Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0556:0555
Extra
PDB:
ATOM 1 O3' U A 555 4.116 92.621 107.638 1.00 38.56 O
ATOM 2 P G A 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 3 OP1 G A 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 4 OP2 G A 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 5 O5' G A 556 2.235 92.838 109.275 1.00 37.41 O
ATOM 6 C5' G A 556 2.291 94.177 109.793 1.00 38.20 C
ATOM 7 C4' G A 556 0.894 94.700 110.037 1.00 40.44 C
ATOM 8 O4' G A 556 0.200 94.857 108.767 1.00 40.03 O
ATOM 9 C3' G A 556 -0.032 93.794 110.838 1.00 41.74 C
ATOM 10 O3' G A 556 0.214 93.845 112.239 1.00 43.79 O
ATOM 11 C2' G A 556 -1.400 94.327 110.431 1.00 40.88 C
ATOM 12 O2' G A 556 -1.700 95.573 111.036 1.00 39.76 O
ATOM 13 C1' G A 556 -1.180 94.550 108.935 1.00 39.40 C
ATOM 14 N9 G A 556 -1.475 93.357 108.144 1.00 39.23 N
ATOM 15 C8 G A 556 -0.594 92.358 107.798 1.00 38.70 C
ATOM 16 N7 G A 556 -1.137 91.426 107.064 1.00 39.06 N
ATOM 17 C5 G A 556 -2.459 91.826 106.920 1.00 38.97 C
ATOM 18 C6 G A 556 -3.531 91.214 106.220 1.00 39.69 C
ATOM 19 O6 G A 556 -3.522 90.166 105.559 1.00 41.30 O
ATOM 20 N1 G A 556 -4.706 91.951 106.338 1.00 38.74 N
ATOM 21 C2 G A 556 -4.831 93.126 107.033 1.00 39.71 C
ATOM 22 N2 G A 556 -6.042 93.691 107.023 1.00 41.74 N
ATOM 23 N3 G A 556 -3.840 93.709 107.686 1.00 40.37 N
ATOM 24 C4 G A 556 -2.689 93.010 107.587 1.00 39.55 C
ATOM 25 P A A 557 -0.238 92.616 113.176 1.00 45.81 P
ATOM 26 OP1 A A 557 0.413 92.839 114.489 1.00 46.30 O
ATOM 27 OP2 A A 557 -0.052 91.317 112.488 1.00 42.47 O
ATOM 28 O5' A A 557 -1.802 92.860 113.336 1.00 46.79 O
TER
ATOM 1 O3' A B 554 3.567 89.971 102.034 1.00 38.01 O
ATOM 2 P U B 555 2.970 89.422 103.420 1.00 37.12 P
ATOM 3 OP1 U B 555 3.876 88.363 103.901 1.00 34.90 O
ATOM 4 OP2 U B 555 1.536 89.114 103.199 1.00 37.99 O
ATOM 5 O5' U B 555 3.049 90.673 104.404 1.00 35.45 O
ATOM 6 C5' U B 555 4.287 91.361 104.648 1.00 35.08 C
ATOM 7 C4' U B 555 4.010 92.731 105.217 1.00 35.51 C
ATOM 8 O4' U B 555 3.157 93.440 104.291 1.00 37.36 O
ATOM 9 C3' U B 555 3.239 92.741 106.522 1.00 36.48 C
ATOM 10 O3' U B 555 4.116 92.621 107.638 1.00 38.56 O
ATOM 11 C2' U B 555 2.535 94.089 106.492 1.00 36.36 C
ATOM 12 O2' U B 555 3.352 95.163 106.902 1.00 34.41 O
ATOM 13 C1' U B 555 2.222 94.228 105.004 1.00 38.41 C
ATOM 14 N1 U B 555 0.866 93.807 104.616 1.00 40.74 N
ATOM 15 C2 U B 555 -0.161 94.735 104.752 1.00 42.31 C
ATOM 16 O2 U B 555 0.009 95.858 105.220 1.00 41.87 O
ATOM 17 N3 U B 555 -1.393 94.299 104.326 1.00 41.97 N
ATOM 18 C4 U B 555 -1.700 93.059 103.803 1.00 43.87 C
ATOM 19 O4 U B 555 -2.850 92.831 103.424 1.00 46.19 O
ATOM 20 C5 U B 555 -0.593 92.151 103.720 1.00 42.94 C
ATOM 21 C6 U B 555 0.619 92.545 104.118 1.00 40.58 C
ATOM 22 P G B 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 23 OP1 G B 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 24 OP2 G B 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 25 O5' G B 556 2.235 92.838 109.275 1.00 37.41 O
TER
ATOM 2 P G A 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 3 OP1 G A 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 4 OP2 G A 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 5 O5' G A 556 2.235 92.838 109.275 1.00 37.41 O
ATOM 6 C5' G A 556 2.291 94.177 109.793 1.00 38.20 C
ATOM 7 C4' G A 556 0.894 94.700 110.037 1.00 40.44 C
ATOM 8 O4' G A 556 0.200 94.857 108.767 1.00 40.03 O
ATOM 9 C3' G A 556 -0.032 93.794 110.838 1.00 41.74 C
ATOM 10 O3' G A 556 0.214 93.845 112.239 1.00 43.79 O
ATOM 11 C2' G A 556 -1.400 94.327 110.431 1.00 40.88 C
ATOM 12 O2' G A 556 -1.700 95.573 111.036 1.00 39.76 O
ATOM 13 C1' G A 556 -1.180 94.550 108.935 1.00 39.40 C
ATOM 14 N9 G A 556 -1.475 93.357 108.144 1.00 39.23 N
ATOM 15 C8 G A 556 -0.594 92.358 107.798 1.00 38.70 C
ATOM 16 N7 G A 556 -1.137 91.426 107.064 1.00 39.06 N
ATOM 17 C5 G A 556 -2.459 91.826 106.920 1.00 38.97 C
ATOM 18 C6 G A 556 -3.531 91.214 106.220 1.00 39.69 C
ATOM 19 O6 G A 556 -3.522 90.166 105.559 1.00 41.30 O
ATOM 20 N1 G A 556 -4.706 91.951 106.338 1.00 38.74 N
ATOM 21 C2 G A 556 -4.831 93.126 107.033 1.00 39.71 C
ATOM 22 N2 G A 556 -6.042 93.691 107.023 1.00 41.74 N
ATOM 23 N3 G A 556 -3.840 93.709 107.686 1.00 40.37 N
ATOM 24 C4 G A 556 -2.689 93.010 107.587 1.00 39.55 C
ATOM 25 P A A 557 -0.238 92.616 113.176 1.00 45.81 P
ATOM 26 OP1 A A 557 0.413 92.839 114.489 1.00 46.30 O
ATOM 27 OP2 A A 557 -0.052 91.317 112.488 1.00 42.47 O
ATOM 28 O5' A A 557 -1.802 92.860 113.336 1.00 46.79 O
TER
ATOM 1 O3' A B 554 3.567 89.971 102.034 1.00 38.01 O
ATOM 2 P U B 555 2.970 89.422 103.420 1.00 37.12 P
ATOM 3 OP1 U B 555 3.876 88.363 103.901 1.00 34.90 O
ATOM 4 OP2 U B 555 1.536 89.114 103.199 1.00 37.99 O
ATOM 5 O5' U B 555 3.049 90.673 104.404 1.00 35.45 O
ATOM 6 C5' U B 555 4.287 91.361 104.648 1.00 35.08 C
ATOM 7 C4' U B 555 4.010 92.731 105.217 1.00 35.51 C
ATOM 8 O4' U B 555 3.157 93.440 104.291 1.00 37.36 O
ATOM 9 C3' U B 555 3.239 92.741 106.522 1.00 36.48 C
ATOM 10 O3' U B 555 4.116 92.621 107.638 1.00 38.56 O
ATOM 11 C2' U B 555 2.535 94.089 106.492 1.00 36.36 C
ATOM 12 O2' U B 555 3.352 95.163 106.902 1.00 34.41 O
ATOM 13 C1' U B 555 2.222 94.228 105.004 1.00 38.41 C
ATOM 14 N1 U B 555 0.866 93.807 104.616 1.00 40.74 N
ATOM 15 C2 U B 555 -0.161 94.735 104.752 1.00 42.31 C
ATOM 16 O2 U B 555 0.009 95.858 105.220 1.00 41.87 O
ATOM 17 N3 U B 555 -1.393 94.299 104.326 1.00 41.97 N
ATOM 18 C4 U B 555 -1.700 93.059 103.803 1.00 43.87 C
ATOM 19 O4 U B 555 -2.850 92.831 103.424 1.00 46.19 O
ATOM 20 C5 U B 555 -0.593 92.151 103.720 1.00 42.94 C
ATOM 21 C6 U B 555 0.619 92.545 104.118 1.00 40.58 C
ATOM 22 P G B 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 23 OP1 G B 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 24 OP2 G B 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 25 O5' G B 556 2.235 92.838 109.275 1.00 37.41 O
TER
Atoms:
OP1: (4.524,92.335,110.095)
OP2: (3.221,90.579,108.748)
C3': (-0.032,93.794,110.838)
C1': (-1.180,94.550,108.935)
C5': (2.291,94.177,109.793)
O6: (-3.522,90.166,105.559)
O4': (0.200,94.857,108.767)
C8: (-0.594,92.358,107.798)
C2: (-4.831,93.126,107.033)
C6: (-3.531,91.214,106.220)
C5: (-2.459,91.826,106.920)
C4: (-2.689,93.010,107.587)
P: (3.566,92.005,109.015)
C4': (0.894,94.700,110.037)
C2': (-1.400,94.327,110.431)
O2': (-1.700,95.573,111.036)
N1: (-4.706,91.951,106.338)
N2: (-6.042,93.691,107.023)
N3: (-3.840,93.709,107.686)
N7: (-1.137,91.426,107.064)
N9: (-1.475,93.357,108.144)
O5': (2.235,92.838,109.275)
O3': (0.214,93.845,112.239)
OP2: (3.221,90.579,108.748)
C3': (-0.032,93.794,110.838)
C1': (-1.180,94.550,108.935)
C5': (2.291,94.177,109.793)
O6: (-3.522,90.166,105.559)
O4': (0.200,94.857,108.767)
C8: (-0.594,92.358,107.798)
C2: (-4.831,93.126,107.033)
C6: (-3.531,91.214,106.220)
C5: (-2.459,91.826,106.920)
C4: (-2.689,93.010,107.587)
P: (3.566,92.005,109.015)
C4': (0.894,94.700,110.037)
C2': (-1.400,94.327,110.431)
O2': (-1.700,95.573,111.036)
N1: (-4.706,91.951,106.338)
N2: (-6.042,93.691,107.023)
N3: (-3.840,93.709,107.686)
N7: (-1.137,91.426,107.064)
N9: (-1.475,93.357,108.144)
O5': (2.235,92.838,109.275)
O3': (0.214,93.845,112.239)
C4: (-1.700,93.059,103.803)
N3: (-1.393,94.299,104.326)
OP1: (3.876,88.363,103.901)
OP2: (1.536,89.114,103.199)
C2: (-0.161,94.735,104.752)
C1': (2.222,94.228,105.004)
C3': (3.239,92.741,106.522)
O5': (3.049,90.673,104.404)
O4': (3.157,93.440,104.291)
C5': (4.287,91.361,104.648)
P: (2.970,89.422,103.420)
C4': (4.010,92.731,105.217)
C2': (2.535,94.089,106.492)
O2': (3.352,95.163,106.902)
N1: (0.866,93.807,104.616)
O4: (-2.850,92.831,103.424)
O2: (0.009,95.858,105.220)
C6: (0.619,92.545,104.118)
C5: (-0.593,92.151,103.720)
O3': (4.116,92.621,107.638)
N3: (-1.393,94.299,104.326)
OP1: (3.876,88.363,103.901)
OP2: (1.536,89.114,103.199)
C2: (-0.161,94.735,104.752)
C1': (2.222,94.228,105.004)
C3': (3.239,92.741,106.522)
O5': (3.049,90.673,104.404)
O4': (3.157,93.440,104.291)
C5': (4.287,91.361,104.648)
P: (2.970,89.422,103.420)
C4': (4.010,92.731,105.217)
C2': (2.535,94.089,106.492)
O2': (3.352,95.163,106.902)
N1: (0.866,93.807,104.616)
O4: (-2.850,92.831,103.424)
O2: (0.009,95.858,105.220)
C6: (0.619,92.545,104.118)
C5: (-0.593,92.151,103.720)
O3': (4.116,92.621,107.638)
Image (generated by PyMOL):