Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A490:A489
Extra
PDB:
ATOM 1 O3' U A 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 2 P G A 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G A 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G A 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G A 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G A 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G A 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G A 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G A 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G A 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G A 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G A 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G A 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G A 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G A 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G A 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G A 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G A 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G A 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G A 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G A 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G A 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G A 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G A 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A A 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A A 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A A 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A A 491 45.560-105.633 -44.350 1.00 57.41 O
TER
ATOM 1 O3' G B 488 46.888 -95.677 -38.791 1.00 56.50 O
ATOM 2 P U B 489 46.032 -96.617 -39.825 1.00 49.61 P
ATOM 3 OP1 U B 489 46.682 -96.830 -41.153 1.00 44.43 O
ATOM 4 OP2 U B 489 44.641 -96.119 -39.780 1.00 50.03 O
ATOM 5 O5' U B 489 45.930 -98.011 -39.060 1.00 43.82 O
ATOM 6 C5' U B 489 46.514 -98.181 -37.766 1.00 46.59 C
ATOM 7 C4' U B 489 45.921 -99.378 -37.087 1.00 51.08 C
ATOM 8 O4' U B 489 44.541 -99.103 -36.718 1.00 56.36 O
ATOM 9 C3' U B 489 45.869-100.609 -37.969 1.00 48.62 C
ATOM 10 O3' U B 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 11 C2' U B 489 44.696-101.387 -37.380 1.00 56.46 C
ATOM 12 O2' U B 489 45.103-102.125 -36.247 1.00 59.05 O
ATOM 13 C1' U B 489 43.755-100.258 -36.929 1.00 54.83 C
ATOM 14 N1 U B 489 42.678 -99.909 -37.873 1.00 58.47 N
ATOM 15 C2 U B 489 41.659-100.821 -38.111 1.00 62.41 C
ATOM 16 O2 U B 489 41.605-101.913 -37.578 1.00 65.30 O
ATOM 17 N3 U B 489 40.702-100.399 -38.999 1.00 61.99 N
ATOM 18 C4 U B 489 40.654 -99.187 -39.663 1.00 64.87 C
ATOM 19 O4 U B 489 39.697 -98.925 -40.408 1.00 68.75 O
ATOM 20 C5 U B 489 41.737 -98.313 -39.371 1.00 65.53 C
ATOM 21 C6 U B 489 42.685 -98.692 -38.511 1.00 62.12 C
ATOM 22 P G B 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 23 OP1 G B 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 24 OP2 G B 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 25 O5' G B 490 46.764-102.925 -39.791 1.00 54.35 O
TER
ATOM 2 P G A 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G A 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G A 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G A 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G A 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G A 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G A 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G A 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G A 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G A 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G A 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G A 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G A 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G A 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G A 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G A 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G A 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G A 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G A 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G A 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G A 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G A 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G A 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A A 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A A 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A A 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A A 491 45.560-105.633 -44.350 1.00 57.41 O
TER
ATOM 1 O3' G B 488 46.888 -95.677 -38.791 1.00 56.50 O
ATOM 2 P U B 489 46.032 -96.617 -39.825 1.00 49.61 P
ATOM 3 OP1 U B 489 46.682 -96.830 -41.153 1.00 44.43 O
ATOM 4 OP2 U B 489 44.641 -96.119 -39.780 1.00 50.03 O
ATOM 5 O5' U B 489 45.930 -98.011 -39.060 1.00 43.82 O
ATOM 6 C5' U B 489 46.514 -98.181 -37.766 1.00 46.59 C
ATOM 7 C4' U B 489 45.921 -99.378 -37.087 1.00 51.08 C
ATOM 8 O4' U B 489 44.541 -99.103 -36.718 1.00 56.36 O
ATOM 9 C3' U B 489 45.869-100.609 -37.969 1.00 48.62 C
ATOM 10 O3' U B 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 11 C2' U B 489 44.696-101.387 -37.380 1.00 56.46 C
ATOM 12 O2' U B 489 45.103-102.125 -36.247 1.00 59.05 O
ATOM 13 C1' U B 489 43.755-100.258 -36.929 1.00 54.83 C
ATOM 14 N1 U B 489 42.678 -99.909 -37.873 1.00 58.47 N
ATOM 15 C2 U B 489 41.659-100.821 -38.111 1.00 62.41 C
ATOM 16 O2 U B 489 41.605-101.913 -37.578 1.00 65.30 O
ATOM 17 N3 U B 489 40.702-100.399 -38.999 1.00 61.99 N
ATOM 18 C4 U B 489 40.654 -99.187 -39.663 1.00 64.87 C
ATOM 19 O4 U B 489 39.697 -98.925 -40.408 1.00 68.75 O
ATOM 20 C5 U B 489 41.737 -98.313 -39.371 1.00 65.53 C
ATOM 21 C6 U B 489 42.685 -98.692 -38.511 1.00 62.12 C
ATOM 22 P G B 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 23 OP1 G B 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 24 OP2 G B 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 25 O5' G B 490 46.764-102.925 -39.791 1.00 54.35 O
TER
Atoms:
OP1: (49.031,-102.681,-38.820)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
C4: (40.654,-99.187,-39.663)
N3: (40.702,-100.399,-38.999)
OP1: (46.682,-96.830,-41.153)
OP2: (44.641,-96.119,-39.780)
C2: (41.659,-100.821,-38.111)
C1': (43.755,-100.258,-36.929)
C3': (45.869,-100.609,-37.969)
O5': (45.930,-98.011,-39.060)
O4': (44.541,-99.103,-36.718)
C5': (46.514,-98.181,-37.766)
P: (46.032,-96.617,-39.825)
C4': (45.921,-99.378,-37.087)
C2': (44.696,-101.387,-37.380)
O2': (45.103,-102.125,-36.247)
N1: (42.678,-99.909,-37.873)
O4: (39.697,-98.925,-40.408)
O2: (41.605,-101.913,-37.578)
C6: (42.685,-98.692,-38.511)
C5: (41.737,-98.313,-39.371)
O3': (47.112,-101.302,-37.876)
N3: (40.702,-100.399,-38.999)
OP1: (46.682,-96.830,-41.153)
OP2: (44.641,-96.119,-39.780)
C2: (41.659,-100.821,-38.111)
C1': (43.755,-100.258,-36.929)
C3': (45.869,-100.609,-37.969)
O5': (45.930,-98.011,-39.060)
O4': (44.541,-99.103,-36.718)
C5': (46.514,-98.181,-37.766)
P: (46.032,-96.617,-39.825)
C4': (45.921,-99.378,-37.087)
C2': (44.696,-101.387,-37.380)
O2': (45.103,-102.125,-36.247)
N1: (42.678,-99.909,-37.873)
O4: (39.697,-98.925,-40.408)
O2: (41.605,-101.913,-37.578)
C6: (42.685,-98.692,-38.511)
C5: (41.737,-98.313,-39.371)
O3': (47.112,-101.302,-37.876)
Image (generated by PyMOL):