Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:054:053
Extra
PDB:
ATOM 1 O3' U A 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 2 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 3 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 4 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 5 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
ATOM 6 C5' G A 54 51.113 150.012 35.063 1.00 51.30 C
ATOM 7 C4' G A 54 50.895 151.337 34.378 1.00 51.37 C
ATOM 8 O4' G A 54 50.590 152.371 35.347 1.00 52.80 O
ATOM 9 C3' G A 54 52.091 151.894 33.644 1.00 51.21 C
ATOM 10 O3' G A 54 52.252 151.284 32.389 1.00 51.61 O
ATOM 11 C2' G A 54 51.743 153.368 33.522 1.00 52.18 C
ATOM 12 O2' G A 54 50.825 153.635 32.482 1.00 52.31 O
ATOM 13 C1' G A 54 51.076 153.621 34.872 1.00 52.72 C
ATOM 14 N9 G A 54 51.984 154.181 35.869 1.00 53.18 N
ATOM 15 C8 G A 54 52.485 153.548 36.978 1.00 53.98 C
ATOM 16 N7 G A 54 53.231 154.321 37.715 1.00 55.07 N
ATOM 17 C5 G A 54 53.232 155.536 37.048 1.00 54.73 C
ATOM 18 C6 G A 54 53.855 156.761 37.382 1.00 55.82 C
ATOM 19 O6 G A 54 54.550 157.026 38.372 1.00 57.10 O
ATOM 20 N1 G A 54 53.601 157.739 36.427 1.00 54.69 N
ATOM 21 C2 G A 54 52.848 157.561 35.299 1.00 53.58 C
ATOM 22 N2 G A 54 52.736 158.620 34.496 1.00 51.91 N
ATOM 23 N3 G A 54 52.251 156.426 34.981 1.00 54.13 N
ATOM 24 C4 G A 54 52.482 155.462 35.897 1.00 53.75 C
ATOM 25 P C A 55 53.726 150.978 31.865 1.00 51.88 P
ATOM 26 OP1 C A 55 53.610 150.169 30.633 1.00 53.96 O
ATOM 27 OP2 C A 55 54.471 150.437 33.030 1.00 52.88 O
ATOM 28 O5' C A 55 54.302 152.418 31.491 1.00 53.60 O
TER
ATOM 1 O3' C B 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 2 P U B 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U B 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U B 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U B 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U B 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U B 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U B 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U B 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U B 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U B 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U B 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U B 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U B 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U B 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U B 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U B 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U B 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U B 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U B 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U B 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G B 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G B 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G B 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G B 54 52.250 150.076 35.937 1.00 53.12 O
TER
ATOM 2 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 3 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 4 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 5 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
ATOM 6 C5' G A 54 51.113 150.012 35.063 1.00 51.30 C
ATOM 7 C4' G A 54 50.895 151.337 34.378 1.00 51.37 C
ATOM 8 O4' G A 54 50.590 152.371 35.347 1.00 52.80 O
ATOM 9 C3' G A 54 52.091 151.894 33.644 1.00 51.21 C
ATOM 10 O3' G A 54 52.252 151.284 32.389 1.00 51.61 O
ATOM 11 C2' G A 54 51.743 153.368 33.522 1.00 52.18 C
ATOM 12 O2' G A 54 50.825 153.635 32.482 1.00 52.31 O
ATOM 13 C1' G A 54 51.076 153.621 34.872 1.00 52.72 C
ATOM 14 N9 G A 54 51.984 154.181 35.869 1.00 53.18 N
ATOM 15 C8 G A 54 52.485 153.548 36.978 1.00 53.98 C
ATOM 16 N7 G A 54 53.231 154.321 37.715 1.00 55.07 N
ATOM 17 C5 G A 54 53.232 155.536 37.048 1.00 54.73 C
ATOM 18 C6 G A 54 53.855 156.761 37.382 1.00 55.82 C
ATOM 19 O6 G A 54 54.550 157.026 38.372 1.00 57.10 O
ATOM 20 N1 G A 54 53.601 157.739 36.427 1.00 54.69 N
ATOM 21 C2 G A 54 52.848 157.561 35.299 1.00 53.58 C
ATOM 22 N2 G A 54 52.736 158.620 34.496 1.00 51.91 N
ATOM 23 N3 G A 54 52.251 156.426 34.981 1.00 54.13 N
ATOM 24 C4 G A 54 52.482 155.462 35.897 1.00 53.75 C
ATOM 25 P C A 55 53.726 150.978 31.865 1.00 51.88 P
ATOM 26 OP1 C A 55 53.610 150.169 30.633 1.00 53.96 O
ATOM 27 OP2 C A 55 54.471 150.437 33.030 1.00 52.88 O
ATOM 28 O5' C A 55 54.302 152.418 31.491 1.00 53.60 O
TER
ATOM 1 O3' C B 52 51.815 149.636 43.958 1.00 54.09 O
ATOM 2 P U B 53 52.743 149.496 42.652 1.00 57.11 P
ATOM 3 OP1 U B 53 53.100 148.060 42.531 1.00 57.67 O
ATOM 4 OP2 U B 53 53.822 150.513 42.688 1.00 57.69 O
ATOM 5 O5' U B 53 51.766 149.873 41.453 1.00 56.24 O
ATOM 6 C5' U B 53 50.716 148.979 41.049 1.00 53.98 C
ATOM 7 C4' U B 53 49.946 149.568 39.894 1.00 53.00 C
ATOM 8 O4' U B 53 49.300 150.794 40.323 1.00 52.68 O
ATOM 9 C3' U B 53 50.782 150.001 38.705 1.00 52.21 C
ATOM 10 O3' U B 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 11 C2' U B 53 49.877 151.013 38.032 1.00 52.62 C
ATOM 12 O2' U B 53 48.847 150.375 37.312 1.00 54.00 O
ATOM 13 C1' U B 53 49.282 151.721 39.250 1.00 53.40 C
ATOM 14 N1 U B 53 50.037 152.919 39.655 1.00 53.81 N
ATOM 15 C2 U B 53 49.667 154.129 39.099 1.00 53.24 C
ATOM 16 O2 U B 53 48.753 154.238 38.299 1.00 53.15 O
ATOM 17 N3 U B 53 50.410 155.210 39.513 1.00 52.26 N
ATOM 18 C4 U B 53 51.461 155.204 40.403 1.00 52.18 C
ATOM 19 O4 U B 53 52.018 156.263 40.687 1.00 51.71 O
ATOM 20 C5 U B 53 51.785 153.919 40.937 1.00 53.35 C
ATOM 21 C6 U B 53 51.081 152.847 40.557 1.00 54.44 C
ATOM 22 P G B 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 23 OP1 G B 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 24 OP2 G B 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 25 O5' G B 54 52.250 150.076 35.937 1.00 53.12 O
TER
Atoms:
OP1: (52.626,147.654,36.343)
OP2: (53.546,149.398,37.979)
C3': (52.091,151.894,33.644)
C1': (51.076,153.621,34.872)
C5': (51.113,150.012,35.063)
O6: (54.550,157.026,38.372)
O4': (50.590,152.371,35.347)
C8: (52.485,153.548,36.978)
C2: (52.848,157.561,35.299)
C6: (53.855,156.761,37.382)
C5: (53.232,155.536,37.048)
C4: (52.482,155.462,35.897)
P: (52.483,148.950,37.041)
C4': (50.895,151.337,34.378)
C2': (51.743,153.368,33.522)
O2': (50.825,153.635,32.482)
N1: (53.601,157.739,36.427)
N2: (52.736,158.620,34.496)
N3: (52.251,156.426,34.981)
N7: (53.231,154.321,37.715)
N9: (51.984,154.181,35.869)
O5': (52.250,150.076,35.937)
O3': (52.252,151.284,32.389)
OP2: (53.546,149.398,37.979)
C3': (52.091,151.894,33.644)
C1': (51.076,153.621,34.872)
C5': (51.113,150.012,35.063)
O6: (54.550,157.026,38.372)
O4': (50.590,152.371,35.347)
C8: (52.485,153.548,36.978)
C2: (52.848,157.561,35.299)
C6: (53.855,156.761,37.382)
C5: (53.232,155.536,37.048)
C4: (52.482,155.462,35.897)
P: (52.483,148.950,37.041)
C4': (50.895,151.337,34.378)
C2': (51.743,153.368,33.522)
O2': (50.825,153.635,32.482)
N1: (53.601,157.739,36.427)
N2: (52.736,158.620,34.496)
N3: (52.251,156.426,34.981)
N7: (53.231,154.321,37.715)
N9: (51.984,154.181,35.869)
O5': (52.250,150.076,35.937)
O3': (52.252,151.284,32.389)
C4: (51.461,155.204,40.403)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
N3: (50.410,155.210,39.513)
OP1: (53.100,148.060,42.531)
OP2: (53.822,150.513,42.688)
C2: (49.667,154.129,39.099)
C1': (49.282,151.721,39.250)
C3': (50.782,150.001,38.705)
O5': (51.766,149.873,41.453)
O4': (49.300,150.794,40.323)
C5': (50.716,148.979,41.049)
P: (52.743,149.496,42.652)
C4': (49.946,149.568,39.894)
C2': (49.877,151.013,38.032)
O2': (48.847,150.375,37.312)
N1: (50.037,152.919,39.655)
O4: (52.018,156.263,40.687)
O2: (48.753,154.238,38.299)
C6: (51.081,152.847,40.557)
C5: (51.785,153.919,40.937)
O3': (51.100,148.922,37.851)
Image (generated by PyMOL):