
ATOM 13 C1' A A 230 89.477 105.535 4.869 1.00 49.27 C
ATOM 14 N9 A A 230 88.136 105.780 4.330 1.00 48.28 N
ATOM 15 C8 A A 230 87.551 106.986 4.028 1.00 47.02 C
ATOM 16 N7 A A 230 86.331 106.881 3.560 1.00 46.70 N
ATOM 17 C5 A A 230 86.094 105.510 3.548 1.00 47.52 C
ATOM 18 C6 A A 230 84.975 104.741 3.160 1.00 46.93 C
ATOM 19 N6 A A 230 83.841 105.266 2.680 1.00 46.87 N
ATOM 20 N1 A A 230 85.062 103.398 3.284 1.00 46.53 N
ATOM 21 C2 A A 230 86.195 102.871 3.765 1.00 46.30 C
ATOM 22 N3 A A 230 87.312 103.485 4.158 1.00 48.75 N
ATOM 23 C4 A A 230 87.196 104.820 4.023 1.00 48.37 C
ATOM 24 P A A 231 92.619 107.253 1.667 1.00 53.69 P
ATOM 25 OP1 A A 231 94.068 107.531 1.469 1.00 51.98 O
ATOM 26 OP2 A A 231 91.609 108.272 1.267 1.00 48.64 O
ATOM 27 O5' A A 231 92.240 105.893 0.926 1.00 52.09 O
TER
ATOM 1 O3' U B 256 79.801 107.615 -4.940 1.00 59.24 O
ATOM 2 P G B 257 78.576 107.152 -4.007 1.00 60.89 P
ATOM 3 OP1 G B 257 77.844 106.085 -4.738 1.00 60.81 O
ATOM 4 OP2 G B 257 77.842 108.364 -3.561 1.00 61.20 O
ATOM 5 O5' G B 257 79.284 106.492 -2.745 1.00 58.17 O
ATOM 6 C5' G B 257 80.004 105.256 -2.864 1.00 57.46 C
ATOM 7 C4' G B 257 80.565 104.866 -1.523 1.00 58.45 C
ATOM 8 O4' G B 257 81.555 105.846 -1.116 1.00 58.86 O
ATOM 9 C3' G B 257 79.542 104.866 -0.400 1.00 58.46 C
ATOM 10 O3' G B 257 78.847 103.625 -0.369 1.00 59.56 O
ATOM 11 C2' G B 257 80.406 105.111 0.829 1.00 57.38 C
ATOM 12 O2' G B 257 81.076 103.941 1.257 1.00 57.97 O
ATOM 13 C1' G B 257 81.445 106.091 0.273 1.00 56.34 C
ATOM 14 N9 G B 257 81.127 107.506 0.450 1.00 52.91 N
ATOM 15 C8 G B 257 80.065 108.197 -0.084 1.00 52.42 C
ATOM 16 N7 G B 257 80.059 109.461 0.243 1.00 50.84 N
ATOM 17 C5 G B 257 81.180 109.614 1.047 1.00 48.70 C
ATOM 18 C6 G B 257 81.689 110.762 1.702 1.00 46.11 C
ATOM 19 O6 G B 257 81.230 111.914 1.710 1.00 43.64 O
ATOM 20 N1 G B 257 82.852 110.473 2.405 1.00 43.80 N
ATOM 21 C2 G B 257 83.449 109.237 2.474 1.00 46.23 C
ATOM 22 N2 G B 257 84.576 109.151 3.197 1.00 43.23 N
ATOM 23 N3 G B 257 82.978 108.158 1.876 1.00 49.02 N
ATOM 24 C4 G B 257 81.850 108.417 1.183 1.00 50.16 C
ATOM 25 P U B 258 77.363 103.552 0.239 1.00 60.67 P
ATOM 26 OP1 U B 258 76.742 102.276 -0.207 1.00 61.72 O
ATOM 27 OP2 U B 258 76.668 104.836 -0.036 1.00 59.99 O
ATOM 28 O5' U B 258 77.626 103.435 1.802 1.00 62.15 O
TER
Atoms:
OP1: (90.738,111.744,5.044)
OP2: (88.341,111.163,4.345)
C3': (91.116,106.827,3.771)
C1': (89.477,105.535,4.869)
C5': (91.068,108.713,5.519)
O4': (89.840,106.628,5.706)
C8: (87.551,106.986,4.028)
O2': (91.507,104.433,4.210)
C6: (84.975,104.741,3.160)
C5: (86.094,105.510,3.548)
C4: (87.196,104.820,4.023)
P: (89.558,110.849,5.136)
C4': (91.077,107.224,5.234)
C2': (90.561,105.405,3.799)
C2: (86.195,102.871,3.765)
N1: (85.062,103.398,3.284)
N3: (87.312,103.485,4.158)
N6: (83.841,105.266,2.680)
N7: (86.331,106.881,3.560)
N9: (88.136,105.780,4.330)
O5': (90.000,109.354,4.800)
O3': (92.427,106.906,3.228)
OP2: (88.341,111.163,4.345)
C3': (91.116,106.827,3.771)
C1': (89.477,105.535,4.869)
C5': (91.068,108.713,5.519)
O4': (89.840,106.628,5.706)
C8: (87.551,106.986,4.028)
O2': (91.507,104.433,4.210)
C6: (84.975,104.741,3.160)
C5: (86.094,105.510,3.548)
C4: (87.196,104.820,4.023)
P: (89.558,110.849,5.136)
C4': (91.077,107.224,5.234)
C2': (90.561,105.405,3.799)
C2: (86.195,102.871,3.765)
N1: (85.062,103.398,3.284)
N3: (87.312,103.485,4.158)
N6: (83.841,105.266,2.680)
N7: (86.331,106.881,3.560)
N9: (88.136,105.780,4.330)
O5': (90.000,109.354,4.800)
O3': (92.427,106.906,3.228)
OP1: (77.844,106.085,-4.738)
OP2: (77.842,108.364,-3.561)
C3': (79.542,104.866,-0.400)
C1': (81.445,106.091,0.273)
C5': (80.004,105.256,-2.864)
O6: (81.230,111.914,1.710)
O4': (81.555,105.846,-1.116)
C8: (80.065,108.197,-0.084)
C2: (83.449,109.237,2.474)
C6: (81.689,110.762,1.702)
C5: (81.180,109.614,1.047)
C4: (81.850,108.417,1.183)
P: (78.576,107.152,-4.007)
C4': (80.565,104.866,-1.523)
C2': (80.406,105.111,0.829)
O2': (81.076,103.941,1.257)
N1: (82.852,110.473,2.405)
N2: (84.576,109.151,3.197)
N3: (82.978,108.158,1.876)
N7: (80.059,109.461,0.243)
N9: (81.127,107.506,0.450)
O5': (79.284,106.492,-2.745)
O3': (78.847,103.625,-0.369)
OP2: (77.842,108.364,-3.561)
C3': (79.542,104.866,-0.400)
C1': (81.445,106.091,0.273)
C5': (80.004,105.256,-2.864)
O6: (81.230,111.914,1.710)
O4': (81.555,105.846,-1.116)
C8: (80.065,108.197,-0.084)
C2: (83.449,109.237,2.474)
C6: (81.689,110.762,1.702)
C5: (81.180,109.614,1.047)
C4: (81.850,108.417,1.183)
P: (78.576,107.152,-4.007)
C4': (80.565,104.866,-1.523)
C2': (80.406,105.111,0.829)
O2': (81.076,103.941,1.257)
N1: (82.852,110.473,2.405)
N2: (84.576,109.151,3.197)
N3: (82.978,108.158,1.876)
N7: (80.059,109.461,0.243)
N9: (81.127,107.506,0.450)
O5': (79.284,106.492,-2.745)
O3': (78.847,103.625,-0.369)
Image (generated by PyMOL):