Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E43:E42
Extra
PDB:
ATOM 1 O3' U A 42 -14.116 26.955 -10.545 1.00 33.01 O
ATOM 2 P G A 43 -14.346 26.370 -9.069 1.00 29.77 P
ATOM 3 OP1 G A 43 -13.567 25.111 -8.940 1.00 31.11 O
ATOM 4 OP2 G A 43 -15.810 26.354 -8.819 1.00 27.76 O
ATOM 5 O5' G A 43 -13.695 27.472 -8.123 1.00 26.00 O
ATOM 6 C5' G A 43 -12.308 27.783 -8.213 1.00 22.01 C
ATOM 7 C4' G A 43 -12.045 29.140 -7.614 1.00 20.73 C
ATOM 8 O4' G A 43 -12.726 30.148 -8.406 1.00 19.94 O
ATOM 9 C3' G A 43 -12.583 29.332 -6.206 1.00 20.52 C
ATOM 10 O3' G A 43 -11.643 28.866 -5.245 1.00 21.47 O
ATOM 11 C2' G A 43 -12.765 30.842 -6.137 1.00 20.03 C
ATOM 12 O2' G A 43 -11.550 31.521 -5.885 1.00 15.51 O
ATOM 13 C1' G A 43 -13.251 31.152 -7.555 1.00 18.43 C
ATOM 14 N9 G A 43 -14.705 31.134 -7.688 1.00 17.98 N
ATOM 15 C8 G A 43 -15.521 30.029 -7.679 1.00 16.68 C
ATOM 16 N7 G A 43 -16.785 30.323 -7.819 1.00 15.70 N
ATOM 17 C5 G A 43 -16.806 31.707 -7.925 1.00 19.14 C
ATOM 18 C6 G A 43 -17.897 32.600 -8.092 1.00 20.87 C
ATOM 19 O6 G A 43 -19.102 32.337 -8.182 1.00 23.35 O
ATOM 20 N1 G A 43 -17.470 33.922 -8.153 1.00 19.88 N
ATOM 21 C2 G A 43 -16.164 34.336 -8.064 1.00 17.90 C
ATOM 22 N2 G A 43 -15.958 35.657 -8.145 1.00 20.06 N
ATOM 23 N3 G A 43 -15.139 33.516 -7.907 1.00 19.13 N
ATOM 24 C4 G A 43 -15.530 32.224 -7.847 1.00 19.37 C
ATOM 25 P G A 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 26 OP1 G A 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 27 OP2 G A 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 28 O5' G A 44 -12.165 29.498 -2.859 1.00 20.93 O
TER
ATOM 1 O3' C B 41 -20.283 26.403 -13.723 1.00 46.87 O
ATOM 2 P U B 42 -19.587 26.309 -12.279 1.00 47.86 P
ATOM 3 OP1 U B 42 -19.644 24.892 -11.835 1.00 48.37 O
ATOM 4 OP2 U B 42 -20.155 27.375 -11.414 1.00 43.14 O
ATOM 5 O5' U B 42 -18.066 26.669 -12.580 1.00 45.02 O
ATOM 6 C5' U B 42 -17.164 26.955 -11.524 1.00 41.88 C
ATOM 7 C4' U B 42 -15.876 27.516 -12.075 1.00 38.79 C
ATOM 8 O4' U B 42 -16.162 28.667 -12.911 1.00 37.77 O
ATOM 9 C3' U B 42 -14.924 28.028 -11.009 1.00 36.93 C
ATOM 10 O3' U B 42 -14.116 26.955 -10.545 1.00 33.01 O
ATOM 11 C2' U B 42 -14.119 29.077 -11.764 1.00 36.91 C
ATOM 12 O2' U B 42 -13.075 28.511 -12.531 1.00 39.12 O
ATOM 13 C1' U B 42 -15.181 29.666 -12.697 1.00 35.64 C
ATOM 14 N1 U B 42 -15.863 30.862 -12.180 1.00 32.46 N
ATOM 15 C2 U B 42 -15.111 32.001 -11.972 1.00 31.72 C
ATOM 16 O2 U B 42 -13.910 32.047 -12.170 1.00 32.15 O
ATOM 17 N3 U B 42 -15.819 33.086 -11.520 1.00 31.58 N
ATOM 18 C4 U B 42 -17.173 33.143 -11.258 1.00 32.49 C
ATOM 19 O4 U B 42 -17.672 34.203 -10.878 1.00 35.37 O
ATOM 20 C5 U B 42 -17.875 31.920 -11.483 1.00 31.19 C
ATOM 21 C6 U B 42 -17.213 30.849 -11.925 1.00 31.93 C
ATOM 22 P G B 43 -14.346 26.370 -9.069 1.00 29.77 P
ATOM 23 OP1 G B 43 -13.567 25.111 -8.940 1.00 31.11 O
ATOM 24 OP2 G B 43 -15.810 26.354 -8.819 1.00 27.76 O
ATOM 25 O5' G B 43 -13.695 27.472 -8.123 1.00 26.00 O
TER
ATOM 2 P G A 43 -14.346 26.370 -9.069 1.00 29.77 P
ATOM 3 OP1 G A 43 -13.567 25.111 -8.940 1.00 31.11 O
ATOM 4 OP2 G A 43 -15.810 26.354 -8.819 1.00 27.76 O
ATOM 5 O5' G A 43 -13.695 27.472 -8.123 1.00 26.00 O
ATOM 6 C5' G A 43 -12.308 27.783 -8.213 1.00 22.01 C
ATOM 7 C4' G A 43 -12.045 29.140 -7.614 1.00 20.73 C
ATOM 8 O4' G A 43 -12.726 30.148 -8.406 1.00 19.94 O
ATOM 9 C3' G A 43 -12.583 29.332 -6.206 1.00 20.52 C
ATOM 10 O3' G A 43 -11.643 28.866 -5.245 1.00 21.47 O
ATOM 11 C2' G A 43 -12.765 30.842 -6.137 1.00 20.03 C
ATOM 12 O2' G A 43 -11.550 31.521 -5.885 1.00 15.51 O
ATOM 13 C1' G A 43 -13.251 31.152 -7.555 1.00 18.43 C
ATOM 14 N9 G A 43 -14.705 31.134 -7.688 1.00 17.98 N
ATOM 15 C8 G A 43 -15.521 30.029 -7.679 1.00 16.68 C
ATOM 16 N7 G A 43 -16.785 30.323 -7.819 1.00 15.70 N
ATOM 17 C5 G A 43 -16.806 31.707 -7.925 1.00 19.14 C
ATOM 18 C6 G A 43 -17.897 32.600 -8.092 1.00 20.87 C
ATOM 19 O6 G A 43 -19.102 32.337 -8.182 1.00 23.35 O
ATOM 20 N1 G A 43 -17.470 33.922 -8.153 1.00 19.88 N
ATOM 21 C2 G A 43 -16.164 34.336 -8.064 1.00 17.90 C
ATOM 22 N2 G A 43 -15.958 35.657 -8.145 1.00 20.06 N
ATOM 23 N3 G A 43 -15.139 33.516 -7.907 1.00 19.13 N
ATOM 24 C4 G A 43 -15.530 32.224 -7.847 1.00 19.37 C
ATOM 25 P G A 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 26 OP1 G A 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 27 OP2 G A 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 28 O5' G A 44 -12.165 29.498 -2.859 1.00 20.93 O
TER
ATOM 1 O3' C B 41 -20.283 26.403 -13.723 1.00 46.87 O
ATOM 2 P U B 42 -19.587 26.309 -12.279 1.00 47.86 P
ATOM 3 OP1 U B 42 -19.644 24.892 -11.835 1.00 48.37 O
ATOM 4 OP2 U B 42 -20.155 27.375 -11.414 1.00 43.14 O
ATOM 5 O5' U B 42 -18.066 26.669 -12.580 1.00 45.02 O
ATOM 6 C5' U B 42 -17.164 26.955 -11.524 1.00 41.88 C
ATOM 7 C4' U B 42 -15.876 27.516 -12.075 1.00 38.79 C
ATOM 8 O4' U B 42 -16.162 28.667 -12.911 1.00 37.77 O
ATOM 9 C3' U B 42 -14.924 28.028 -11.009 1.00 36.93 C
ATOM 10 O3' U B 42 -14.116 26.955 -10.545 1.00 33.01 O
ATOM 11 C2' U B 42 -14.119 29.077 -11.764 1.00 36.91 C
ATOM 12 O2' U B 42 -13.075 28.511 -12.531 1.00 39.12 O
ATOM 13 C1' U B 42 -15.181 29.666 -12.697 1.00 35.64 C
ATOM 14 N1 U B 42 -15.863 30.862 -12.180 1.00 32.46 N
ATOM 15 C2 U B 42 -15.111 32.001 -11.972 1.00 31.72 C
ATOM 16 O2 U B 42 -13.910 32.047 -12.170 1.00 32.15 O
ATOM 17 N3 U B 42 -15.819 33.086 -11.520 1.00 31.58 N
ATOM 18 C4 U B 42 -17.173 33.143 -11.258 1.00 32.49 C
ATOM 19 O4 U B 42 -17.672 34.203 -10.878 1.00 35.37 O
ATOM 20 C5 U B 42 -17.875 31.920 -11.483 1.00 31.19 C
ATOM 21 C6 U B 42 -17.213 30.849 -11.925 1.00 31.93 C
ATOM 22 P G B 43 -14.346 26.370 -9.069 1.00 29.77 P
ATOM 23 OP1 G B 43 -13.567 25.111 -8.940 1.00 31.11 O
ATOM 24 OP2 G B 43 -15.810 26.354 -8.819 1.00 27.76 O
ATOM 25 O5' G B 43 -13.695 27.472 -8.123 1.00 26.00 O
TER
Atoms:
OP1: (-13.567,25.111,-8.940)
OP2: (-15.810,26.354,-8.819)
C3': (-12.583,29.332,-6.206)
C1': (-13.251,31.152,-7.555)
C5': (-12.308,27.783,-8.213)
O6: (-19.102,32.337,-8.182)
O4': (-12.726,30.148,-8.406)
C8: (-15.521,30.029,-7.679)
C2: (-16.164,34.336,-8.064)
C6: (-17.897,32.600,-8.092)
C5: (-16.806,31.707,-7.925)
C4: (-15.530,32.224,-7.847)
P: (-14.346,26.370,-9.069)
C4': (-12.045,29.140,-7.614)
C2': (-12.765,30.842,-6.137)
O2': (-11.550,31.521,-5.885)
N1: (-17.470,33.922,-8.153)
N2: (-15.958,35.657,-8.145)
N3: (-15.139,33.516,-7.907)
N7: (-16.785,30.323,-7.819)
N9: (-14.705,31.134,-7.688)
O5': (-13.695,27.472,-8.123)
O3': (-11.643,28.866,-5.245)
OP2: (-15.810,26.354,-8.819)
C3': (-12.583,29.332,-6.206)
C1': (-13.251,31.152,-7.555)
C5': (-12.308,27.783,-8.213)
O6: (-19.102,32.337,-8.182)
O4': (-12.726,30.148,-8.406)
C8: (-15.521,30.029,-7.679)
C2: (-16.164,34.336,-8.064)
C6: (-17.897,32.600,-8.092)
C5: (-16.806,31.707,-7.925)
C4: (-15.530,32.224,-7.847)
P: (-14.346,26.370,-9.069)
C4': (-12.045,29.140,-7.614)
C2': (-12.765,30.842,-6.137)
O2': (-11.550,31.521,-5.885)
N1: (-17.470,33.922,-8.153)
N2: (-15.958,35.657,-8.145)
N3: (-15.139,33.516,-7.907)
N7: (-16.785,30.323,-7.819)
N9: (-14.705,31.134,-7.688)
O5': (-13.695,27.472,-8.123)
O3': (-11.643,28.866,-5.245)
C4: (-17.173,33.143,-11.258)
N3: (-15.819,33.086,-11.520)
OP1: (-19.644,24.892,-11.835)
OP2: (-20.155,27.375,-11.414)
C2: (-15.111,32.001,-11.972)
C1': (-15.181,29.666,-12.697)
C3': (-14.924,28.028,-11.009)
O5': (-18.066,26.669,-12.580)
O4': (-16.162,28.667,-12.911)
C5': (-17.164,26.955,-11.524)
P: (-19.587,26.309,-12.279)
C4': (-15.876,27.516,-12.075)
C2': (-14.119,29.077,-11.764)
O2': (-13.075,28.511,-12.531)
N1: (-15.863,30.862,-12.180)
O4: (-17.672,34.203,-10.878)
O2: (-13.910,32.047,-12.170)
C6: (-17.213,30.849,-11.925)
C5: (-17.875,31.920,-11.483)
O3': (-14.116,26.955,-10.545)
N3: (-15.819,33.086,-11.520)
OP1: (-19.644,24.892,-11.835)
OP2: (-20.155,27.375,-11.414)
C2: (-15.111,32.001,-11.972)
C1': (-15.181,29.666,-12.697)
C3': (-14.924,28.028,-11.009)
O5': (-18.066,26.669,-12.580)
O4': (-16.162,28.667,-12.911)
C5': (-17.164,26.955,-11.524)
P: (-19.587,26.309,-12.279)
C4': (-15.876,27.516,-12.075)
C2': (-14.119,29.077,-11.764)
O2': (-13.075,28.511,-12.531)
N1: (-15.863,30.862,-12.180)
O4: (-17.672,34.203,-10.878)
O2: (-13.910,32.047,-12.170)
C6: (-17.213,30.849,-11.925)
C5: (-17.875,31.920,-11.483)
O3': (-14.116,26.955,-10.545)
Image (generated by PyMOL):