ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0509:013

Extra

PDB:
ATOM 1 O3' A A 508 28.197 134.739 79.152 1.00 36.23 O
ATOM 2 P A A 509 28.212 135.715 80.436 1.00 38.66 P
ATOM 3 OP1 A A 509 27.739 134.910 81.586 1.00 38.05 O
ATOM 4 OP2 A A 509 27.541 137.004 80.110 1.00 36.67 O
ATOM 5 O5' A A 509 29.752 136.022 80.686 1.00 38.53 O
ATOM 6 C5' A A 509 30.687 134.964 80.943 1.00 34.97 C
ATOM 7 C4' A A 509 32.101 135.489 80.857 1.00 34.27 C
ATOM 8 O4' A A 509 32.397 135.898 79.496 1.00 34.69 O
ATOM 9 C3' A A 509 32.414 136.738 81.667 1.00 32.11 C
ATOM 10 O3' A A 509 32.664 136.419 83.033 1.00 33.38 O
ATOM 11 C2' A A 509 33.692 137.216 80.994 1.00 32.75 C
ATOM 12 O2' A A 509 34.829 136.498 81.411 1.00 34.78 O
ATOM 13 C1' A A 509 33.420 136.875 79.526 1.00 32.83 C
ATOM 14 N9 A A 509 32.996 138.055 78.780 1.00 33.61 N
ATOM 15 C8 A A 509 31.808 138.742 78.856 1.00 34.47 C
ATOM 16 N7 A A 509 31.789 139.840 78.140 1.00 36.04 N
ATOM 17 C5 A A 509 33.036 139.859 77.526 1.00 36.64 C
ATOM 18 C6 A A 509 33.647 140.771 76.648 1.00 36.03 C
ATOM 19 N6 A A 509 33.067 141.899 76.227 1.00 37.38 N
ATOM 20 N1 A A 509 34.895 140.487 76.216 1.00 34.37 N
ATOM 21 C2 A A 509 35.482 139.368 76.645 1.00 33.75 C
ATOM 22 N3 A A 509 35.019 138.442 77.476 1.00 36.13 N
ATOM 23 C4 A A 509 33.776 138.750 77.888 1.00 35.60 C
ATOM 24 P U A 510 31.787 137.100 84.197 1.00 36.24 P
ATOM 25 OP1 U A 510 32.416 136.715 85.481 1.00 37.46 O
ATOM 26 OP2 U A 510 30.349 136.813 83.975 1.00 35.22 O
ATOM 27 O5' U A 510 32.030 138.657 84.001 1.00 35.50 O
TER

ATOM 1 O3' U B 12 34.311 148.324 73.877 1.00 39.61 O
ATOM 2 P G B 13 34.793 147.929 72.397 1.00 39.91 P
ATOM 3 OP1 G B 13 36.177 148.441 72.238 1.00 38.77 O
ATOM 4 OP2 G B 13 33.736 148.361 71.451 1.00 42.48 O
ATOM 5 O5' G B 13 34.833 146.336 72.389 1.00 39.77 O
ATOM 6 C5' G B 13 35.782 145.591 73.181 1.00 37.14 C
ATOM 7 C4' G B 13 35.461 144.117 73.105 1.00 38.30 C
ATOM 8 O4' G B 13 34.176 143.865 73.739 1.00 40.17 O
ATOM 9 C3' G B 13 35.307 143.586 71.688 1.00 37.36 C
ATOM 10 O3' G B 13 36.575 143.201 71.177 1.00 36.47 O
ATOM 11 C2' G B 13 34.362 142.409 71.871 1.00 37.48 C
ATOM 12 O2' G B 13 35.044 141.287 72.374 1.00 39.41 O
ATOM 13 C1' G B 13 33.432 142.931 72.970 1.00 38.89 C
ATOM 14 N9 G B 13 32.230 143.613 72.493 1.00 40.24 N
ATOM 15 C8 G B 13 32.151 144.899 72.018 1.00 38.16 C
ATOM 16 N7 G B 13 30.938 145.256 71.706 1.00 39.14 N
ATOM 17 C5 G B 13 30.167 144.135 71.978 1.00 39.23 C
ATOM 18 C6 G B 13 28.773 143.927 71.837 1.00 39.59 C
ATOM 19 O6 G B 13 27.916 144.720 71.441 1.00 41.54 O
ATOM 20 N1 G B 13 28.404 142.644 72.220 1.00 39.11 N
ATOM 21 C2 G B 13 29.261 141.687 72.688 1.00 39.99 C
ATOM 22 N2 G B 13 28.710 140.512 73.012 1.00 38.68 N
ATOM 23 N3 G B 13 30.567 141.868 72.829 1.00 41.98 N
ATOM 24 C4 G B 13 30.948 143.108 72.456 1.00 40.33 C
ATOM 25 P G B 14 36.910 143.410 69.621 1.00 35.97 P
ATOM 26 OP1 G B 14 38.370 143.260 69.424 1.00 36.65 O
ATOM 27 OP2 G B 14 36.243 144.665 69.200 1.00 37.21 O
ATOM 28 O5' G B 14 36.196 142.184 68.899 1.00 34.91 O
TER

Atoms:
OP1: (27.739,134.910,81.586)
OP2: (27.541,137.004,80.110)
C3': (32.414,136.738,81.667)
C1': (33.420,136.875,79.526)
C5': (30.687,134.964,80.943)
O4': (32.397,135.898,79.496)
C8: (31.808,138.742,78.856)
O2': (34.829,136.498,81.411)
C6: (33.647,140.771,76.648)
C5: (33.036,139.859,77.526)
C4: (33.776,138.750,77.888)
P: (28.212,135.715,80.436)
C4': (32.101,135.489,80.857)
C2': (33.692,137.216,80.994)
C2: (35.482,139.368,76.645)
N1: (34.895,140.487,76.216)
N3: (35.019,138.442,77.476)
N6: (33.067,141.899,76.227)
N7: (31.789,139.840,78.140)
N9: (32.996,138.055,78.780)
O5': (29.752,136.022,80.686)
O3': (32.664,136.419,83.033)
OP1: (36.177,148.441,72.238)
OP2: (33.736,148.361,71.451)
C3': (35.307,143.586,71.688)
C1': (33.432,142.931,72.970)
C5': (35.782,145.591,73.181)
O6: (27.916,144.720,71.441)
O4': (34.176,143.865,73.739)
C8: (32.151,144.899,72.018)
C2: (29.261,141.687,72.688)
C6: (28.773,143.927,71.837)
C5: (30.167,144.135,71.978)
C4: (30.948,143.108,72.456)
P: (34.793,147.929,72.397)
C4': (35.461,144.117,73.105)
C2': (34.362,142.409,71.871)
O2': (35.044,141.287,72.374)
N1: (28.404,142.644,72.220)
N2: (28.710,140.512,73.012)
N3: (30.567,141.868,72.829)
N7: (30.938,145.256,71.706)
N9: (32.230,143.613,72.493)
O5': (34.833,146.336,72.389)
O3': (36.575,143.201,71.177)
Image (generated by PyMOL):
PyMOL image
show in jmol