Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0556:0555
Extra
PDB:
ATOM 1 O3' U A 555 4.103 93.061 107.770 1.00 44.27 O
ATOM 2 P G A 556 3.526 92.458 109.149 1.00 43.26 P
ATOM 3 OP1 G A 556 4.489 92.825 110.214 1.00 42.53 O
ATOM 4 OP2 G A 556 3.176 91.028 108.950 1.00 42.67 O
ATOM 5 O5' G A 556 2.184 93.280 109.386 1.00 42.06 O
ATOM 6 C5' G A 556 2.227 94.641 109.834 1.00 43.60 C
ATOM 7 C4' G A 556 0.830 95.155 110.055 1.00 45.72 C
ATOM 8 O4' G A 556 0.147 95.260 108.783 1.00 46.36 O
ATOM 9 C3' G A 556 -0.071 94.245 110.871 1.00 46.83 C
ATOM 10 O3' G A 556 0.148 94.376 112.265 1.00 48.81 O
ATOM 11 C2' G A 556 -1.453 94.707 110.448 1.00 46.81 C
ATOM 12 O2' G A 556 -1.843 95.914 111.068 1.00 45.08 O
ATOM 13 C1' G A 556 -1.224 94.945 108.957 1.00 46.66 C
ATOM 14 N9 G A 556 -1.526 93.762 108.160 1.00 47.95 N
ATOM 15 C8 G A 556 -0.660 92.765 107.772 1.00 48.06 C
ATOM 16 N7 G A 556 -1.233 91.851 107.033 1.00 47.89 N
ATOM 17 C5 G A 556 -2.553 92.268 106.937 1.00 47.62 C
ATOM 18 C6 G A 556 -3.649 91.689 106.258 1.00 47.68 C
ATOM 19 O6 G A 556 -3.676 90.662 105.577 1.00 48.26 O
ATOM 20 N1 G A 556 -4.806 92.439 106.427 1.00 48.27 N
ATOM 21 C2 G A 556 -4.898 93.599 107.156 1.00 48.42 C
ATOM 22 N2 G A 556 -6.103 94.183 107.203 1.00 49.62 N
ATOM 23 N3 G A 556 -3.885 94.148 107.791 1.00 47.28 N
ATOM 24 C4 G A 556 -2.751 93.438 107.637 1.00 47.91 C
ATOM 25 P A A 557 -0.248 93.170 113.246 1.00 49.06 P
ATOM 26 OP1 A A 557 0.488 93.416 114.511 1.00 49.35 O
ATOM 27 OP2 A A 557 -0.101 91.858 112.553 1.00 47.31 O
ATOM 28 O5' A A 557 -1.797 93.421 113.495 1.00 49.72 O
TER
ATOM 1 O3' A B 554 3.479 90.422 102.111 1.00 40.75 O
ATOM 2 P U B 555 2.911 89.975 103.542 1.00 41.24 P
ATOM 3 OP1 U B 555 3.859 88.979 104.107 1.00 39.14 O
ATOM 4 OP2 U B 555 1.485 89.609 103.362 1.00 40.89 O
ATOM 5 O5' U B 555 2.985 91.306 104.417 1.00 39.02 O
ATOM 6 C5' U B 555 4.250 91.929 104.714 1.00 39.88 C
ATOM 7 C4' U B 555 4.024 93.274 105.345 1.00 41.10 C
ATOM 8 O4' U B 555 3.215 94.058 104.436 1.00 42.76 O
ATOM 9 C3' U B 555 3.235 93.249 106.645 1.00 43.18 C
ATOM 10 O3' U B 555 4.103 93.061 107.770 1.00 44.27 O
ATOM 11 C2' U B 555 2.569 94.618 106.656 1.00 43.59 C
ATOM 12 O2' U B 555 3.430 95.639 107.113 1.00 44.20 O
ATOM 13 C1' U B 555 2.277 94.825 105.169 1.00 44.61 C
ATOM 14 N1 U B 555 0.925 94.422 104.750 1.00 46.82 N
ATOM 15 C2 U B 555 -0.108 95.340 104.908 1.00 47.94 C
ATOM 16 O2 U B 555 0.051 96.449 105.407 1.00 47.93 O
ATOM 17 N3 U B 555 -1.335 94.909 104.466 1.00 47.77 N
ATOM 18 C4 U B 555 -1.636 93.683 103.910 1.00 47.92 C
ATOM 19 O4 U B 555 -2.792 93.445 103.560 1.00 48.54 O
ATOM 20 C5 U B 555 -0.525 92.787 103.797 1.00 47.62 C
ATOM 21 C6 U B 555 0.684 93.175 104.208 1.00 46.84 C
ATOM 22 P G B 556 3.526 92.458 109.149 1.00 43.26 P
ATOM 23 OP1 G B 556 4.489 92.825 110.214 1.00 42.53 O
ATOM 24 OP2 G B 556 3.176 91.028 108.950 1.00 42.67 O
ATOM 25 O5' G B 556 2.184 93.280 109.386 1.00 42.06 O
TER
ATOM 2 P G A 556 3.526 92.458 109.149 1.00 43.26 P
ATOM 3 OP1 G A 556 4.489 92.825 110.214 1.00 42.53 O
ATOM 4 OP2 G A 556 3.176 91.028 108.950 1.00 42.67 O
ATOM 5 O5' G A 556 2.184 93.280 109.386 1.00 42.06 O
ATOM 6 C5' G A 556 2.227 94.641 109.834 1.00 43.60 C
ATOM 7 C4' G A 556 0.830 95.155 110.055 1.00 45.72 C
ATOM 8 O4' G A 556 0.147 95.260 108.783 1.00 46.36 O
ATOM 9 C3' G A 556 -0.071 94.245 110.871 1.00 46.83 C
ATOM 10 O3' G A 556 0.148 94.376 112.265 1.00 48.81 O
ATOM 11 C2' G A 556 -1.453 94.707 110.448 1.00 46.81 C
ATOM 12 O2' G A 556 -1.843 95.914 111.068 1.00 45.08 O
ATOM 13 C1' G A 556 -1.224 94.945 108.957 1.00 46.66 C
ATOM 14 N9 G A 556 -1.526 93.762 108.160 1.00 47.95 N
ATOM 15 C8 G A 556 -0.660 92.765 107.772 1.00 48.06 C
ATOM 16 N7 G A 556 -1.233 91.851 107.033 1.00 47.89 N
ATOM 17 C5 G A 556 -2.553 92.268 106.937 1.00 47.62 C
ATOM 18 C6 G A 556 -3.649 91.689 106.258 1.00 47.68 C
ATOM 19 O6 G A 556 -3.676 90.662 105.577 1.00 48.26 O
ATOM 20 N1 G A 556 -4.806 92.439 106.427 1.00 48.27 N
ATOM 21 C2 G A 556 -4.898 93.599 107.156 1.00 48.42 C
ATOM 22 N2 G A 556 -6.103 94.183 107.203 1.00 49.62 N
ATOM 23 N3 G A 556 -3.885 94.148 107.791 1.00 47.28 N
ATOM 24 C4 G A 556 -2.751 93.438 107.637 1.00 47.91 C
ATOM 25 P A A 557 -0.248 93.170 113.246 1.00 49.06 P
ATOM 26 OP1 A A 557 0.488 93.416 114.511 1.00 49.35 O
ATOM 27 OP2 A A 557 -0.101 91.858 112.553 1.00 47.31 O
ATOM 28 O5' A A 557 -1.797 93.421 113.495 1.00 49.72 O
TER
ATOM 1 O3' A B 554 3.479 90.422 102.111 1.00 40.75 O
ATOM 2 P U B 555 2.911 89.975 103.542 1.00 41.24 P
ATOM 3 OP1 U B 555 3.859 88.979 104.107 1.00 39.14 O
ATOM 4 OP2 U B 555 1.485 89.609 103.362 1.00 40.89 O
ATOM 5 O5' U B 555 2.985 91.306 104.417 1.00 39.02 O
ATOM 6 C5' U B 555 4.250 91.929 104.714 1.00 39.88 C
ATOM 7 C4' U B 555 4.024 93.274 105.345 1.00 41.10 C
ATOM 8 O4' U B 555 3.215 94.058 104.436 1.00 42.76 O
ATOM 9 C3' U B 555 3.235 93.249 106.645 1.00 43.18 C
ATOM 10 O3' U B 555 4.103 93.061 107.770 1.00 44.27 O
ATOM 11 C2' U B 555 2.569 94.618 106.656 1.00 43.59 C
ATOM 12 O2' U B 555 3.430 95.639 107.113 1.00 44.20 O
ATOM 13 C1' U B 555 2.277 94.825 105.169 1.00 44.61 C
ATOM 14 N1 U B 555 0.925 94.422 104.750 1.00 46.82 N
ATOM 15 C2 U B 555 -0.108 95.340 104.908 1.00 47.94 C
ATOM 16 O2 U B 555 0.051 96.449 105.407 1.00 47.93 O
ATOM 17 N3 U B 555 -1.335 94.909 104.466 1.00 47.77 N
ATOM 18 C4 U B 555 -1.636 93.683 103.910 1.00 47.92 C
ATOM 19 O4 U B 555 -2.792 93.445 103.560 1.00 48.54 O
ATOM 20 C5 U B 555 -0.525 92.787 103.797 1.00 47.62 C
ATOM 21 C6 U B 555 0.684 93.175 104.208 1.00 46.84 C
ATOM 22 P G B 556 3.526 92.458 109.149 1.00 43.26 P
ATOM 23 OP1 G B 556 4.489 92.825 110.214 1.00 42.53 O
ATOM 24 OP2 G B 556 3.176 91.028 108.950 1.00 42.67 O
ATOM 25 O5' G B 556 2.184 93.280 109.386 1.00 42.06 O
TER
Atoms:
OP1: (4.489,92.825,110.214)
OP2: (3.176,91.028,108.950)
C3': (-0.071,94.245,110.871)
C1': (-1.224,94.945,108.957)
C5': (2.227,94.641,109.834)
O6: (-3.676,90.662,105.577)
O4': (0.147,95.260,108.783)
C8: (-0.660,92.765,107.772)
C2: (-4.898,93.599,107.156)
C6: (-3.649,91.689,106.258)
C5: (-2.553,92.268,106.937)
C4: (-2.751,93.438,107.637)
P: (3.526,92.458,109.149)
C4': (0.830,95.155,110.055)
C2': (-1.453,94.707,110.448)
O2': (-1.843,95.914,111.068)
N1: (-4.806,92.439,106.427)
N2: (-6.103,94.183,107.203)
N3: (-3.885,94.148,107.791)
N7: (-1.233,91.851,107.033)
N9: (-1.526,93.762,108.160)
O5': (2.184,93.280,109.386)
O3': (0.148,94.376,112.265)
OP2: (3.176,91.028,108.950)
C3': (-0.071,94.245,110.871)
C1': (-1.224,94.945,108.957)
C5': (2.227,94.641,109.834)
O6: (-3.676,90.662,105.577)
O4': (0.147,95.260,108.783)
C8: (-0.660,92.765,107.772)
C2: (-4.898,93.599,107.156)
C6: (-3.649,91.689,106.258)
C5: (-2.553,92.268,106.937)
C4: (-2.751,93.438,107.637)
P: (3.526,92.458,109.149)
C4': (0.830,95.155,110.055)
C2': (-1.453,94.707,110.448)
O2': (-1.843,95.914,111.068)
N1: (-4.806,92.439,106.427)
N2: (-6.103,94.183,107.203)
N3: (-3.885,94.148,107.791)
N7: (-1.233,91.851,107.033)
N9: (-1.526,93.762,108.160)
O5': (2.184,93.280,109.386)
O3': (0.148,94.376,112.265)
C4: (-1.636,93.683,103.910)
N3: (-1.335,94.909,104.466)
OP1: (3.859,88.979,104.107)
OP2: (1.485,89.609,103.362)
C2: (-0.108,95.340,104.908)
C1': (2.277,94.825,105.169)
C3': (3.235,93.249,106.645)
O5': (2.985,91.306,104.417)
O4': (3.215,94.058,104.436)
C5': (4.250,91.929,104.714)
P: (2.911,89.975,103.542)
C4': (4.024,93.274,105.345)
C2': (2.569,94.618,106.656)
O2': (3.430,95.639,107.113)
N1: (0.925,94.422,104.750)
O4: (-2.792,93.445,103.560)
O2: (0.051,96.449,105.407)
C6: (0.684,93.175,104.208)
C5: (-0.525,92.787,103.797)
O3': (4.103,93.061,107.770)
N3: (-1.335,94.909,104.466)
OP1: (3.859,88.979,104.107)
OP2: (1.485,89.609,103.362)
C2: (-0.108,95.340,104.908)
C1': (2.277,94.825,105.169)
C3': (3.235,93.249,106.645)
O5': (2.985,91.306,104.417)
O4': (3.215,94.058,104.436)
C5': (4.250,91.929,104.714)
P: (2.911,89.975,103.542)
C4': (4.024,93.274,105.345)
C2': (2.569,94.618,106.656)
O2': (3.430,95.639,107.113)
N1: (0.925,94.422,104.750)
O4: (-2.792,93.445,103.560)
O2: (0.051,96.449,105.407)
C6: (0.684,93.175,104.208)
C5: (-0.525,92.787,103.797)
O3': (4.103,93.061,107.770)
Image (generated by PyMOL):