ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0523:02009

Extra

PDB:
ATOM 1 O3' C A 522 25.031 129.916 109.656 1.00 50.66 O
ATOM 2 P G A 523 25.282 128.330 109.728 1.00 54.65 P
ATOM 3 OP1 G A 523 24.241 127.709 108.861 1.00 54.45 O
ATOM 4 OP2 G A 523 25.426 127.872 111.138 1.00 53.41 O
ATOM 5 O5' G A 523 26.695 128.155 109.018 1.00 50.61 O
ATOM 6 C5' G A 523 26.910 128.678 107.703 1.00 47.01 C
ATOM 7 C4' G A 523 28.144 128.069 107.096 1.00 45.10 C
ATOM 8 O4' G A 523 29.336 128.634 107.705 1.00 45.16 O
ATOM 9 C3' G A 523 28.283 126.558 107.249 1.00 43.94 C
ATOM 10 O3' G A 523 28.930 126.103 106.081 1.00 45.49 O
ATOM 11 C2' G A 523 29.281 126.430 108.393 1.00 42.04 C
ATOM 12 O2' G A 523 29.989 125.210 108.341 1.00 44.41 O
ATOM 13 C1' G A 523 30.207 127.583 108.043 1.00 42.04 C
ATOM 14 N9 G A 523 31.191 128.070 109.003 1.00 40.81 N
ATOM 15 C8 G A 523 31.091 128.187 110.372 1.00 40.54 C
ATOM 16 N7 G A 523 32.157 128.715 110.915 1.00 38.51 N
ATOM 17 C5 G A 523 33.007 128.949 109.840 1.00 38.39 C
ATOM 18 C6 G A 523 34.303 129.518 109.792 1.00 36.69 C
ATOM 19 O6 G A 523 34.987 129.948 110.715 1.00 37.84 O
ATOM 20 N1 G A 523 34.796 129.564 108.492 1.00 37.65 N
ATOM 21 C2 G A 523 34.129 129.122 107.377 1.00 37.65 C
ATOM 22 N2 G A 523 34.766 129.242 106.203 1.00 35.52 N
ATOM 23 N3 G A 523 32.923 128.598 107.409 1.00 38.69 N
ATOM 24 C4 G A 523 32.427 128.543 108.660 1.00 39.09 C
ATOM 25 P A A 524 28.204 125.053 105.129 1.00 44.46 P
ATOM 26 OP1 A A 524 26.973 125.712 104.620 1.00 44.08 O
ATOM 27 OP2 A A 524 28.108 123.772 105.857 1.00 44.15 O
ATOM 28 O5' A A 524 29.225 124.899 103.923 1.00 43.45 O
TER

ATOM 1 O3' A B2008 34.278 131.703 103.870 1.00 34.06 O
ATOM 2 P U B2009 34.360 133.198 104.442 1.00 32.48 P
ATOM 3 OP1 U B2009 33.014 133.513 104.957 1.00 34.08 O
ATOM 4 OP2 U B2009 34.980 134.084 103.434 1.00 36.48 O
ATOM 5 O5' U B2009 35.331 133.046 105.695 1.00 36.56 O
ATOM 6 C5' U B2009 36.334 134.030 106.005 1.00 33.88 C
ATOM 7 C4' U B2009 36.658 133.984 107.482 1.00 33.31 C
ATOM 8 O4' U B2009 35.511 134.484 108.218 1.00 33.60 O
ATOM 9 C3' U B2009 36.889 132.596 108.070 1.00 31.74 C
ATOM 10 O3' U B2009 38.198 132.086 107.854 1.00 30.69 O
ATOM 11 C2' U B2009 36.559 132.809 109.543 1.00 31.19 C
ATOM 12 O2' U B2009 37.560 133.471 110.267 1.00 30.18 O
ATOM 13 C1' U B2009 35.379 133.772 109.442 1.00 33.48 C
ATOM 14 N1 U B2009 34.076 133.088 109.464 1.00 35.80 N
ATOM 15 C2 U B2009 33.526 132.810 110.704 1.00 35.73 C
ATOM 16 O2 U B2009 34.073 133.089 111.750 1.00 38.80 O
ATOM 17 N3 U B2009 32.304 132.189 110.673 1.00 39.39 N
ATOM 18 C4 U B2009 31.586 131.821 109.559 1.00 38.16 C
ATOM 19 O4 U B2009 30.492 131.275 109.707 1.00 38.55 O
ATOM 20 C5 U B2009 32.222 132.128 108.305 1.00 36.27 C
ATOM 21 C6 U B2009 33.416 132.736 108.301 1.00 32.83 C
ATOM 22 P U B2010 38.386 130.727 107.017 1.00 33.55 P
ATOM 23 OP1 U B2010 38.672 131.112 105.622 1.00 33.72 O
ATOM 24 OP2 U B2010 37.235 129.839 107.306 1.00 35.05 O
ATOM 25 O5' U B2010 39.633 129.973 107.672 1.00 36.18 O
TER

Atoms:
OP1: (24.241,127.709,108.861)
OP2: (25.426,127.872,111.138)
C3': (28.283,126.558,107.249)
C1': (30.207,127.583,108.043)
C5': (26.910,128.678,107.703)
O6: (34.987,129.948,110.715)
O4': (29.336,128.634,107.705)
C8: (31.091,128.187,110.372)
C2: (34.129,129.122,107.377)
C6: (34.303,129.518,109.792)
C5: (33.007,128.949,109.840)
C4: (32.427,128.543,108.660)
P: (25.282,128.330,109.728)
C4': (28.144,128.069,107.096)
C2': (29.281,126.430,108.393)
O2': (29.989,125.210,108.341)
N1: (34.796,129.564,108.492)
N2: (34.766,129.242,106.203)
N3: (32.923,128.598,107.409)
N7: (32.157,128.715,110.915)
N9: (31.191,128.070,109.003)
O5': (26.695,128.155,109.018)
O3': (28.930,126.103,106.081)
C4: (31.586,131.821,109.559)
N3: (32.304,132.189,110.673)
OP1: (33.014,133.513,104.957)
OP2: (34.980,134.084,103.434)
C2: (33.526,132.810,110.704)
C1': (35.379,133.772,109.442)
C3': (36.889,132.596,108.070)
O5': (35.331,133.046,105.695)
O4': (35.511,134.484,108.218)
C5': (36.334,134.030,106.005)
P: (34.360,133.198,104.442)
C4': (36.658,133.984,107.482)
C2': (36.559,132.809,109.543)
O2': (37.560,133.471,110.267)
N1: (34.076,133.088,109.464)
O4: (30.492,131.275,109.707)
O2: (34.073,133.089,111.750)
C6: (33.416,132.736,108.301)
C5: (32.222,132.128,108.305)
O3': (38.198,132.086,107.854)
Image (generated by PyMOL):
PyMOL image
show in jmol