Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0523:02009
Extra
PDB:
ATOM 1 O3' C A 522 24.998 129.964 109.561 1.00 57.65 O
ATOM 2 P G A 523 25.241 128.376 109.657 1.00 60.68 P
ATOM 3 OP1 G A 523 24.190 127.749 108.804 1.00 60.62 O
ATOM 4 OP2 G A 523 25.388 127.940 111.075 1.00 59.13 O
ATOM 5 O5' G A 523 26.647 128.181 108.939 1.00 56.99 O
ATOM 6 C5' G A 523 26.839 128.644 107.597 1.00 53.45 C
ATOM 7 C4' G A 523 28.085 128.042 107.012 1.00 51.11 C
ATOM 8 O4' G A 523 29.249 128.644 107.631 1.00 51.15 O
ATOM 9 C3' G A 523 28.251 126.537 107.207 1.00 50.31 C
ATOM 10 O3' G A 523 28.909 126.045 106.059 1.00 52.37 O
ATOM 11 C2' G A 523 29.256 126.460 108.346 1.00 48.97 C
ATOM 12 O2' G A 523 29.998 125.262 108.327 1.00 51.27 O
ATOM 13 C1' G A 523 30.151 127.622 107.959 1.00 47.98 C
ATOM 14 N9 G A 523 31.131 128.132 108.906 1.00 46.62 N
ATOM 15 C8 G A 523 31.041 128.250 110.272 1.00 45.74 C
ATOM 16 N7 G A 523 32.111 128.775 110.806 1.00 44.06 N
ATOM 17 C5 G A 523 32.948 129.015 109.725 1.00 43.82 C
ATOM 18 C6 G A 523 34.231 129.591 109.668 1.00 42.88 C
ATOM 19 O6 G A 523 34.916 130.028 110.589 1.00 41.32 O
ATOM 20 N1 G A 523 34.711 129.639 108.363 1.00 43.49 N
ATOM 21 C2 G A 523 34.040 129.191 107.255 1.00 43.01 C
ATOM 22 N2 G A 523 34.670 129.296 106.073 1.00 42.58 N
ATOM 23 N3 G A 523 32.840 128.670 107.297 1.00 44.39 N
ATOM 24 C4 G A 523 32.358 128.612 108.553 1.00 45.00 C
ATOM 25 P A A 524 28.113 125.139 105.019 1.00 52.57 P
ATOM 26 OP1 A A 524 26.941 125.938 104.568 1.00 53.11 O
ATOM 27 OP2 A A 524 27.900 123.822 105.652 1.00 53.46 O
ATOM 28 O5' A A 524 29.140 124.986 103.813 1.00 51.53 O
TER
ATOM 1 O3' A B2008 34.259 131.762 103.805 1.00 39.79 O
ATOM 2 P U B2009 34.323 133.274 104.343 1.00 38.11 P
ATOM 3 OP1 U B2009 32.960 133.606 104.806 1.00 40.50 O
ATOM 4 OP2 U B2009 34.980 134.134 103.335 1.00 41.70 O
ATOM 5 O5' U B2009 35.249 133.151 105.629 1.00 41.82 O
ATOM 6 C5' U B2009 36.288 134.100 105.920 1.00 39.93 C
ATOM 7 C4' U B2009 36.624 134.049 107.393 1.00 38.18 C
ATOM 8 O4' U B2009 35.481 134.544 108.139 1.00 40.00 O
ATOM 9 C3' U B2009 36.850 132.657 107.971 1.00 36.75 C
ATOM 10 O3' U B2009 38.154 132.152 107.746 1.00 35.53 O
ATOM 11 C2' U B2009 36.540 132.866 109.448 1.00 36.56 C
ATOM 12 O2' U B2009 37.563 133.524 110.149 1.00 34.71 O
ATOM 13 C1' U B2009 35.358 133.829 109.365 1.00 38.74 C
ATOM 14 N1 U B2009 34.049 133.153 109.400 1.00 40.46 N
ATOM 15 C2 U B2009 33.506 132.862 110.648 1.00 41.43 C
ATOM 16 O2 U B2009 34.058 133.133 111.696 1.00 41.87 O
ATOM 17 N3 U B2009 32.285 132.237 110.620 1.00 44.41 N
ATOM 18 C4 U B2009 31.553 131.887 109.508 1.00 43.95 C
ATOM 19 O4 U B2009 30.457 131.344 109.659 1.00 46.41 O
ATOM 20 C5 U B2009 32.175 132.211 108.251 1.00 41.46 C
ATOM 21 C6 U B2009 33.372 132.816 108.241 1.00 38.55 C
ATOM 22 P U B2010 38.338 130.786 106.928 1.00 39.54 P
ATOM 23 OP1 U B2010 38.755 131.142 105.557 1.00 38.84 O
ATOM 24 OP2 U B2010 37.133 129.946 107.130 1.00 40.61 O
ATOM 25 O5' U B2010 39.501 129.982 107.670 1.00 40.97 O
TER
ATOM 2 P G A 523 25.241 128.376 109.657 1.00 60.68 P
ATOM 3 OP1 G A 523 24.190 127.749 108.804 1.00 60.62 O
ATOM 4 OP2 G A 523 25.388 127.940 111.075 1.00 59.13 O
ATOM 5 O5' G A 523 26.647 128.181 108.939 1.00 56.99 O
ATOM 6 C5' G A 523 26.839 128.644 107.597 1.00 53.45 C
ATOM 7 C4' G A 523 28.085 128.042 107.012 1.00 51.11 C
ATOM 8 O4' G A 523 29.249 128.644 107.631 1.00 51.15 O
ATOM 9 C3' G A 523 28.251 126.537 107.207 1.00 50.31 C
ATOM 10 O3' G A 523 28.909 126.045 106.059 1.00 52.37 O
ATOM 11 C2' G A 523 29.256 126.460 108.346 1.00 48.97 C
ATOM 12 O2' G A 523 29.998 125.262 108.327 1.00 51.27 O
ATOM 13 C1' G A 523 30.151 127.622 107.959 1.00 47.98 C
ATOM 14 N9 G A 523 31.131 128.132 108.906 1.00 46.62 N
ATOM 15 C8 G A 523 31.041 128.250 110.272 1.00 45.74 C
ATOM 16 N7 G A 523 32.111 128.775 110.806 1.00 44.06 N
ATOM 17 C5 G A 523 32.948 129.015 109.725 1.00 43.82 C
ATOM 18 C6 G A 523 34.231 129.591 109.668 1.00 42.88 C
ATOM 19 O6 G A 523 34.916 130.028 110.589 1.00 41.32 O
ATOM 20 N1 G A 523 34.711 129.639 108.363 1.00 43.49 N
ATOM 21 C2 G A 523 34.040 129.191 107.255 1.00 43.01 C
ATOM 22 N2 G A 523 34.670 129.296 106.073 1.00 42.58 N
ATOM 23 N3 G A 523 32.840 128.670 107.297 1.00 44.39 N
ATOM 24 C4 G A 523 32.358 128.612 108.553 1.00 45.00 C
ATOM 25 P A A 524 28.113 125.139 105.019 1.00 52.57 P
ATOM 26 OP1 A A 524 26.941 125.938 104.568 1.00 53.11 O
ATOM 27 OP2 A A 524 27.900 123.822 105.652 1.00 53.46 O
ATOM 28 O5' A A 524 29.140 124.986 103.813 1.00 51.53 O
TER
ATOM 1 O3' A B2008 34.259 131.762 103.805 1.00 39.79 O
ATOM 2 P U B2009 34.323 133.274 104.343 1.00 38.11 P
ATOM 3 OP1 U B2009 32.960 133.606 104.806 1.00 40.50 O
ATOM 4 OP2 U B2009 34.980 134.134 103.335 1.00 41.70 O
ATOM 5 O5' U B2009 35.249 133.151 105.629 1.00 41.82 O
ATOM 6 C5' U B2009 36.288 134.100 105.920 1.00 39.93 C
ATOM 7 C4' U B2009 36.624 134.049 107.393 1.00 38.18 C
ATOM 8 O4' U B2009 35.481 134.544 108.139 1.00 40.00 O
ATOM 9 C3' U B2009 36.850 132.657 107.971 1.00 36.75 C
ATOM 10 O3' U B2009 38.154 132.152 107.746 1.00 35.53 O
ATOM 11 C2' U B2009 36.540 132.866 109.448 1.00 36.56 C
ATOM 12 O2' U B2009 37.563 133.524 110.149 1.00 34.71 O
ATOM 13 C1' U B2009 35.358 133.829 109.365 1.00 38.74 C
ATOM 14 N1 U B2009 34.049 133.153 109.400 1.00 40.46 N
ATOM 15 C2 U B2009 33.506 132.862 110.648 1.00 41.43 C
ATOM 16 O2 U B2009 34.058 133.133 111.696 1.00 41.87 O
ATOM 17 N3 U B2009 32.285 132.237 110.620 1.00 44.41 N
ATOM 18 C4 U B2009 31.553 131.887 109.508 1.00 43.95 C
ATOM 19 O4 U B2009 30.457 131.344 109.659 1.00 46.41 O
ATOM 20 C5 U B2009 32.175 132.211 108.251 1.00 41.46 C
ATOM 21 C6 U B2009 33.372 132.816 108.241 1.00 38.55 C
ATOM 22 P U B2010 38.338 130.786 106.928 1.00 39.54 P
ATOM 23 OP1 U B2010 38.755 131.142 105.557 1.00 38.84 O
ATOM 24 OP2 U B2010 37.133 129.946 107.130 1.00 40.61 O
ATOM 25 O5' U B2010 39.501 129.982 107.670 1.00 40.97 O
TER
Atoms:
OP1: (24.190,127.749,108.804)
OP2: (25.388,127.940,111.075)
C3': (28.251,126.537,107.207)
C1': (30.151,127.622,107.959)
C5': (26.839,128.644,107.597)
O6: (34.916,130.028,110.589)
O4': (29.249,128.644,107.631)
C8: (31.041,128.250,110.272)
C2: (34.040,129.191,107.255)
C6: (34.231,129.591,109.668)
C5: (32.948,129.015,109.725)
C4: (32.358,128.612,108.553)
P: (25.241,128.376,109.657)
C4': (28.085,128.042,107.012)
C2': (29.256,126.460,108.346)
O2': (29.998,125.262,108.327)
N1: (34.711,129.639,108.363)
N2: (34.670,129.296,106.073)
N3: (32.840,128.670,107.297)
N7: (32.111,128.775,110.806)
N9: (31.131,128.132,108.906)
O5': (26.647,128.181,108.939)
O3': (28.909,126.045,106.059)
OP2: (25.388,127.940,111.075)
C3': (28.251,126.537,107.207)
C1': (30.151,127.622,107.959)
C5': (26.839,128.644,107.597)
O6: (34.916,130.028,110.589)
O4': (29.249,128.644,107.631)
C8: (31.041,128.250,110.272)
C2: (34.040,129.191,107.255)
C6: (34.231,129.591,109.668)
C5: (32.948,129.015,109.725)
C4: (32.358,128.612,108.553)
P: (25.241,128.376,109.657)
C4': (28.085,128.042,107.012)
C2': (29.256,126.460,108.346)
O2': (29.998,125.262,108.327)
N1: (34.711,129.639,108.363)
N2: (34.670,129.296,106.073)
N3: (32.840,128.670,107.297)
N7: (32.111,128.775,110.806)
N9: (31.131,128.132,108.906)
O5': (26.647,128.181,108.939)
O3': (28.909,126.045,106.059)
C4: (31.553,131.887,109.508)
N3: (32.285,132.237,110.620)
OP1: (32.960,133.606,104.806)
OP2: (34.980,134.134,103.335)
C2: (33.506,132.862,110.648)
C1': (35.358,133.829,109.365)
C3': (36.850,132.657,107.971)
O5': (35.249,133.151,105.629)
O4': (35.481,134.544,108.139)
C5': (36.288,134.100,105.920)
P: (34.323,133.274,104.343)
C4': (36.624,134.049,107.393)
C2': (36.540,132.866,109.448)
O2': (37.563,133.524,110.149)
N1: (34.049,133.153,109.400)
O4: (30.457,131.344,109.659)
O2: (34.058,133.133,111.696)
C6: (33.372,132.816,108.241)
C5: (32.175,132.211,108.251)
O3': (38.154,132.152,107.746)
N3: (32.285,132.237,110.620)
OP1: (32.960,133.606,104.806)
OP2: (34.980,134.134,103.335)
C2: (33.506,132.862,110.648)
C1': (35.358,133.829,109.365)
C3': (36.850,132.657,107.971)
O5': (35.249,133.151,105.629)
O4': (35.481,134.544,108.139)
C5': (36.288,134.100,105.920)
P: (34.323,133.274,104.343)
C4': (36.624,134.049,107.393)
C2': (36.540,132.866,109.448)
O2': (37.563,133.524,110.149)
N1: (34.049,133.153,109.400)
O4: (30.457,131.344,109.659)
O2: (34.058,133.133,111.696)
C6: (33.372,132.816,108.241)
C5: (32.175,132.211,108.251)
O3': (38.154,132.152,107.746)
Image (generated by PyMOL):