Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:B61:B60
Extra
PDB:
ATOM 1 O3' U A 60 -3.971 -11.599 9.511 1.00 89.36 O
ATOM 2 P G A 61 -4.193 -12.622 10.723 1.00 87.69 P
ATOM 3 OP1 G A 61 -5.617 -13.029 10.681 1.00 87.93 O
ATOM 4 OP2 G A 61 -3.629 -12.025 11.957 1.00 87.18 O
ATOM 5 O5' G A 61 -3.263 -13.874 10.340 1.00 85.57 O
ATOM 6 C5' G A 61 -3.637 -14.796 9.313 1.00 83.41 C
ATOM 7 C4' G A 61 -2.484 -15.719 8.960 1.00 81.29 C
ATOM 8 O4' G A 61 -1.269 -14.958 8.732 1.00 81.36 O
ATOM 9 C3' G A 61 -2.045 -16.678 10.056 1.00 79.54 C
ATOM 10 O3' G A 61 -2.950 -17.747 10.249 1.00 77.10 O
ATOM 11 C2' G A 61 -0.681 -17.107 9.523 1.00 79.47 C
ATOM 12 O2' G A 61 -0.744 -17.966 8.402 1.00 79.40 O
ATOM 13 C1' G A 61 -0.146 -15.732 9.130 1.00 80.53 C
ATOM 14 N9 G A 61 0.547 -15.097 10.253 1.00 80.83 N
ATOM 15 C8 G A 61 -0.004 -14.323 11.250 1.00 81.51 C
ATOM 16 N7 G A 61 0.862 -13.905 12.131 1.00 81.67 N
ATOM 17 C5 G A 61 2.068 -14.440 11.695 1.00 80.89 C
ATOM 18 C6 G A 61 3.367 -14.327 12.249 1.00 80.66 C
ATOM 19 O6 G A 61 3.711 -13.707 13.266 1.00 81.17 O
ATOM 20 N1 G A 61 4.318 -15.021 11.497 1.00 79.89 N
ATOM 21 C2 G A 61 4.043 -15.736 10.352 1.00 79.62 C
ATOM 22 N2 G A 61 5.081 -16.342 9.760 1.00 79.31 N
ATOM 23 N3 G A 61 2.830 -15.849 9.824 1.00 79.85 N
ATOM 24 C4 G A 61 1.892 -15.179 10.543 1.00 80.47 C
ATOM 25 P A A 62 -3.680 -17.865 11.669 1.00 75.06 P
ATOM 26 OP1 A A 62 -4.839 -16.947 11.665 1.00 75.89 O
ATOM 27 OP2 A A 62 -2.661 -17.767 12.740 1.00 74.61 O
ATOM 28 O5' A A 62 -4.223 -19.362 11.648 1.00 73.08 O
TER
ATOM 1 O3' G B 59 -1.003 -6.744 11.776 1.00 98.72 O
ATOM 2 P U B 60 -1.581 -8.125 12.344 1.00 97.21 P
ATOM 3 OP1 U B 60 -2.934 -7.855 12.886 1.00 97.35 O
ATOM 4 OP2 U B 60 -0.551 -8.748 13.212 1.00 96.26 O
ATOM 5 O5' U B 60 -1.703 -9.015 11.017 1.00 95.60 O
ATOM 6 C5' U B 60 -2.699 -8.713 10.041 1.00 94.49 C
ATOM 7 C4' U B 60 -2.619 -9.670 8.868 1.00 92.71 C
ATOM 8 O4' U B 60 -1.329 -9.535 8.218 1.00 92.36 O
ATOM 9 C3' U B 60 -2.657 -11.147 9.224 1.00 90.73 C
ATOM 10 O3' U B 60 -3.971 -11.599 9.511 1.00 89.36 O
ATOM 11 C2' U B 60 -2.077 -11.763 7.954 1.00 90.48 C
ATOM 12 O2' U B 60 -2.982 -11.779 6.864 1.00 90.76 O
ATOM 13 C1' U B 60 -0.927 -10.793 7.693 1.00 90.93 C
ATOM 14 N1 U B 60 0.387 -11.225 8.300 1.00 89.85 N
ATOM 15 C2 U B 60 1.190 -12.119 7.606 1.00 89.14 C
ATOM 16 O2 U B 60 0.898 -12.590 6.517 1.00 89.10 O
ATOM 17 N3 U B 60 2.368 -12.451 8.239 1.00 88.40 N
ATOM 18 C4 U B 60 2.817 -11.994 9.468 1.00 88.45 C
ATOM 19 O4 U B 60 3.898 -12.379 9.904 1.00 88.02 O
ATOM 20 C5 U B 60 1.931 -11.069 10.133 1.00 89.11 C
ATOM 21 C6 U B 60 0.780 -10.728 9.536 1.00 89.74 C
ATOM 22 P G B 61 -4.193 -12.622 10.723 1.00 87.69 P
ATOM 23 OP1 G B 61 -5.617 -13.029 10.681 1.00 87.93 O
ATOM 24 OP2 G B 61 -3.629 -12.025 11.957 1.00 87.18 O
ATOM 25 O5' G B 61 -3.263 -13.874 10.340 1.00 85.57 O
TER
ATOM 2 P G A 61 -4.193 -12.622 10.723 1.00 87.69 P
ATOM 3 OP1 G A 61 -5.617 -13.029 10.681 1.00 87.93 O
ATOM 4 OP2 G A 61 -3.629 -12.025 11.957 1.00 87.18 O
ATOM 5 O5' G A 61 -3.263 -13.874 10.340 1.00 85.57 O
ATOM 6 C5' G A 61 -3.637 -14.796 9.313 1.00 83.41 C
ATOM 7 C4' G A 61 -2.484 -15.719 8.960 1.00 81.29 C
ATOM 8 O4' G A 61 -1.269 -14.958 8.732 1.00 81.36 O
ATOM 9 C3' G A 61 -2.045 -16.678 10.056 1.00 79.54 C
ATOM 10 O3' G A 61 -2.950 -17.747 10.249 1.00 77.10 O
ATOM 11 C2' G A 61 -0.681 -17.107 9.523 1.00 79.47 C
ATOM 12 O2' G A 61 -0.744 -17.966 8.402 1.00 79.40 O
ATOM 13 C1' G A 61 -0.146 -15.732 9.130 1.00 80.53 C
ATOM 14 N9 G A 61 0.547 -15.097 10.253 1.00 80.83 N
ATOM 15 C8 G A 61 -0.004 -14.323 11.250 1.00 81.51 C
ATOM 16 N7 G A 61 0.862 -13.905 12.131 1.00 81.67 N
ATOM 17 C5 G A 61 2.068 -14.440 11.695 1.00 80.89 C
ATOM 18 C6 G A 61 3.367 -14.327 12.249 1.00 80.66 C
ATOM 19 O6 G A 61 3.711 -13.707 13.266 1.00 81.17 O
ATOM 20 N1 G A 61 4.318 -15.021 11.497 1.00 79.89 N
ATOM 21 C2 G A 61 4.043 -15.736 10.352 1.00 79.62 C
ATOM 22 N2 G A 61 5.081 -16.342 9.760 1.00 79.31 N
ATOM 23 N3 G A 61 2.830 -15.849 9.824 1.00 79.85 N
ATOM 24 C4 G A 61 1.892 -15.179 10.543 1.00 80.47 C
ATOM 25 P A A 62 -3.680 -17.865 11.669 1.00 75.06 P
ATOM 26 OP1 A A 62 -4.839 -16.947 11.665 1.00 75.89 O
ATOM 27 OP2 A A 62 -2.661 -17.767 12.740 1.00 74.61 O
ATOM 28 O5' A A 62 -4.223 -19.362 11.648 1.00 73.08 O
TER
ATOM 1 O3' G B 59 -1.003 -6.744 11.776 1.00 98.72 O
ATOM 2 P U B 60 -1.581 -8.125 12.344 1.00 97.21 P
ATOM 3 OP1 U B 60 -2.934 -7.855 12.886 1.00 97.35 O
ATOM 4 OP2 U B 60 -0.551 -8.748 13.212 1.00 96.26 O
ATOM 5 O5' U B 60 -1.703 -9.015 11.017 1.00 95.60 O
ATOM 6 C5' U B 60 -2.699 -8.713 10.041 1.00 94.49 C
ATOM 7 C4' U B 60 -2.619 -9.670 8.868 1.00 92.71 C
ATOM 8 O4' U B 60 -1.329 -9.535 8.218 1.00 92.36 O
ATOM 9 C3' U B 60 -2.657 -11.147 9.224 1.00 90.73 C
ATOM 10 O3' U B 60 -3.971 -11.599 9.511 1.00 89.36 O
ATOM 11 C2' U B 60 -2.077 -11.763 7.954 1.00 90.48 C
ATOM 12 O2' U B 60 -2.982 -11.779 6.864 1.00 90.76 O
ATOM 13 C1' U B 60 -0.927 -10.793 7.693 1.00 90.93 C
ATOM 14 N1 U B 60 0.387 -11.225 8.300 1.00 89.85 N
ATOM 15 C2 U B 60 1.190 -12.119 7.606 1.00 89.14 C
ATOM 16 O2 U B 60 0.898 -12.590 6.517 1.00 89.10 O
ATOM 17 N3 U B 60 2.368 -12.451 8.239 1.00 88.40 N
ATOM 18 C4 U B 60 2.817 -11.994 9.468 1.00 88.45 C
ATOM 19 O4 U B 60 3.898 -12.379 9.904 1.00 88.02 O
ATOM 20 C5 U B 60 1.931 -11.069 10.133 1.00 89.11 C
ATOM 21 C6 U B 60 0.780 -10.728 9.536 1.00 89.74 C
ATOM 22 P G B 61 -4.193 -12.622 10.723 1.00 87.69 P
ATOM 23 OP1 G B 61 -5.617 -13.029 10.681 1.00 87.93 O
ATOM 24 OP2 G B 61 -3.629 -12.025 11.957 1.00 87.18 O
ATOM 25 O5' G B 61 -3.263 -13.874 10.340 1.00 85.57 O
TER
Atoms:
OP1: (-5.617,-13.029,10.681)
OP2: (-3.629,-12.025,11.957)
C3': (-2.045,-16.678,10.056)
C1': (-0.146,-15.732,9.130)
C5': (-3.637,-14.796,9.313)
O6: (3.711,-13.707,13.266)
O4': (-1.269,-14.958,8.732)
C8: (-0.004,-14.323,11.250)
C2: (4.043,-15.736,10.352)
C6: (3.367,-14.327,12.249)
C5: (2.068,-14.440,11.695)
C4: (1.892,-15.179,10.543)
P: (-4.193,-12.622,10.723)
C4': (-2.484,-15.719,8.960)
C2': (-0.681,-17.107,9.523)
O2': (-0.744,-17.966,8.402)
N1: (4.318,-15.021,11.497)
N2: (5.081,-16.342,9.760)
N3: (2.830,-15.849,9.824)
N7: (0.862,-13.905,12.131)
N9: (0.547,-15.097,10.253)
O5': (-3.263,-13.874,10.340)
O3': (-2.950,-17.747,10.249)
OP2: (-3.629,-12.025,11.957)
C3': (-2.045,-16.678,10.056)
C1': (-0.146,-15.732,9.130)
C5': (-3.637,-14.796,9.313)
O6: (3.711,-13.707,13.266)
O4': (-1.269,-14.958,8.732)
C8: (-0.004,-14.323,11.250)
C2: (4.043,-15.736,10.352)
C6: (3.367,-14.327,12.249)
C5: (2.068,-14.440,11.695)
C4: (1.892,-15.179,10.543)
P: (-4.193,-12.622,10.723)
C4': (-2.484,-15.719,8.960)
C2': (-0.681,-17.107,9.523)
O2': (-0.744,-17.966,8.402)
N1: (4.318,-15.021,11.497)
N2: (5.081,-16.342,9.760)
N3: (2.830,-15.849,9.824)
N7: (0.862,-13.905,12.131)
N9: (0.547,-15.097,10.253)
O5': (-3.263,-13.874,10.340)
O3': (-2.950,-17.747,10.249)
C4: (2.817,-11.994,9.468)
N3: (2.368,-12.451,8.239)
OP1: (-2.934,-7.855,12.886)
OP2: (-0.551,-8.748,13.212)
C2: (1.190,-12.119,7.606)
C1': (-0.927,-10.793,7.693)
C3': (-2.657,-11.147,9.224)
O5': (-1.703,-9.015,11.017)
O4': (-1.329,-9.535,8.218)
C5': (-2.699,-8.713,10.041)
P: (-1.581,-8.125,12.344)
C4': (-2.619,-9.670,8.868)
C2': (-2.077,-11.763,7.954)
O2': (-2.982,-11.779,6.864)
N1: (0.387,-11.225,8.300)
O4: (3.898,-12.379,9.904)
O2: (0.898,-12.590,6.517)
C6: (0.780,-10.728,9.536)
C5: (1.931,-11.069,10.133)
O3': (-3.971,-11.599,9.511)
N3: (2.368,-12.451,8.239)
OP1: (-2.934,-7.855,12.886)
OP2: (-0.551,-8.748,13.212)
C2: (1.190,-12.119,7.606)
C1': (-0.927,-10.793,7.693)
C3': (-2.657,-11.147,9.224)
O5': (-1.703,-9.015,11.017)
O4': (-1.329,-9.535,8.218)
C5': (-2.699,-8.713,10.041)
P: (-1.581,-8.125,12.344)
C4': (-2.619,-9.670,8.868)
C2': (-2.077,-11.763,7.954)
O2': (-2.982,-11.779,6.864)
N1: (0.387,-11.225,8.300)
O4: (3.898,-12.379,9.904)
O2: (0.898,-12.590,6.517)
C6: (0.780,-10.728,9.536)
C5: (1.931,-11.069,10.133)
O3': (-3.971,-11.599,9.511)
Image (generated by PyMOL):