Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0257:0256
Extra
PDB:
ATOM 1 O3' U A 256 80.308 108.251 -4.486 1.00 59.81 O
ATOM 2 P G A 257 78.994 107.913 -3.624 1.00 60.40 P
ATOM 3 OP1 G A 257 78.142 106.988 -4.419 1.00 60.06 O
ATOM 4 OP2 G A 257 78.420 109.193 -3.131 1.00 60.57 O
ATOM 5 O5' G A 257 79.566 107.104 -2.381 1.00 58.61 O
ATOM 6 C5' G A 257 80.384 105.941 -2.572 1.00 57.27 C
ATOM 7 C4' G A 257 81.042 105.567 -1.270 1.00 59.40 C
ATOM 8 O4' G A 257 82.052 106.555 -0.930 1.00 58.63 O
ATOM 9 C3' G A 257 80.097 105.547 -0.080 1.00 58.79 C
ATOM 10 O3' G A 257 79.412 104.300 -0.009 1.00 60.52 O
ATOM 11 C2' G A 257 81.036 105.811 1.092 1.00 58.09 C
ATOM 12 O2' G A 257 81.741 104.654 1.514 1.00 58.54 O
ATOM 13 C1' G A 257 82.021 106.807 0.464 1.00 55.44 C
ATOM 14 N9 G A 257 81.681 108.216 0.651 1.00 50.51 N
ATOM 15 C8 G A 257 80.611 108.897 0.114 1.00 48.77 C
ATOM 16 N7 G A 257 80.588 110.158 0.450 1.00 47.14 N
ATOM 17 C5 G A 257 81.705 110.319 1.260 1.00 44.87 C
ATOM 18 C6 G A 257 82.197 111.465 1.924 1.00 43.73 C
ATOM 19 O6 G A 257 81.735 112.610 1.927 1.00 43.66 O
ATOM 20 N1 G A 257 83.349 111.182 2.643 1.00 41.45 N
ATOM 21 C2 G A 257 83.955 109.955 2.713 1.00 43.29 C
ATOM 22 N2 G A 257 85.063 109.876 3.468 1.00 43.22 N
ATOM 23 N3 G A 257 83.510 108.879 2.095 1.00 44.07 N
ATOM 24 C4 G A 257 82.388 109.131 1.394 1.00 46.18 C
ATOM 25 P U A 258 77.933 104.230 0.614 1.00 60.87 P
ATOM 26 OP1 U A 258 77.290 102.983 0.125 1.00 61.32 O
ATOM 27 OP2 U A 258 77.259 105.537 0.391 1.00 59.19 O
ATOM 28 O5' U A 258 78.216 104.052 2.170 1.00 62.00 O
TER
ATOM 1 O3' G B 255 80.788 114.442 -4.940 1.00 62.02 O
ATOM 2 P U B 256 79.939 113.467 -3.994 1.00 62.63 P
ATOM 3 OP1 U B 256 78.592 113.294 -4.602 1.00 61.50 O
ATOM 4 OP2 U B 256 80.056 114.009 -2.607 1.00 62.70 O
ATOM 5 O5' U B 256 80.745 112.092 -4.056 1.00 59.51 O
ATOM 6 C5' U B 256 80.862 111.357 -5.288 1.00 58.09 C
ATOM 7 C4' U B 256 81.723 110.130 -5.089 1.00 57.85 C
ATOM 8 O4' U B 256 83.060 110.539 -4.709 1.00 56.51 O
ATOM 9 C3' U B 256 81.274 109.180 -3.987 1.00 58.02 C
ATOM 10 O3' U B 256 80.308 108.251 -4.486 1.00 59.81 O
ATOM 11 C2' U B 256 82.573 108.482 -3.599 1.00 57.39 C
ATOM 12 O2' U B 256 82.901 107.412 -4.458 1.00 56.19 O
ATOM 13 C1' U B 256 83.595 109.609 -3.783 1.00 56.64 C
ATOM 14 N1 U B 256 83.944 110.330 -2.548 1.00 55.44 N
ATOM 15 C2 U B 256 84.966 109.813 -1.769 1.00 55.29 C
ATOM 16 O2 U B 256 85.557 108.778 -2.043 1.00 55.44 O
ATOM 17 N3 U B 256 85.273 110.552 -0.652 1.00 55.35 N
ATOM 18 C4 U B 256 84.674 111.722 -0.237 1.00 55.26 C
ATOM 19 O4 U B 256 85.110 112.303 0.758 1.00 55.83 O
ATOM 20 C5 U B 256 83.610 112.181 -1.081 1.00 55.30 C
ATOM 21 C6 U B 256 83.289 111.489 -2.179 1.00 55.61 C
ATOM 22 P G B 257 78.994 107.913 -3.624 1.00 60.40 P
ATOM 23 OP1 G B 257 78.142 106.988 -4.419 1.00 60.06 O
ATOM 24 OP2 G B 257 78.420 109.193 -3.131 1.00 60.57 O
ATOM 25 O5' G B 257 79.566 107.104 -2.381 1.00 58.61 O
TER
ATOM 2 P G A 257 78.994 107.913 -3.624 1.00 60.40 P
ATOM 3 OP1 G A 257 78.142 106.988 -4.419 1.00 60.06 O
ATOM 4 OP2 G A 257 78.420 109.193 -3.131 1.00 60.57 O
ATOM 5 O5' G A 257 79.566 107.104 -2.381 1.00 58.61 O
ATOM 6 C5' G A 257 80.384 105.941 -2.572 1.00 57.27 C
ATOM 7 C4' G A 257 81.042 105.567 -1.270 1.00 59.40 C
ATOM 8 O4' G A 257 82.052 106.555 -0.930 1.00 58.63 O
ATOM 9 C3' G A 257 80.097 105.547 -0.080 1.00 58.79 C
ATOM 10 O3' G A 257 79.412 104.300 -0.009 1.00 60.52 O
ATOM 11 C2' G A 257 81.036 105.811 1.092 1.00 58.09 C
ATOM 12 O2' G A 257 81.741 104.654 1.514 1.00 58.54 O
ATOM 13 C1' G A 257 82.021 106.807 0.464 1.00 55.44 C
ATOM 14 N9 G A 257 81.681 108.216 0.651 1.00 50.51 N
ATOM 15 C8 G A 257 80.611 108.897 0.114 1.00 48.77 C
ATOM 16 N7 G A 257 80.588 110.158 0.450 1.00 47.14 N
ATOM 17 C5 G A 257 81.705 110.319 1.260 1.00 44.87 C
ATOM 18 C6 G A 257 82.197 111.465 1.924 1.00 43.73 C
ATOM 19 O6 G A 257 81.735 112.610 1.927 1.00 43.66 O
ATOM 20 N1 G A 257 83.349 111.182 2.643 1.00 41.45 N
ATOM 21 C2 G A 257 83.955 109.955 2.713 1.00 43.29 C
ATOM 22 N2 G A 257 85.063 109.876 3.468 1.00 43.22 N
ATOM 23 N3 G A 257 83.510 108.879 2.095 1.00 44.07 N
ATOM 24 C4 G A 257 82.388 109.131 1.394 1.00 46.18 C
ATOM 25 P U A 258 77.933 104.230 0.614 1.00 60.87 P
ATOM 26 OP1 U A 258 77.290 102.983 0.125 1.00 61.32 O
ATOM 27 OP2 U A 258 77.259 105.537 0.391 1.00 59.19 O
ATOM 28 O5' U A 258 78.216 104.052 2.170 1.00 62.00 O
TER
ATOM 1 O3' G B 255 80.788 114.442 -4.940 1.00 62.02 O
ATOM 2 P U B 256 79.939 113.467 -3.994 1.00 62.63 P
ATOM 3 OP1 U B 256 78.592 113.294 -4.602 1.00 61.50 O
ATOM 4 OP2 U B 256 80.056 114.009 -2.607 1.00 62.70 O
ATOM 5 O5' U B 256 80.745 112.092 -4.056 1.00 59.51 O
ATOM 6 C5' U B 256 80.862 111.357 -5.288 1.00 58.09 C
ATOM 7 C4' U B 256 81.723 110.130 -5.089 1.00 57.85 C
ATOM 8 O4' U B 256 83.060 110.539 -4.709 1.00 56.51 O
ATOM 9 C3' U B 256 81.274 109.180 -3.987 1.00 58.02 C
ATOM 10 O3' U B 256 80.308 108.251 -4.486 1.00 59.81 O
ATOM 11 C2' U B 256 82.573 108.482 -3.599 1.00 57.39 C
ATOM 12 O2' U B 256 82.901 107.412 -4.458 1.00 56.19 O
ATOM 13 C1' U B 256 83.595 109.609 -3.783 1.00 56.64 C
ATOM 14 N1 U B 256 83.944 110.330 -2.548 1.00 55.44 N
ATOM 15 C2 U B 256 84.966 109.813 -1.769 1.00 55.29 C
ATOM 16 O2 U B 256 85.557 108.778 -2.043 1.00 55.44 O
ATOM 17 N3 U B 256 85.273 110.552 -0.652 1.00 55.35 N
ATOM 18 C4 U B 256 84.674 111.722 -0.237 1.00 55.26 C
ATOM 19 O4 U B 256 85.110 112.303 0.758 1.00 55.83 O
ATOM 20 C5 U B 256 83.610 112.181 -1.081 1.00 55.30 C
ATOM 21 C6 U B 256 83.289 111.489 -2.179 1.00 55.61 C
ATOM 22 P G B 257 78.994 107.913 -3.624 1.00 60.40 P
ATOM 23 OP1 G B 257 78.142 106.988 -4.419 1.00 60.06 O
ATOM 24 OP2 G B 257 78.420 109.193 -3.131 1.00 60.57 O
ATOM 25 O5' G B 257 79.566 107.104 -2.381 1.00 58.61 O
TER
Atoms:
OP1: (78.142,106.988,-4.419)
OP2: (78.420,109.193,-3.131)
C3': (80.097,105.547,-0.080)
C1': (82.021,106.807,0.464)
C5': (80.384,105.941,-2.572)
O6: (81.735,112.610,1.927)
O4': (82.052,106.555,-0.930)
C8: (80.611,108.897,0.114)
C2: (83.955,109.955,2.713)
C6: (82.197,111.465,1.924)
C5: (81.705,110.319,1.260)
C4: (82.388,109.131,1.394)
P: (78.994,107.913,-3.624)
C4': (81.042,105.567,-1.270)
C2': (81.036,105.811,1.092)
O2': (81.741,104.654,1.514)
N1: (83.349,111.182,2.643)
N2: (85.063,109.876,3.468)
N3: (83.510,108.879,2.095)
N7: (80.588,110.158,0.450)
N9: (81.681,108.216,0.651)
O5': (79.566,107.104,-2.381)
O3': (79.412,104.300,-0.009)
OP2: (78.420,109.193,-3.131)
C3': (80.097,105.547,-0.080)
C1': (82.021,106.807,0.464)
C5': (80.384,105.941,-2.572)
O6: (81.735,112.610,1.927)
O4': (82.052,106.555,-0.930)
C8: (80.611,108.897,0.114)
C2: (83.955,109.955,2.713)
C6: (82.197,111.465,1.924)
C5: (81.705,110.319,1.260)
C4: (82.388,109.131,1.394)
P: (78.994,107.913,-3.624)
C4': (81.042,105.567,-1.270)
C2': (81.036,105.811,1.092)
O2': (81.741,104.654,1.514)
N1: (83.349,111.182,2.643)
N2: (85.063,109.876,3.468)
N3: (83.510,108.879,2.095)
N7: (80.588,110.158,0.450)
N9: (81.681,108.216,0.651)
O5': (79.566,107.104,-2.381)
O3': (79.412,104.300,-0.009)
C4: (84.674,111.722,-0.237)
N3: (85.273,110.552,-0.652)
OP1: (78.592,113.294,-4.602)
OP2: (80.056,114.009,-2.607)
C2: (84.966,109.813,-1.769)
C1': (83.595,109.609,-3.783)
C3': (81.274,109.180,-3.987)
O5': (80.745,112.092,-4.056)
O4': (83.060,110.539,-4.709)
C5': (80.862,111.357,-5.288)
P: (79.939,113.467,-3.994)
C4': (81.723,110.130,-5.089)
C2': (82.573,108.482,-3.599)
O2': (82.901,107.412,-4.458)
N1: (83.944,110.330,-2.548)
O4: (85.110,112.303,0.758)
O2: (85.557,108.778,-2.043)
C6: (83.289,111.489,-2.179)
C5: (83.610,112.181,-1.081)
O3': (80.308,108.251,-4.486)
N3: (85.273,110.552,-0.652)
OP1: (78.592,113.294,-4.602)
OP2: (80.056,114.009,-2.607)
C2: (84.966,109.813,-1.769)
C1': (83.595,109.609,-3.783)
C3': (81.274,109.180,-3.987)
O5': (80.745,112.092,-4.056)
O4': (83.060,110.539,-4.709)
C5': (80.862,111.357,-5.288)
P: (79.939,113.467,-3.994)
C4': (81.723,110.130,-5.089)
C2': (82.573,108.482,-3.599)
O2': (82.901,107.412,-4.458)
N1: (83.944,110.330,-2.548)
O4: (85.110,112.303,0.758)
O2: (85.557,108.778,-2.043)
C6: (83.289,111.489,-2.179)
C5: (83.610,112.181,-1.081)
O3': (80.308,108.251,-4.486)
Image (generated by PyMOL):