Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2560:2559
Extra
PDB:
ATOM 1 O3' U A 559 -78.039 -2.643 31.197 1.00102.75 O
ATOM 2 P G A 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 3 OP1 G A 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 4 OP2 G A 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 5 O5' G A 560 -75.544 -2.788 31.211 1.00 89.42 O
ATOM 6 C5' G A 560 -75.077 -2.774 29.863 1.00 90.07 C
ATOM 7 C4' G A 560 -74.105 -1.635 29.577 1.00 89.20 C
ATOM 8 O4' G A 560 -74.626 -0.373 30.072 1.00 88.75 O
ATOM 9 C3' G A 560 -72.722 -1.710 30.214 1.00 87.83 C
ATOM 10 O3' G A 560 -71.854 -2.636 29.584 1.00 88.05 O
ATOM 11 C2' G A 560 -72.263 -0.271 30.083 1.00 87.12 C
ATOM 12 O2' G A 560 -71.965 0.032 28.730 1.00 87.81 O
ATOM 13 C1' G A 560 -73.544 0.460 30.464 1.00 87.45 C
ATOM 14 N9 G A 560 -73.615 0.674 31.919 1.00 86.39 N
ATOM 15 C8 G A 560 -74.494 0.117 32.830 1.00 86.53 C
ATOM 16 N7 G A 560 -74.273 0.500 34.071 1.00 85.40 N
ATOM 17 C5 G A 560 -73.150 1.350 33.976 1.00 84.43 C
ATOM 18 C6 G A 560 -72.415 2.074 34.964 1.00 83.05 C
ATOM 19 O6 G A 560 -72.603 2.114 36.173 1.00 82.37 O
ATOM 20 N1 G A 560 -71.362 2.801 34.425 1.00 82.50 N
ATOM 21 C2 G A 560 -71.029 2.842 33.095 1.00 83.17 C
ATOM 22 N2 G A 560 -69.984 3.591 32.727 1.00 82.53 N
ATOM 23 N3 G A 560 -71.692 2.184 32.168 1.00 84.45 N
ATOM 24 C4 G A 560 -72.736 1.460 32.655 1.00 85.03 C
ATOM 25 P G A 561 -70.941 -3.631 30.470 1.00 88.80 P
ATOM 26 OP1 G A 561 -70.470 -4.704 29.556 1.00 89.58 O
ATOM 27 OP2 G A 561 -71.740 -4.018 31.659 1.00 88.62 O
ATOM 28 O5' G A 561 -69.706 -2.697 30.926 1.00 87.34 O
TER
ATOM 1 O3' C B 558 -81.942 -1.409 35.402 1.00145.99 O
ATOM 2 P U B 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 3 OP1 U B 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 4 OP2 U B 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 5 O5' U B 559 -79.922 -2.088 34.120 1.00101.89 O
ATOM 6 C5' U B 559 -80.590 -1.807 32.908 1.00103.13 C
ATOM 7 C4' U B 559 -79.713 -1.068 31.952 1.00102.89 C
ATOM 8 O4' U B 559 -79.664 0.326 32.316 1.00102.12 O
ATOM 9 C3' U B 559 -78.265 -1.488 31.942 1.00101.97 C
ATOM 10 O3' U B 559 -78.039 -2.643 31.197 1.00102.75 O
ATOM 11 C2' U B 559 -77.582 -0.267 31.379 1.00101.45 C
ATOM 12 O2' U B 559 -77.833 -0.161 29.980 1.00102.62 O
ATOM 13 C1' U B 559 -78.361 0.826 32.095 1.00101.15 C
ATOM 14 N1 U B 559 -77.765 1.176 33.420 1.00 99.67 N
ATOM 15 C2 U B 559 -76.976 2.313 33.493 1.00 98.70 C
ATOM 16 O2 U B 559 -76.728 3.001 32.522 1.00 98.99 O
ATOM 17 N3 U B 559 -76.485 2.623 34.736 1.00 97.41 N
ATOM 18 C4 U B 559 -76.701 1.916 35.905 1.00 97.00 C
ATOM 19 O4 U B 559 -76.194 2.309 36.965 1.00 95.83 O
ATOM 20 C5 U B 559 -77.531 0.755 35.754 1.00 98.07 C
ATOM 21 C6 U B 559 -78.026 0.439 34.558 1.00 99.32 C
ATOM 22 P G B 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 23 OP1 G B 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 24 OP2 G B 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 25 O5' G B 560 -75.544 -2.788 31.211 1.00 89.42 O
TER
ATOM 2 P G A 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 3 OP1 G A 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 4 OP2 G A 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 5 O5' G A 560 -75.544 -2.788 31.211 1.00 89.42 O
ATOM 6 C5' G A 560 -75.077 -2.774 29.863 1.00 90.07 C
ATOM 7 C4' G A 560 -74.105 -1.635 29.577 1.00 89.20 C
ATOM 8 O4' G A 560 -74.626 -0.373 30.072 1.00 88.75 O
ATOM 9 C3' G A 560 -72.722 -1.710 30.214 1.00 87.83 C
ATOM 10 O3' G A 560 -71.854 -2.636 29.584 1.00 88.05 O
ATOM 11 C2' G A 560 -72.263 -0.271 30.083 1.00 87.12 C
ATOM 12 O2' G A 560 -71.965 0.032 28.730 1.00 87.81 O
ATOM 13 C1' G A 560 -73.544 0.460 30.464 1.00 87.45 C
ATOM 14 N9 G A 560 -73.615 0.674 31.919 1.00 86.39 N
ATOM 15 C8 G A 560 -74.494 0.117 32.830 1.00 86.53 C
ATOM 16 N7 G A 560 -74.273 0.500 34.071 1.00 85.40 N
ATOM 17 C5 G A 560 -73.150 1.350 33.976 1.00 84.43 C
ATOM 18 C6 G A 560 -72.415 2.074 34.964 1.00 83.05 C
ATOM 19 O6 G A 560 -72.603 2.114 36.173 1.00 82.37 O
ATOM 20 N1 G A 560 -71.362 2.801 34.425 1.00 82.50 N
ATOM 21 C2 G A 560 -71.029 2.842 33.095 1.00 83.17 C
ATOM 22 N2 G A 560 -69.984 3.591 32.727 1.00 82.53 N
ATOM 23 N3 G A 560 -71.692 2.184 32.168 1.00 84.45 N
ATOM 24 C4 G A 560 -72.736 1.460 32.655 1.00 85.03 C
ATOM 25 P G A 561 -70.941 -3.631 30.470 1.00 88.80 P
ATOM 26 OP1 G A 561 -70.470 -4.704 29.556 1.00 89.58 O
ATOM 27 OP2 G A 561 -71.740 -4.018 31.659 1.00 88.62 O
ATOM 28 O5' G A 561 -69.706 -2.697 30.926 1.00 87.34 O
TER
ATOM 1 O3' C B 558 -81.942 -1.409 35.402 1.00145.99 O
ATOM 2 P U B 559 -80.764 -2.503 35.402 1.00101.80 P
ATOM 3 OP1 U B 559 -81.383 -3.828 35.185 1.00102.91 O
ATOM 4 OP2 U B 559 -79.966 -2.286 36.632 1.00100.32 O
ATOM 5 O5' U B 559 -79.922 -2.088 34.120 1.00101.89 O
ATOM 6 C5' U B 559 -80.590 -1.807 32.908 1.00103.13 C
ATOM 7 C4' U B 559 -79.713 -1.068 31.952 1.00102.89 C
ATOM 8 O4' U B 559 -79.664 0.326 32.316 1.00102.12 O
ATOM 9 C3' U B 559 -78.265 -1.488 31.942 1.00101.97 C
ATOM 10 O3' U B 559 -78.039 -2.643 31.197 1.00102.75 O
ATOM 11 C2' U B 559 -77.582 -0.267 31.379 1.00101.45 C
ATOM 12 O2' U B 559 -77.833 -0.161 29.980 1.00102.62 O
ATOM 13 C1' U B 559 -78.361 0.826 32.095 1.00101.15 C
ATOM 14 N1 U B 559 -77.765 1.176 33.420 1.00 99.67 N
ATOM 15 C2 U B 559 -76.976 2.313 33.493 1.00 98.70 C
ATOM 16 O2 U B 559 -76.728 3.001 32.522 1.00 98.99 O
ATOM 17 N3 U B 559 -76.485 2.623 34.736 1.00 97.41 N
ATOM 18 C4 U B 559 -76.701 1.916 35.905 1.00 97.00 C
ATOM 19 O4 U B 559 -76.194 2.309 36.965 1.00 95.83 O
ATOM 20 C5 U B 559 -77.531 0.755 35.754 1.00 98.07 C
ATOM 21 C6 U B 559 -78.026 0.439 34.558 1.00 99.32 C
ATOM 22 P G B 560 -76.860 -3.618 31.623 1.00 90.36 P
ATOM 23 OP1 G B 560 -76.999 -4.837 30.779 1.00 91.53 O
ATOM 24 OP2 G B 560 -76.927 -3.758 33.098 1.00 89.43 O
ATOM 25 O5' G B 560 -75.544 -2.788 31.211 1.00 89.42 O
TER
Atoms:
OP1: (-76.999,-4.837,30.779)
OP2: (-76.927,-3.758,33.098)
C3': (-72.722,-1.710,30.214)
C1': (-73.544,0.460,30.464)
C5': (-75.077,-2.774,29.863)
O6: (-72.603,2.114,36.173)
O4': (-74.626,-0.373,30.072)
C8: (-74.494,0.117,32.830)
C2: (-71.029,2.842,33.095)
C6: (-72.415,2.074,34.964)
C5: (-73.150,1.350,33.976)
C4: (-72.736,1.460,32.655)
P: (-76.860,-3.618,31.623)
C4': (-74.105,-1.635,29.577)
C2': (-72.263,-0.271,30.083)
O2': (-71.965,0.032,28.730)
N1: (-71.362,2.801,34.425)
N2: (-69.984,3.591,32.727)
N3: (-71.692,2.184,32.168)
N7: (-74.273,0.500,34.071)
N9: (-73.615,0.674,31.919)
O5': (-75.544,-2.788,31.211)
O3': (-71.854,-2.636,29.584)
OP2: (-76.927,-3.758,33.098)
C3': (-72.722,-1.710,30.214)
C1': (-73.544,0.460,30.464)
C5': (-75.077,-2.774,29.863)
O6: (-72.603,2.114,36.173)
O4': (-74.626,-0.373,30.072)
C8: (-74.494,0.117,32.830)
C2: (-71.029,2.842,33.095)
C6: (-72.415,2.074,34.964)
C5: (-73.150,1.350,33.976)
C4: (-72.736,1.460,32.655)
P: (-76.860,-3.618,31.623)
C4': (-74.105,-1.635,29.577)
C2': (-72.263,-0.271,30.083)
O2': (-71.965,0.032,28.730)
N1: (-71.362,2.801,34.425)
N2: (-69.984,3.591,32.727)
N3: (-71.692,2.184,32.168)
N7: (-74.273,0.500,34.071)
N9: (-73.615,0.674,31.919)
O5': (-75.544,-2.788,31.211)
O3': (-71.854,-2.636,29.584)
C4: (-76.701,1.916,35.905)
N3: (-76.485,2.623,34.736)
OP1: (-81.383,-3.828,35.185)
OP2: (-79.966,-2.286,36.632)
C2: (-76.976,2.313,33.493)
C1': (-78.361,0.826,32.095)
C3': (-78.265,-1.488,31.942)
O5': (-79.922,-2.088,34.120)
O4': (-79.664,0.326,32.316)
C5': (-80.590,-1.807,32.908)
P: (-80.764,-2.503,35.402)
C4': (-79.713,-1.068,31.952)
C2': (-77.582,-0.267,31.379)
O2': (-77.833,-0.161,29.980)
N1: (-77.765,1.176,33.420)
O4: (-76.194,2.309,36.965)
O2: (-76.728,3.001,32.522)
C6: (-78.026,0.439,34.558)
C5: (-77.531,0.755,35.754)
O3': (-78.039,-2.643,31.197)
N3: (-76.485,2.623,34.736)
OP1: (-81.383,-3.828,35.185)
OP2: (-79.966,-2.286,36.632)
C2: (-76.976,2.313,33.493)
C1': (-78.361,0.826,32.095)
C3': (-78.265,-1.488,31.942)
O5': (-79.922,-2.088,34.120)
O4': (-79.664,0.326,32.316)
C5': (-80.590,-1.807,32.908)
P: (-80.764,-2.503,35.402)
C4': (-79.713,-1.068,31.952)
C2': (-77.582,-0.267,31.379)
O2': (-77.833,-0.161,29.980)
N1: (-77.765,1.176,33.420)
O4: (-76.194,2.309,36.965)
O2: (-76.728,3.001,32.522)
C6: (-78.026,0.439,34.558)
C5: (-77.531,0.755,35.754)
O3': (-78.039,-2.643,31.197)
Image (generated by PyMOL):