Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0506:0505
Extra
PDB:
ATOM 1 O3' U A 505 20.755 140.575 65.051 1.00 37.38 O
ATOM 2 P G A 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 3 OP1 G A 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 4 OP2 G A 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 5 O5' G A 506 21.660 141.002 67.367 1.00 40.46 O
ATOM 6 C5' G A 506 22.079 139.644 67.560 1.00 36.96 C
ATOM 7 C4' G A 506 23.491 139.612 68.079 1.00 36.24 C
ATOM 8 O4' G A 506 24.379 140.185 67.071 1.00 34.62 O
ATOM 9 C3' G A 506 23.739 140.427 69.356 1.00 34.75 C
ATOM 10 O3' G A 506 24.655 139.700 70.177 1.00 35.13 O
ATOM 11 C2' G A 506 24.437 141.666 68.805 1.00 34.52 C
ATOM 12 O2' G A 506 25.250 142.371 69.720 1.00 36.32 O
ATOM 13 C1' G A 506 25.293 141.022 67.725 1.00 34.55 C
ATOM 14 N9 G A 506 25.919 141.957 66.796 1.00 35.47 N
ATOM 15 C8 G A 506 25.420 143.161 66.357 1.00 31.93 C
ATOM 16 N7 G A 506 26.293 143.861 65.687 1.00 34.46 N
ATOM 17 C5 G A 506 27.426 143.060 65.650 1.00 34.21 C
ATOM 18 C6 G A 506 28.722 143.314 65.115 1.00 35.14 C
ATOM 19 O6 G A 506 29.146 144.342 64.574 1.00 35.96 O
ATOM 20 N1 G A 506 29.566 142.221 65.279 1.00 33.86 N
ATOM 21 C2 G A 506 29.217 141.039 65.879 1.00 32.88 C
ATOM 22 N2 G A 506 30.162 140.090 65.900 1.00 32.46 N
ATOM 23 N3 G A 506 28.025 140.802 66.413 1.00 34.91 N
ATOM 24 C4 G A 506 27.189 141.852 66.271 1.00 35.27 C
ATOM 25 P A A 507 24.515 139.734 71.784 1.00 33.49 P
ATOM 26 OP1 A A 507 23.120 140.072 72.154 1.00 31.38 O
ATOM 27 OP2 A A 507 25.631 140.567 72.299 1.00 33.57 O
ATOM 28 O5' A A 507 24.822 138.225 72.205 1.00 34.69 O
TER
ATOM 1 O3' A B 504 22.465 145.067 61.090 1.00 40.47 O
ATOM 2 P U B 505 22.626 145.067 62.686 1.00 40.51 P
ATOM 3 OP1 U B 505 21.525 145.850 63.284 1.00 41.19 O
ATOM 4 OP2 U B 505 24.030 145.454 62.978 1.00 43.20 O
ATOM 5 O5' U B 505 22.461 143.530 63.076 1.00 38.50 O
ATOM 6 C5' U B 505 21.281 142.787 62.718 1.00 37.07 C
ATOM 7 C4' U B 505 21.529 141.308 62.903 1.00 36.56 C
ATOM 8 O4' U B 505 22.642 140.919 62.061 1.00 36.63 O
ATOM 9 C3' U B 505 21.928 140.888 64.310 1.00 35.30 C
ATOM 10 O3' U B 505 20.755 140.575 65.051 1.00 37.38 O
ATOM 11 C2' U B 505 22.753 139.628 64.070 1.00 36.89 C
ATOM 12 O2' U B 505 21.949 138.478 63.942 1.00 37.48 O
ATOM 13 C1' U B 505 23.410 139.924 62.714 1.00 35.59 C
ATOM 14 N1 U B 505 24.821 140.351 62.739 1.00 34.01 N
ATOM 15 C2 U B 505 25.792 139.385 62.995 1.00 35.05 C
ATOM 16 O2 U B 505 25.529 138.209 63.213 1.00 34.63 O
ATOM 17 N3 U B 505 27.086 139.847 62.987 1.00 34.11 N
ATOM 18 C4 U B 505 27.510 141.139 62.751 1.00 35.29 C
ATOM 19 O4 U B 505 28.720 141.390 62.768 1.00 32.60 O
ATOM 20 C5 U B 505 26.453 142.081 62.504 1.00 35.61 C
ATOM 21 C6 U B 505 25.179 141.667 62.507 1.00 34.79 C
ATOM 22 P G B 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 23 OP1 G B 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 24 OP2 G B 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 25 O5' G B 506 21.660 141.002 67.367 1.00 40.46 O
TER
ATOM 2 P G A 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 3 OP1 G A 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 4 OP2 G A 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 5 O5' G A 506 21.660 141.002 67.367 1.00 40.46 O
ATOM 6 C5' G A 506 22.079 139.644 67.560 1.00 36.96 C
ATOM 7 C4' G A 506 23.491 139.612 68.079 1.00 36.24 C
ATOM 8 O4' G A 506 24.379 140.185 67.071 1.00 34.62 O
ATOM 9 C3' G A 506 23.739 140.427 69.356 1.00 34.75 C
ATOM 10 O3' G A 506 24.655 139.700 70.177 1.00 35.13 O
ATOM 11 C2' G A 506 24.437 141.666 68.805 1.00 34.52 C
ATOM 12 O2' G A 506 25.250 142.371 69.720 1.00 36.32 O
ATOM 13 C1' G A 506 25.293 141.022 67.725 1.00 34.55 C
ATOM 14 N9 G A 506 25.919 141.957 66.796 1.00 35.47 N
ATOM 15 C8 G A 506 25.420 143.161 66.357 1.00 31.93 C
ATOM 16 N7 G A 506 26.293 143.861 65.687 1.00 34.46 N
ATOM 17 C5 G A 506 27.426 143.060 65.650 1.00 34.21 C
ATOM 18 C6 G A 506 28.722 143.314 65.115 1.00 35.14 C
ATOM 19 O6 G A 506 29.146 144.342 64.574 1.00 35.96 O
ATOM 20 N1 G A 506 29.566 142.221 65.279 1.00 33.86 N
ATOM 21 C2 G A 506 29.217 141.039 65.879 1.00 32.88 C
ATOM 22 N2 G A 506 30.162 140.090 65.900 1.00 32.46 N
ATOM 23 N3 G A 506 28.025 140.802 66.413 1.00 34.91 N
ATOM 24 C4 G A 506 27.189 141.852 66.271 1.00 35.27 C
ATOM 25 P A A 507 24.515 139.734 71.784 1.00 33.49 P
ATOM 26 OP1 A A 507 23.120 140.072 72.154 1.00 31.38 O
ATOM 27 OP2 A A 507 25.631 140.567 72.299 1.00 33.57 O
ATOM 28 O5' A A 507 24.822 138.225 72.205 1.00 34.69 O
TER
ATOM 1 O3' A B 504 22.465 145.067 61.090 1.00 40.47 O
ATOM 2 P U B 505 22.626 145.067 62.686 1.00 40.51 P
ATOM 3 OP1 U B 505 21.525 145.850 63.284 1.00 41.19 O
ATOM 4 OP2 U B 505 24.030 145.454 62.978 1.00 43.20 O
ATOM 5 O5' U B 505 22.461 143.530 63.076 1.00 38.50 O
ATOM 6 C5' U B 505 21.281 142.787 62.718 1.00 37.07 C
ATOM 7 C4' U B 505 21.529 141.308 62.903 1.00 36.56 C
ATOM 8 O4' U B 505 22.642 140.919 62.061 1.00 36.63 O
ATOM 9 C3' U B 505 21.928 140.888 64.310 1.00 35.30 C
ATOM 10 O3' U B 505 20.755 140.575 65.051 1.00 37.38 O
ATOM 11 C2' U B 505 22.753 139.628 64.070 1.00 36.89 C
ATOM 12 O2' U B 505 21.949 138.478 63.942 1.00 37.48 O
ATOM 13 C1' U B 505 23.410 139.924 62.714 1.00 35.59 C
ATOM 14 N1 U B 505 24.821 140.351 62.739 1.00 34.01 N
ATOM 15 C2 U B 505 25.792 139.385 62.995 1.00 35.05 C
ATOM 16 O2 U B 505 25.529 138.209 63.213 1.00 34.63 O
ATOM 17 N3 U B 505 27.086 139.847 62.987 1.00 34.11 N
ATOM 18 C4 U B 505 27.510 141.139 62.751 1.00 35.29 C
ATOM 19 O4 U B 505 28.720 141.390 62.768 1.00 32.60 O
ATOM 20 C5 U B 505 26.453 142.081 62.504 1.00 35.61 C
ATOM 21 C6 U B 505 25.179 141.667 62.507 1.00 34.79 C
ATOM 22 P G B 506 20.424 141.347 66.428 1.00 39.64 P
ATOM 23 OP1 G B 506 19.203 140.714 66.992 1.00 36.06 O
ATOM 24 OP2 G B 506 20.452 142.809 66.211 1.00 39.13 O
ATOM 25 O5' G B 506 21.660 141.002 67.367 1.00 40.46 O
TER
Atoms:
OP1: (19.203,140.714,66.992)
OP2: (20.452,142.809,66.211)
C3': (23.739,140.427,69.356)
C1': (25.293,141.022,67.725)
C5': (22.079,139.644,67.560)
O6: (29.146,144.342,64.574)
O4': (24.379,140.185,67.071)
C8: (25.420,143.161,66.357)
C2: (29.217,141.039,65.879)
C6: (28.722,143.314,65.115)
C5: (27.426,143.060,65.650)
C4: (27.189,141.852,66.271)
P: (20.424,141.347,66.428)
C4': (23.491,139.612,68.079)
C2': (24.437,141.666,68.805)
O2': (25.250,142.371,69.720)
N1: (29.566,142.221,65.279)
N2: (30.162,140.090,65.900)
N3: (28.025,140.802,66.413)
N7: (26.293,143.861,65.687)
N9: (25.919,141.957,66.796)
O5': (21.660,141.002,67.367)
O3': (24.655,139.700,70.177)
OP2: (20.452,142.809,66.211)
C3': (23.739,140.427,69.356)
C1': (25.293,141.022,67.725)
C5': (22.079,139.644,67.560)
O6: (29.146,144.342,64.574)
O4': (24.379,140.185,67.071)
C8: (25.420,143.161,66.357)
C2: (29.217,141.039,65.879)
C6: (28.722,143.314,65.115)
C5: (27.426,143.060,65.650)
C4: (27.189,141.852,66.271)
P: (20.424,141.347,66.428)
C4': (23.491,139.612,68.079)
C2': (24.437,141.666,68.805)
O2': (25.250,142.371,69.720)
N1: (29.566,142.221,65.279)
N2: (30.162,140.090,65.900)
N3: (28.025,140.802,66.413)
N7: (26.293,143.861,65.687)
N9: (25.919,141.957,66.796)
O5': (21.660,141.002,67.367)
O3': (24.655,139.700,70.177)
C4: (27.510,141.139,62.751)
N3: (27.086,139.847,62.987)
OP1: (21.525,145.850,63.284)
OP2: (24.030,145.454,62.978)
C2: (25.792,139.385,62.995)
C1': (23.410,139.924,62.714)
C3': (21.928,140.888,64.310)
O5': (22.461,143.530,63.076)
O4': (22.642,140.919,62.061)
C5': (21.281,142.787,62.718)
P: (22.626,145.067,62.686)
C4': (21.529,141.308,62.903)
C2': (22.753,139.628,64.070)
O2': (21.949,138.478,63.942)
N1: (24.821,140.351,62.739)
O4: (28.720,141.390,62.768)
O2: (25.529,138.209,63.213)
C6: (25.179,141.667,62.507)
C5: (26.453,142.081,62.504)
O3': (20.755,140.575,65.051)
N3: (27.086,139.847,62.987)
OP1: (21.525,145.850,63.284)
OP2: (24.030,145.454,62.978)
C2: (25.792,139.385,62.995)
C1': (23.410,139.924,62.714)
C3': (21.928,140.888,64.310)
O5': (22.461,143.530,63.076)
O4': (22.642,140.919,62.061)
C5': (21.281,142.787,62.718)
P: (22.626,145.067,62.686)
C4': (21.529,141.308,62.903)
C2': (22.753,139.628,64.070)
O2': (21.949,138.478,63.942)
N1: (24.821,140.351,62.739)
O4: (28.720,141.390,62.768)
O2: (25.529,138.209,63.213)
C6: (25.179,141.667,62.507)
C5: (26.453,142.081,62.504)
O3': (20.755,140.575,65.051)
Image (generated by PyMOL):