Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01889:01866
Extra
PDB:
ATOM 1 O3' A A1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 2 P A A1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 3 OP1 A A1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 4 OP2 A A1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 5 O5' A A1889 115.223 100.742 58.638 1.00 68.28 O
ATOM 6 C5' A A1889 115.213 102.148 58.323 1.00 65.59 C
ATOM 7 C4' A A1889 113.836 102.727 58.551 1.00 63.66 C
ATOM 8 O4' A A1889 112.894 102.113 57.629 1.00 63.12 O
ATOM 9 C3' A A1889 113.227 102.464 59.918 1.00 62.06 C
ATOM 10 O3' A A1889 113.687 103.363 60.908 1.00 61.42 O
ATOM 11 C2' A A1889 111.746 102.622 59.631 1.00 62.11 C
ATOM 12 O2' A A1889 111.365 103.971 59.467 1.00 61.51 O
ATOM 13 C1' A A1889 111.647 101.916 58.283 1.00 62.61 C
ATOM 14 N9 A A1889 111.455 100.478 58.470 1.00 62.99 N
ATOM 15 C8 A A1889 112.418 99.504 58.564 1.00 62.89 C
ATOM 16 N7 A A1889 111.937 98.299 58.731 1.00 61.67 N
ATOM 17 C5 A A1889 110.566 98.490 58.751 1.00 61.48 C
ATOM 18 C6 A A1889 109.501 97.602 58.892 1.00 60.55 C
ATOM 19 N6 A A1889 109.652 96.289 59.038 1.00 60.87 N
ATOM 20 N1 A A1889 108.254 98.111 58.872 1.00 61.66 N
ATOM 21 C2 A A1889 108.102 99.430 58.716 1.00 61.94 C
ATOM 22 N3 A A1889 109.026 100.369 58.569 1.00 61.96 N
ATOM 23 C4 A A1889 110.254 99.827 58.595 1.00 62.65 C
ATOM 24 P G A1890 113.981 102.819 62.389 1.00 61.73 P
ATOM 25 OP1 G A1890 114.152 104.018 63.244 1.00 62.34 O
ATOM 26 OP2 G A1890 115.051 101.793 62.342 1.00 62.54 O
ATOM 27 O5' G A1890 112.638 102.072 62.805 1.00 63.56 O
TER
ATOM 1 O3' U B1865 108.813 87.532 61.439 1.00 75.67 O
ATOM 2 P G B1866 108.396 87.728 59.904 1.00 76.77 P
ATOM 3 OP1 G B1866 107.011 87.206 59.774 1.00 76.62 O
ATOM 4 OP2 G B1866 109.466 87.191 59.028 1.00 77.61 O
ATOM 5 O5' G B1866 108.405 89.310 59.710 1.00 77.46 O
ATOM 6 C5' G B1866 107.332 90.145 60.204 1.00 76.42 C
ATOM 7 C4' G B1866 107.507 91.558 59.697 1.00 75.00 C
ATOM 8 O4' G B1866 108.721 92.116 60.269 1.00 75.97 O
ATOM 9 C3' G B1866 107.721 91.663 58.195 1.00 73.73 C
ATOM 10 O3' G B1866 106.505 91.654 57.462 1.00 72.48 O
ATOM 11 C2' G B1866 108.486 92.967 58.065 1.00 73.91 C
ATOM 12 O2' G B1866 107.643 94.095 58.158 1.00 72.08 O
ATOM 13 C1' G B1866 109.401 92.886 59.290 1.00 76.06 C
ATOM 14 N9 G B1866 110.664 92.215 58.991 1.00 78.73 N
ATOM 15 C8 G B1866 110.901 90.858 58.958 1.00 79.63 C
ATOM 16 N7 G B1866 112.129 90.560 58.631 1.00 79.87 N
ATOM 17 C5 G B1866 112.741 91.791 58.442 1.00 80.17 C
ATOM 18 C6 G B1866 114.071 92.107 58.075 1.00 80.84 C
ATOM 19 O6 G B1866 115.009 91.334 57.827 1.00 82.42 O
ATOM 20 N1 G B1866 114.267 93.482 58.005 1.00 80.69 N
ATOM 21 C2 G B1866 113.307 94.431 58.252 1.00 79.93 C
ATOM 22 N2 G B1866 113.691 95.707 58.136 1.00 80.54 N
ATOM 23 N3 G B1866 112.064 94.151 58.590 1.00 79.75 N
ATOM 24 C4 G B1866 111.852 92.822 58.667 1.00 79.52 C
ATOM 25 P A B1867 106.258 90.516 56.353 1.00 71.45 P
ATOM 26 OP1 A B1867 105.376 89.500 56.985 1.00 68.84 O
ATOM 27 OP2 A B1867 107.589 90.106 55.808 1.00 71.29 O
ATOM 28 O5' A B1867 105.442 91.254 55.196 1.00 69.83 O
TER
ATOM 2 P A A1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 3 OP1 A A1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 4 OP2 A A1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 5 O5' A A1889 115.223 100.742 58.638 1.00 68.28 O
ATOM 6 C5' A A1889 115.213 102.148 58.323 1.00 65.59 C
ATOM 7 C4' A A1889 113.836 102.727 58.551 1.00 63.66 C
ATOM 8 O4' A A1889 112.894 102.113 57.629 1.00 63.12 O
ATOM 9 C3' A A1889 113.227 102.464 59.918 1.00 62.06 C
ATOM 10 O3' A A1889 113.687 103.363 60.908 1.00 61.42 O
ATOM 11 C2' A A1889 111.746 102.622 59.631 1.00 62.11 C
ATOM 12 O2' A A1889 111.365 103.971 59.467 1.00 61.51 O
ATOM 13 C1' A A1889 111.647 101.916 58.283 1.00 62.61 C
ATOM 14 N9 A A1889 111.455 100.478 58.470 1.00 62.99 N
ATOM 15 C8 A A1889 112.418 99.504 58.564 1.00 62.89 C
ATOM 16 N7 A A1889 111.937 98.299 58.731 1.00 61.67 N
ATOM 17 C5 A A1889 110.566 98.490 58.751 1.00 61.48 C
ATOM 18 C6 A A1889 109.501 97.602 58.892 1.00 60.55 C
ATOM 19 N6 A A1889 109.652 96.289 59.038 1.00 60.87 N
ATOM 20 N1 A A1889 108.254 98.111 58.872 1.00 61.66 N
ATOM 21 C2 A A1889 108.102 99.430 58.716 1.00 61.94 C
ATOM 22 N3 A A1889 109.026 100.369 58.569 1.00 61.96 N
ATOM 23 C4 A A1889 110.254 99.827 58.595 1.00 62.65 C
ATOM 24 P G A1890 113.981 102.819 62.389 1.00 61.73 P
ATOM 25 OP1 G A1890 114.152 104.018 63.244 1.00 62.34 O
ATOM 26 OP2 G A1890 115.051 101.793 62.342 1.00 62.54 O
ATOM 27 O5' G A1890 112.638 102.072 62.805 1.00 63.56 O
TER
ATOM 1 O3' U B1865 108.813 87.532 61.439 1.00 75.67 O
ATOM 2 P G B1866 108.396 87.728 59.904 1.00 76.77 P
ATOM 3 OP1 G B1866 107.011 87.206 59.774 1.00 76.62 O
ATOM 4 OP2 G B1866 109.466 87.191 59.028 1.00 77.61 O
ATOM 5 O5' G B1866 108.405 89.310 59.710 1.00 77.46 O
ATOM 6 C5' G B1866 107.332 90.145 60.204 1.00 76.42 C
ATOM 7 C4' G B1866 107.507 91.558 59.697 1.00 75.00 C
ATOM 8 O4' G B1866 108.721 92.116 60.269 1.00 75.97 O
ATOM 9 C3' G B1866 107.721 91.663 58.195 1.00 73.73 C
ATOM 10 O3' G B1866 106.505 91.654 57.462 1.00 72.48 O
ATOM 11 C2' G B1866 108.486 92.967 58.065 1.00 73.91 C
ATOM 12 O2' G B1866 107.643 94.095 58.158 1.00 72.08 O
ATOM 13 C1' G B1866 109.401 92.886 59.290 1.00 76.06 C
ATOM 14 N9 G B1866 110.664 92.215 58.991 1.00 78.73 N
ATOM 15 C8 G B1866 110.901 90.858 58.958 1.00 79.63 C
ATOM 16 N7 G B1866 112.129 90.560 58.631 1.00 79.87 N
ATOM 17 C5 G B1866 112.741 91.791 58.442 1.00 80.17 C
ATOM 18 C6 G B1866 114.071 92.107 58.075 1.00 80.84 C
ATOM 19 O6 G B1866 115.009 91.334 57.827 1.00 82.42 O
ATOM 20 N1 G B1866 114.267 93.482 58.005 1.00 80.69 N
ATOM 21 C2 G B1866 113.307 94.431 58.252 1.00 79.93 C
ATOM 22 N2 G B1866 113.691 95.707 58.136 1.00 80.54 N
ATOM 23 N3 G B1866 112.064 94.151 58.590 1.00 79.75 N
ATOM 24 C4 G B1866 111.852 92.822 58.667 1.00 79.52 C
ATOM 25 P A B1867 106.258 90.516 56.353 1.00 71.45 P
ATOM 26 OP1 A B1867 105.376 89.500 56.985 1.00 68.84 O
ATOM 27 OP2 A B1867 107.589 90.106 55.808 1.00 71.29 O
ATOM 28 O5' A B1867 105.442 91.254 55.196 1.00 69.83 O
TER
Atoms:
OP1: (117.679,100.364,58.336)
OP2: (116.036,98.399,58.525)
C3': (113.227,102.464,59.918)
C1': (111.647,101.916,58.283)
C5': (115.213,102.148,58.323)
O4': (112.894,102.113,57.629)
C8: (112.418,99.504,58.564)
O2': (111.365,103.971,59.467)
C6: (109.501,97.602,58.892)
C5: (110.566,98.490,58.751)
C4: (110.254,99.827,58.595)
P: (116.342,99.773,58.051)
C4': (113.836,102.727,58.551)
C2': (111.746,102.622,59.631)
C2: (108.102,99.430,58.716)
N1: (108.254,98.111,58.872)
N3: (109.026,100.369,58.569)
N6: (109.652,96.289,59.038)
N7: (111.937,98.299,58.731)
N9: (111.455,100.478,58.470)
O5': (115.223,100.742,58.638)
O3': (113.687,103.363,60.908)
OP2: (116.036,98.399,58.525)
C3': (113.227,102.464,59.918)
C1': (111.647,101.916,58.283)
C5': (115.213,102.148,58.323)
O4': (112.894,102.113,57.629)
C8: (112.418,99.504,58.564)
O2': (111.365,103.971,59.467)
C6: (109.501,97.602,58.892)
C5: (110.566,98.490,58.751)
C4: (110.254,99.827,58.595)
P: (116.342,99.773,58.051)
C4': (113.836,102.727,58.551)
C2': (111.746,102.622,59.631)
C2: (108.102,99.430,58.716)
N1: (108.254,98.111,58.872)
N3: (109.026,100.369,58.569)
N6: (109.652,96.289,59.038)
N7: (111.937,98.299,58.731)
N9: (111.455,100.478,58.470)
O5': (115.223,100.742,58.638)
O3': (113.687,103.363,60.908)
OP1: (107.011,87.206,59.774)
OP2: (109.466,87.191,59.028)
C3': (107.721,91.663,58.195)
C1': (109.401,92.886,59.290)
C5': (107.332,90.145,60.204)
O6: (115.009,91.334,57.827)
O4': (108.721,92.116,60.269)
C8: (110.901,90.858,58.958)
C2: (113.307,94.431,58.252)
C6: (114.071,92.107,58.075)
C5: (112.741,91.791,58.442)
C4: (111.852,92.822,58.667)
P: (108.396,87.728,59.904)
C4': (107.507,91.558,59.697)
C2': (108.486,92.967,58.065)
O2': (107.643,94.095,58.158)
N1: (114.267,93.482,58.005)
N2: (113.691,95.707,58.136)
N3: (112.064,94.151,58.590)
N7: (112.129,90.560,58.631)
N9: (110.664,92.215,58.991)
O5': (108.405,89.310,59.710)
O3': (106.505,91.654,57.462)
OP2: (109.466,87.191,59.028)
C3': (107.721,91.663,58.195)
C1': (109.401,92.886,59.290)
C5': (107.332,90.145,60.204)
O6: (115.009,91.334,57.827)
O4': (108.721,92.116,60.269)
C8: (110.901,90.858,58.958)
C2: (113.307,94.431,58.252)
C6: (114.071,92.107,58.075)
C5: (112.741,91.791,58.442)
C4: (111.852,92.822,58.667)
P: (108.396,87.728,59.904)
C4': (107.507,91.558,59.697)
C2': (108.486,92.967,58.065)
O2': (107.643,94.095,58.158)
N1: (114.267,93.482,58.005)
N2: (113.691,95.707,58.136)
N3: (112.064,94.151,58.590)
N7: (112.129,90.560,58.631)
N9: (110.664,92.215,58.991)
O5': (108.405,89.310,59.710)
O3': (106.505,91.654,57.462)
Image (generated by PyMOL):