Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0355:0354
Extra
PDB:
ATOM 1 O3' U A 354 73.495 112.094 -9.638 1.00 85.04 O
ATOM 2 P G A 355 73.637 110.928 -10.739 1.00 86.53 P
ATOM 3 OP1 G A 355 75.074 110.872 -11.112 1.00 86.39 O
ATOM 4 OP2 G A 355 72.607 111.120 -11.796 1.00 85.52 O
ATOM 5 O5' G A 355 73.294 109.593 -9.943 1.00 85.80 O
ATOM 6 C5' G A 355 73.848 109.352 -8.639 1.00 86.54 C
ATOM 7 C4' G A 355 72.945 108.431 -7.858 1.00 87.22 C
ATOM 8 O4' G A 355 71.611 109.011 -7.836 1.00 86.90 O
ATOM 9 C3' G A 355 72.782 107.025 -8.427 1.00 88.31 C
ATOM 10 O3' G A 355 72.555 106.117 -7.358 1.00 90.62 O
ATOM 11 C2' G A 355 71.525 107.152 -9.282 1.00 87.75 C
ATOM 12 O2' G A 355 70.842 105.923 -9.465 1.00 87.23 O
ATOM 13 C1' G A 355 70.692 108.132 -8.455 1.00 86.36 C
ATOM 14 N9 G A 355 69.774 108.930 -9.262 1.00 84.80 N
ATOM 15 C8 G A 355 70.074 109.651 -10.395 1.00 84.67 C
ATOM 16 N7 G A 355 69.035 110.246 -10.915 1.00 84.41 N
ATOM 17 C5 G A 355 67.986 109.902 -10.074 1.00 83.81 C
ATOM 18 C6 G A 355 66.611 110.245 -10.135 1.00 84.14 C
ATOM 19 O6 G A 355 66.025 110.940 -10.977 1.00 84.89 O
ATOM 20 N1 G A 355 65.899 109.687 -9.077 1.00 83.85 N
ATOM 21 C2 G A 355 66.438 108.899 -8.089 1.00 83.14 C
ATOM 22 N2 G A 355 65.588 108.462 -7.150 1.00 82.68 N
ATOM 23 N3 G A 355 67.716 108.566 -8.026 1.00 82.99 N
ATOM 24 C4 G A 355 68.427 109.098 -9.043 1.00 83.71 C
ATOM 25 P C A 356 73.367 104.732 -7.293 1.00 91.53 P
ATOM 26 OP1 C A 356 74.659 104.992 -6.603 1.00 90.61 O
ATOM 27 OP2 C A 356 73.366 104.124 -8.648 1.00 91.22 O
ATOM 28 O5' C A 356 72.465 103.836 -6.335 1.00 92.04 O
TER
ATOM 1 O3' G B 353 69.680 116.561 -11.606 1.00 81.73 O
ATOM 2 P U B 354 69.933 115.081 -12.189 1.00 83.08 P
ATOM 3 OP1 U B 354 70.936 115.195 -13.279 1.00 83.57 O
ATOM 4 OP2 U B 354 68.615 114.448 -12.468 1.00 82.63 O
ATOM 5 O5' U B 354 70.626 114.303 -10.985 1.00 83.19 O
ATOM 6 C5' U B 354 71.878 114.759 -10.434 1.00 82.79 C
ATOM 7 C4' U B 354 72.170 114.046 -9.134 1.00 82.90 C
ATOM 8 O4' U B 354 71.122 114.336 -8.175 1.00 81.78 O
ATOM 9 C3' U B 354 72.202 112.528 -9.212 1.00 83.11 C
ATOM 10 O3' U B 354 73.495 112.094 -9.638 1.00 85.04 O
ATOM 11 C2' U B 354 71.906 112.119 -7.772 1.00 81.54 C
ATOM 12 O2' U B 354 73.045 112.188 -6.941 1.00 81.60 O
ATOM 13 C1' U B 354 70.930 113.215 -7.333 1.00 80.24 C
ATOM 14 N1 U B 354 69.504 112.854 -7.335 1.00 79.03 N
ATOM 15 C2 U B 354 69.021 112.137 -6.251 1.00 78.96 C
ATOM 16 O2 U B 354 69.729 111.773 -5.326 1.00 80.26 O
ATOM 17 N3 U B 354 67.676 111.861 -6.288 1.00 77.78 N
ATOM 18 C4 U B 354 66.783 112.214 -7.275 1.00 77.68 C
ATOM 19 O4 U B 354 65.588 111.951 -7.130 1.00 76.95 O
ATOM 20 C5 U B 354 67.359 112.936 -8.369 1.00 78.17 C
ATOM 21 C6 U B 354 68.666 113.223 -8.363 1.00 78.38 C
ATOM 22 P G B 355 73.637 110.928 -10.739 1.00 86.53 P
ATOM 23 OP1 G B 355 75.074 110.872 -11.112 1.00 86.39 O
ATOM 24 OP2 G B 355 72.607 111.120 -11.796 1.00 85.52 O
ATOM 25 O5' G B 355 73.294 109.593 -9.943 1.00 85.80 O
TER
ATOM 2 P G A 355 73.637 110.928 -10.739 1.00 86.53 P
ATOM 3 OP1 G A 355 75.074 110.872 -11.112 1.00 86.39 O
ATOM 4 OP2 G A 355 72.607 111.120 -11.796 1.00 85.52 O
ATOM 5 O5' G A 355 73.294 109.593 -9.943 1.00 85.80 O
ATOM 6 C5' G A 355 73.848 109.352 -8.639 1.00 86.54 C
ATOM 7 C4' G A 355 72.945 108.431 -7.858 1.00 87.22 C
ATOM 8 O4' G A 355 71.611 109.011 -7.836 1.00 86.90 O
ATOM 9 C3' G A 355 72.782 107.025 -8.427 1.00 88.31 C
ATOM 10 O3' G A 355 72.555 106.117 -7.358 1.00 90.62 O
ATOM 11 C2' G A 355 71.525 107.152 -9.282 1.00 87.75 C
ATOM 12 O2' G A 355 70.842 105.923 -9.465 1.00 87.23 O
ATOM 13 C1' G A 355 70.692 108.132 -8.455 1.00 86.36 C
ATOM 14 N9 G A 355 69.774 108.930 -9.262 1.00 84.80 N
ATOM 15 C8 G A 355 70.074 109.651 -10.395 1.00 84.67 C
ATOM 16 N7 G A 355 69.035 110.246 -10.915 1.00 84.41 N
ATOM 17 C5 G A 355 67.986 109.902 -10.074 1.00 83.81 C
ATOM 18 C6 G A 355 66.611 110.245 -10.135 1.00 84.14 C
ATOM 19 O6 G A 355 66.025 110.940 -10.977 1.00 84.89 O
ATOM 20 N1 G A 355 65.899 109.687 -9.077 1.00 83.85 N
ATOM 21 C2 G A 355 66.438 108.899 -8.089 1.00 83.14 C
ATOM 22 N2 G A 355 65.588 108.462 -7.150 1.00 82.68 N
ATOM 23 N3 G A 355 67.716 108.566 -8.026 1.00 82.99 N
ATOM 24 C4 G A 355 68.427 109.098 -9.043 1.00 83.71 C
ATOM 25 P C A 356 73.367 104.732 -7.293 1.00 91.53 P
ATOM 26 OP1 C A 356 74.659 104.992 -6.603 1.00 90.61 O
ATOM 27 OP2 C A 356 73.366 104.124 -8.648 1.00 91.22 O
ATOM 28 O5' C A 356 72.465 103.836 -6.335 1.00 92.04 O
TER
ATOM 1 O3' G B 353 69.680 116.561 -11.606 1.00 81.73 O
ATOM 2 P U B 354 69.933 115.081 -12.189 1.00 83.08 P
ATOM 3 OP1 U B 354 70.936 115.195 -13.279 1.00 83.57 O
ATOM 4 OP2 U B 354 68.615 114.448 -12.468 1.00 82.63 O
ATOM 5 O5' U B 354 70.626 114.303 -10.985 1.00 83.19 O
ATOM 6 C5' U B 354 71.878 114.759 -10.434 1.00 82.79 C
ATOM 7 C4' U B 354 72.170 114.046 -9.134 1.00 82.90 C
ATOM 8 O4' U B 354 71.122 114.336 -8.175 1.00 81.78 O
ATOM 9 C3' U B 354 72.202 112.528 -9.212 1.00 83.11 C
ATOM 10 O3' U B 354 73.495 112.094 -9.638 1.00 85.04 O
ATOM 11 C2' U B 354 71.906 112.119 -7.772 1.00 81.54 C
ATOM 12 O2' U B 354 73.045 112.188 -6.941 1.00 81.60 O
ATOM 13 C1' U B 354 70.930 113.215 -7.333 1.00 80.24 C
ATOM 14 N1 U B 354 69.504 112.854 -7.335 1.00 79.03 N
ATOM 15 C2 U B 354 69.021 112.137 -6.251 1.00 78.96 C
ATOM 16 O2 U B 354 69.729 111.773 -5.326 1.00 80.26 O
ATOM 17 N3 U B 354 67.676 111.861 -6.288 1.00 77.78 N
ATOM 18 C4 U B 354 66.783 112.214 -7.275 1.00 77.68 C
ATOM 19 O4 U B 354 65.588 111.951 -7.130 1.00 76.95 O
ATOM 20 C5 U B 354 67.359 112.936 -8.369 1.00 78.17 C
ATOM 21 C6 U B 354 68.666 113.223 -8.363 1.00 78.38 C
ATOM 22 P G B 355 73.637 110.928 -10.739 1.00 86.53 P
ATOM 23 OP1 G B 355 75.074 110.872 -11.112 1.00 86.39 O
ATOM 24 OP2 G B 355 72.607 111.120 -11.796 1.00 85.52 O
ATOM 25 O5' G B 355 73.294 109.593 -9.943 1.00 85.80 O
TER
Atoms:
OP1: (75.074,110.872,-11.112)
OP2: (72.607,111.120,-11.796)
C3': (72.782,107.025,-8.427)
C1': (70.692,108.132,-8.455)
C5': (73.848,109.352,-8.639)
O6: (66.025,110.940,-10.977)
O4': (71.611,109.011,-7.836)
C8: (70.074,109.651,-10.395)
C2: (66.438,108.899,-8.089)
C6: (66.611,110.245,-10.135)
C5: (67.986,109.902,-10.074)
C4: (68.427,109.098,-9.043)
P: (73.637,110.928,-10.739)
C4': (72.945,108.431,-7.858)
C2': (71.525,107.152,-9.282)
O2': (70.842,105.923,-9.465)
N1: (65.899,109.687,-9.077)
N2: (65.588,108.462,-7.150)
N3: (67.716,108.566,-8.026)
N7: (69.035,110.246,-10.915)
N9: (69.774,108.930,-9.262)
O5': (73.294,109.593,-9.943)
O3': (72.555,106.117,-7.358)
OP2: (72.607,111.120,-11.796)
C3': (72.782,107.025,-8.427)
C1': (70.692,108.132,-8.455)
C5': (73.848,109.352,-8.639)
O6: (66.025,110.940,-10.977)
O4': (71.611,109.011,-7.836)
C8: (70.074,109.651,-10.395)
C2: (66.438,108.899,-8.089)
C6: (66.611,110.245,-10.135)
C5: (67.986,109.902,-10.074)
C4: (68.427,109.098,-9.043)
P: (73.637,110.928,-10.739)
C4': (72.945,108.431,-7.858)
C2': (71.525,107.152,-9.282)
O2': (70.842,105.923,-9.465)
N1: (65.899,109.687,-9.077)
N2: (65.588,108.462,-7.150)
N3: (67.716,108.566,-8.026)
N7: (69.035,110.246,-10.915)
N9: (69.774,108.930,-9.262)
O5': (73.294,109.593,-9.943)
O3': (72.555,106.117,-7.358)
C4: (66.783,112.214,-7.275)
N3: (67.676,111.861,-6.288)
OP1: (70.936,115.195,-13.279)
OP2: (68.615,114.448,-12.468)
C2: (69.021,112.137,-6.251)
C1': (70.930,113.215,-7.333)
C3': (72.202,112.528,-9.212)
O5': (70.626,114.303,-10.985)
O4': (71.122,114.336,-8.175)
C5': (71.878,114.759,-10.434)
P: (69.933,115.081,-12.189)
C4': (72.170,114.046,-9.134)
C2': (71.906,112.119,-7.772)
O2': (73.045,112.188,-6.941)
N1: (69.504,112.854,-7.335)
O4: (65.588,111.951,-7.130)
O2: (69.729,111.773,-5.326)
C6: (68.666,113.223,-8.363)
C5: (67.359,112.936,-8.369)
O3': (73.495,112.094,-9.638)
N3: (67.676,111.861,-6.288)
OP1: (70.936,115.195,-13.279)
OP2: (68.615,114.448,-12.468)
C2: (69.021,112.137,-6.251)
C1': (70.930,113.215,-7.333)
C3': (72.202,112.528,-9.212)
O5': (70.626,114.303,-10.985)
O4': (71.122,114.336,-8.175)
C5': (71.878,114.759,-10.434)
P: (69.933,115.081,-12.189)
C4': (72.170,114.046,-9.134)
C2': (71.906,112.119,-7.772)
O2': (73.045,112.188,-6.941)
N1: (69.504,112.854,-7.335)
O4: (65.588,111.951,-7.130)
O2: (69.729,111.773,-5.326)
C6: (68.666,113.223,-8.363)
C5: (67.359,112.936,-8.369)
O3': (73.495,112.094,-9.638)
Image (generated by PyMOL):