ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A66:A24

Extra

PDB:
ATOM 1 O3' A A 65 5.831 43.040 31.950 1.00 33.13 O
ATOM 2 P A A 66 7.116 42.073 31.977 1.00 34.09 P
ATOM 3 OP1 A A 66 6.905 41.090 33.060 1.00 34.27 O
ATOM 4 OP2 A A 66 8.363 42.876 31.970 1.00 34.51 O
ATOM 5 O5' A A 66 7.039 41.336 30.560 1.00 33.63 O
ATOM 6 C5' A A 66 5.879 40.632 30.117 1.00 32.37 C
ATOM 7 C4' A A 66 6.063 40.287 28.653 1.00 31.75 C
ATOM 8 O4' A A 66 6.113 41.507 27.872 1.00 31.33 O
ATOM 9 C3' A A 66 7.396 39.625 28.333 1.00 31.37 C
ATOM 10 O3' A A 66 7.385 38.241 28.592 1.00 31.38 O
ATOM 11 C2' A A 66 7.561 39.936 26.854 1.00 31.06 C
ATOM 12 O2' A A 66 6.794 39.089 26.022 1.00 31.32 O
ATOM 13 C1' A A 66 7.039 41.365 26.803 1.00 30.73 C
ATOM 14 N9 A A 66 8.101 42.363 26.932 1.00 30.39 N
ATOM 15 C8 A A 66 8.515 42.970 28.084 1.00 30.22 C
ATOM 16 N7 A A 66 9.486 43.833 27.908 1.00 29.93 N
ATOM 17 C5 A A 66 9.731 43.791 26.554 1.00 29.53 C
ATOM 18 C6 A A 66 10.648 44.482 25.743 1.00 29.16 C
ATOM 19 N6 A A 66 11.508 45.369 26.236 1.00 29.30 N
ATOM 20 N1 A A 66 10.652 44.224 24.416 1.00 29.63 N
ATOM 21 C2 A A 66 9.777 43.324 23.939 1.00 30.15 C
ATOM 22 N3 A A 66 8.861 42.613 24.611 1.00 30.25 N
ATOM 23 C4 A A 66 8.889 42.890 25.929 1.00 30.08 C
ATOM 24 P G A 67 8.700 37.581 29.215 1.00 31.54 P
ATOM 25 OP1 G A 67 8.344 36.236 29.718 1.00 32.49 O
ATOM 26 OP2 G A 67 9.306 38.559 30.141 1.00 32.41 O
ATOM 27 O5' G A 67 9.665 37.417 27.956 1.00 30.18 O
TER

ATOM 1 O3' U B 23 18.908 50.338 28.432 1.00 20.82 O
ATOM 2 P G B 24 17.863 51.499 28.087 1.00 22.03 P
ATOM 3 OP1 G B 24 18.445 52.237 26.942 1.00 22.46 O
ATOM 4 OP2 G B 24 17.485 52.207 29.336 1.00 22.31 O
ATOM 5 O5' G B 24 16.557 50.740 27.580 1.00 22.10 O
ATOM 6 C5' G B 24 16.597 50.101 26.317 1.00 22.47 C
ATOM 7 C4' G B 24 15.531 49.035 26.226 1.00 22.60 C
ATOM 8 O4' G B 24 15.403 48.321 27.478 1.00 23.09 O
ATOM 9 C3' G B 24 14.144 49.578 25.968 1.00 22.55 C
ATOM 10 O3' G B 24 14.053 49.864 24.571 1.00 22.52 O
ATOM 11 C2' G B 24 13.296 48.389 26.420 1.00 22.71 C
ATOM 12 O2' G B 24 13.262 47.341 25.473 1.00 23.01 O
ATOM 13 C1' G B 24 14.063 47.886 27.633 1.00 22.69 C
ATOM 14 N9 G B 24 13.552 48.337 28.926 1.00 22.69 N
ATOM 15 C8 G B 24 13.996 49.408 29.668 1.00 22.96 C
ATOM 16 N7 G B 24 13.357 49.573 30.793 1.00 22.72 N
ATOM 17 C5 G B 24 12.433 48.539 30.801 1.00 22.51 C
ATOM 18 C6 G B 24 11.460 48.201 31.767 1.00 22.77 C
ATOM 19 O6 G B 24 11.214 48.768 32.834 1.00 23.75 O
ATOM 20 N1 G B 24 10.713 47.084 31.406 1.00 23.09 N
ATOM 21 C2 G B 24 10.890 46.376 30.243 1.00 22.53 C
ATOM 22 N2 G B 24 10.075 45.330 30.074 1.00 22.26 N
ATOM 23 N3 G B 24 11.801 46.680 29.322 1.00 22.55 N
ATOM 24 C4 G B 24 12.537 47.768 29.664 1.00 22.52 C
ATOM 25 P A B 25 13.722 51.332 24.024 1.00 21.93 P
ATOM 26 OP1 A B 25 12.279 51.508 24.283 1.00 22.24 O
ATOM 27 OP2 A B 25 14.272 51.475 22.655 1.00 21.70 O
ATOM 28 O5' A B 25 14.533 52.323 24.977 1.00 22.35 O
TER

Atoms:
OP1: (6.905,41.090,33.060)
OP2: (8.363,42.876,31.970)
C3': (7.396,39.625,28.333)
C1': (7.039,41.365,26.803)
C5': (5.879,40.632,30.117)
O4': (6.113,41.507,27.872)
C8: (8.515,42.970,28.084)
O2': (6.794,39.089,26.022)
C6: (10.648,44.482,25.743)
C5: (9.731,43.791,26.554)
C4: (8.889,42.890,25.929)
P: (7.116,42.073,31.977)
C4': (6.063,40.287,28.653)
C2': (7.561,39.936,26.854)
C2: (9.777,43.324,23.939)
N1: (10.652,44.224,24.416)
N3: (8.861,42.613,24.611)
N6: (11.508,45.369,26.236)
N7: (9.486,43.833,27.908)
N9: (8.101,42.363,26.932)
O5': (7.039,41.336,30.560)
O3': (7.385,38.241,28.592)
OP1: (18.445,52.237,26.942)
OP2: (17.485,52.207,29.336)
C3': (14.144,49.578,25.968)
C1': (14.063,47.886,27.633)
C5': (16.597,50.101,26.317)
O6: (11.214,48.768,32.834)
O4': (15.403,48.321,27.478)
C8: (13.996,49.408,29.668)
C2: (10.890,46.376,30.243)
C6: (11.460,48.201,31.767)
C5: (12.433,48.539,30.801)
C4: (12.537,47.768,29.664)
P: (17.863,51.499,28.087)
C4': (15.531,49.035,26.226)
C2': (13.296,48.389,26.420)
O2': (13.262,47.341,25.473)
N1: (10.713,47.084,31.406)
N2: (10.075,45.330,30.074)
N3: (11.801,46.680,29.322)
N7: (13.357,49.573,30.793)
N9: (13.552,48.337,28.926)
O5': (16.557,50.740,27.580)
O3': (14.053,49.864,24.571)
Image (generated by PyMOL):
PyMOL image
show in jmol