Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M102:M70
Extra
PDB:
ATOM 1 O3' U A 101 -39.597 27.143 -61.831 1.00 77.16 O
ATOM 2 P A A 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 3 OP1 A A 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 4 OP2 A A 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 5 O5' A A 102 -37.894 28.676 -62.501 1.00 75.80 O
ATOM 6 C5' A A 102 -38.691 29.819 -62.142 1.00 79.65 C
ATOM 7 C4' A A 102 -37.798 30.858 -61.524 1.00 80.50 C
ATOM 8 O4' A A 102 -37.077 30.187 -60.476 1.00 77.97 O
ATOM 9 C3' A A 102 -36.653 31.264 -62.432 1.00 81.54 C
ATOM 10 O3' A A 102 -37.055 32.219 -63.389 1.00 85.60 O
ATOM 11 C2' A A 102 -35.594 31.772 -61.468 1.00 79.20 C
ATOM 12 O2' A A 102 -35.809 33.101 -61.071 1.00 83.03 O
ATOM 13 C1' A A 102 -35.821 30.832 -60.294 1.00 75.27 C
ATOM 14 N9 A A 102 -34.778 29.823 -60.213 1.00 71.77 N
ATOM 15 C8 A A 102 -34.780 28.591 -60.792 1.00 70.49 C
ATOM 16 N7 A A 102 -33.703 27.880 -60.547 1.00 69.13 N
ATOM 17 C5 A A 102 -32.955 28.714 -59.756 1.00 68.87 C
ATOM 18 C6 A A 102 -31.701 28.537 -59.180 1.00 68.30 C
ATOM 19 N6 A A 102 -31.018 27.416 -59.340 1.00 67.89 N
ATOM 20 N1 A A 102 -31.203 29.548 -58.444 1.00 69.71 N
ATOM 21 C2 A A 102 -31.938 30.672 -58.296 1.00 71.27 C
ATOM 22 N3 A A 102 -33.145 30.967 -58.792 1.00 71.62 N
ATOM 23 C4 A A 102 -33.594 29.923 -59.527 1.00 70.99 C
ATOM 24 P G A 103 -36.294 32.128 -64.785 1.00 88.35 P
ATOM 25 OP1 G A 103 -36.913 33.159 -65.666 1.00 91.64 O
ATOM 26 OP2 G A 103 -36.136 30.717 -65.270 1.00 84.96 O
ATOM 27 O5' G A 103 -34.857 32.594 -64.302 1.00 84.85 O
TER
ATOM 1 O3' C B 69 -23.898 21.193 -59.913 1.00 87.23 O
ATOM 2 P G B 70 -24.366 22.097 -58.678 1.00 84.16 P
ATOM 3 OP1 G B 70 -23.561 21.728 -57.474 1.00 84.99 O
ATOM 4 OP2 G B 70 -25.845 22.011 -58.629 1.00 79.24 O
ATOM 5 O5' G B 70 -23.880 23.511 -59.283 1.00 82.40 O
ATOM 6 C5' G B 70 -24.212 24.764 -58.731 1.00 79.43 C
ATOM 7 C4' G B 70 -25.537 25.310 -59.223 1.00 76.16 C
ATOM 8 O4' G B 70 -26.403 24.309 -59.789 1.00 74.01 O
ATOM 9 C3' G B 70 -26.324 25.820 -58.047 1.00 75.22 C
ATOM 10 O3' G B 70 -25.851 27.182 -57.742 1.00 79.01 O
ATOM 11 C2' G B 70 -27.805 25.499 -58.336 1.00 72.43 C
ATOM 12 O2' G B 70 -28.612 26.615 -58.593 1.00 73.50 O
ATOM 13 C1' G B 70 -27.739 24.723 -59.629 1.00 71.82 C
ATOM 14 N9 G B 70 -28.631 23.563 -59.718 1.00 71.99 N
ATOM 15 C8 G B 70 -28.305 22.218 -59.584 1.00 73.07 C
ATOM 16 N7 G B 70 -29.309 21.387 -59.744 1.00 71.87 N
ATOM 17 C5 G B 70 -30.369 22.234 -60.010 1.00 70.27 C
ATOM 18 C6 G B 70 -31.706 21.910 -60.276 1.00 69.67 C
ATOM 19 O6 G B 70 -32.175 20.774 -60.303 1.00 71.89 O
ATOM 20 N1 G B 70 -32.502 23.029 -60.499 1.00 69.20 N
ATOM 21 C2 G B 70 -32.023 24.329 -60.468 1.00 70.14 C
ATOM 22 N2 G B 70 -32.894 25.334 -60.717 1.00 70.15 N
ATOM 23 N3 G B 70 -30.756 24.644 -60.210 1.00 70.13 N
ATOM 24 C4 G B 70 -29.983 23.559 -59.998 1.00 70.42 C
ATOM 25 P A B 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 26 OP1 A B 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 27 OP2 A B 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 28 O5' A B 71 -27.011 29.353 -57.128 1.00 79.40 O
TER
ATOM 2 P A A 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 3 OP1 A A 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 4 OP2 A A 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 5 O5' A A 102 -37.894 28.676 -62.501 1.00 75.80 O
ATOM 6 C5' A A 102 -38.691 29.819 -62.142 1.00 79.65 C
ATOM 7 C4' A A 102 -37.798 30.858 -61.524 1.00 80.50 C
ATOM 8 O4' A A 102 -37.077 30.187 -60.476 1.00 77.97 O
ATOM 9 C3' A A 102 -36.653 31.264 -62.432 1.00 81.54 C
ATOM 10 O3' A A 102 -37.055 32.219 -63.389 1.00 85.60 O
ATOM 11 C2' A A 102 -35.594 31.772 -61.468 1.00 79.20 C
ATOM 12 O2' A A 102 -35.809 33.101 -61.071 1.00 83.03 O
ATOM 13 C1' A A 102 -35.821 30.832 -60.294 1.00 75.27 C
ATOM 14 N9 A A 102 -34.778 29.823 -60.213 1.00 71.77 N
ATOM 15 C8 A A 102 -34.780 28.591 -60.792 1.00 70.49 C
ATOM 16 N7 A A 102 -33.703 27.880 -60.547 1.00 69.13 N
ATOM 17 C5 A A 102 -32.955 28.714 -59.756 1.00 68.87 C
ATOM 18 C6 A A 102 -31.701 28.537 -59.180 1.00 68.30 C
ATOM 19 N6 A A 102 -31.018 27.416 -59.340 1.00 67.89 N
ATOM 20 N1 A A 102 -31.203 29.548 -58.444 1.00 69.71 N
ATOM 21 C2 A A 102 -31.938 30.672 -58.296 1.00 71.27 C
ATOM 22 N3 A A 102 -33.145 30.967 -58.792 1.00 71.62 N
ATOM 23 C4 A A 102 -33.594 29.923 -59.527 1.00 70.99 C
ATOM 24 P G A 103 -36.294 32.128 -64.785 1.00 88.35 P
ATOM 25 OP1 G A 103 -36.913 33.159 -65.666 1.00 91.64 O
ATOM 26 OP2 G A 103 -36.136 30.717 -65.270 1.00 84.96 O
ATOM 27 O5' G A 103 -34.857 32.594 -64.302 1.00 84.85 O
TER
ATOM 1 O3' C B 69 -23.898 21.193 -59.913 1.00 87.23 O
ATOM 2 P G B 70 -24.366 22.097 -58.678 1.00 84.16 P
ATOM 3 OP1 G B 70 -23.561 21.728 -57.474 1.00 84.99 O
ATOM 4 OP2 G B 70 -25.845 22.011 -58.629 1.00 79.24 O
ATOM 5 O5' G B 70 -23.880 23.511 -59.283 1.00 82.40 O
ATOM 6 C5' G B 70 -24.212 24.764 -58.731 1.00 79.43 C
ATOM 7 C4' G B 70 -25.537 25.310 -59.223 1.00 76.16 C
ATOM 8 O4' G B 70 -26.403 24.309 -59.789 1.00 74.01 O
ATOM 9 C3' G B 70 -26.324 25.820 -58.047 1.00 75.22 C
ATOM 10 O3' G B 70 -25.851 27.182 -57.742 1.00 79.01 O
ATOM 11 C2' G B 70 -27.805 25.499 -58.336 1.00 72.43 C
ATOM 12 O2' G B 70 -28.612 26.615 -58.593 1.00 73.50 O
ATOM 13 C1' G B 70 -27.739 24.723 -59.629 1.00 71.82 C
ATOM 14 N9 G B 70 -28.631 23.563 -59.718 1.00 71.99 N
ATOM 15 C8 G B 70 -28.305 22.218 -59.584 1.00 73.07 C
ATOM 16 N7 G B 70 -29.309 21.387 -59.744 1.00 71.87 N
ATOM 17 C5 G B 70 -30.369 22.234 -60.010 1.00 70.27 C
ATOM 18 C6 G B 70 -31.706 21.910 -60.276 1.00 69.67 C
ATOM 19 O6 G B 70 -32.175 20.774 -60.303 1.00 71.89 O
ATOM 20 N1 G B 70 -32.502 23.029 -60.499 1.00 69.20 N
ATOM 21 C2 G B 70 -32.023 24.329 -60.468 1.00 70.14 C
ATOM 22 N2 G B 70 -32.894 25.334 -60.717 1.00 70.15 N
ATOM 23 N3 G B 70 -30.756 24.644 -60.210 1.00 70.13 N
ATOM 24 C4 G B 70 -29.983 23.559 -59.998 1.00 70.42 C
ATOM 25 P A B 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 26 OP1 A B 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 27 OP2 A B 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 28 O5' A B 71 -27.011 29.353 -57.128 1.00 79.40 O
TER
Atoms:
OP1: (-39.555,27.898,-64.202)
OP2: (-37.838,26.220,-63.301)
C3': (-36.653,31.264,-62.432)
C1': (-35.821,30.832,-60.294)
C5': (-38.691,29.819,-62.142)
O4': (-37.077,30.187,-60.476)
C8: (-34.780,28.591,-60.792)
O2': (-35.809,33.101,-61.071)
C6: (-31.701,28.537,-59.180)
C5: (-32.955,28.714,-59.756)
C4: (-33.594,29.923,-59.527)
P: (-38.693,27.423,-63.086)
C4': (-37.798,30.858,-61.524)
C2': (-35.594,31.772,-61.468)
C2: (-31.938,30.672,-58.296)
N1: (-31.203,29.548,-58.444)
N3: (-33.145,30.967,-58.792)
N6: (-31.018,27.416,-59.340)
N7: (-33.703,27.880,-60.547)
N9: (-34.778,29.823,-60.213)
O5': (-37.894,28.676,-62.501)
O3': (-37.055,32.219,-63.389)
OP2: (-37.838,26.220,-63.301)
C3': (-36.653,31.264,-62.432)
C1': (-35.821,30.832,-60.294)
C5': (-38.691,29.819,-62.142)
O4': (-37.077,30.187,-60.476)
C8: (-34.780,28.591,-60.792)
O2': (-35.809,33.101,-61.071)
C6: (-31.701,28.537,-59.180)
C5: (-32.955,28.714,-59.756)
C4: (-33.594,29.923,-59.527)
P: (-38.693,27.423,-63.086)
C4': (-37.798,30.858,-61.524)
C2': (-35.594,31.772,-61.468)
C2: (-31.938,30.672,-58.296)
N1: (-31.203,29.548,-58.444)
N3: (-33.145,30.967,-58.792)
N6: (-31.018,27.416,-59.340)
N7: (-33.703,27.880,-60.547)
N9: (-34.778,29.823,-60.213)
O5': (-37.894,28.676,-62.501)
O3': (-37.055,32.219,-63.389)
OP1: (-23.561,21.728,-57.474)
OP2: (-25.845,22.011,-58.629)
C3': (-26.324,25.820,-58.047)
C1': (-27.739,24.723,-59.629)
C5': (-24.212,24.764,-58.731)
O6: (-32.175,20.774,-60.303)
O4': (-26.403,24.309,-59.789)
C8: (-28.305,22.218,-59.584)
C2: (-32.023,24.329,-60.468)
C6: (-31.706,21.910,-60.276)
C5: (-30.369,22.234,-60.010)
C4: (-29.983,23.559,-59.998)
P: (-24.366,22.097,-58.678)
C4': (-25.537,25.310,-59.223)
C2': (-27.805,25.499,-58.336)
O2': (-28.612,26.615,-58.593)
N1: (-32.502,23.029,-60.499)
N2: (-32.894,25.334,-60.717)
N3: (-30.756,24.644,-60.210)
N7: (-29.309,21.387,-59.744)
N9: (-28.631,23.563,-59.718)
O5': (-23.880,23.511,-59.283)
O3': (-25.851,27.182,-57.742)
OP2: (-25.845,22.011,-58.629)
C3': (-26.324,25.820,-58.047)
C1': (-27.739,24.723,-59.629)
C5': (-24.212,24.764,-58.731)
O6: (-32.175,20.774,-60.303)
O4': (-26.403,24.309,-59.789)
C8: (-28.305,22.218,-59.584)
C2: (-32.023,24.329,-60.468)
C6: (-31.706,21.910,-60.276)
C5: (-30.369,22.234,-60.010)
C4: (-29.983,23.559,-59.998)
P: (-24.366,22.097,-58.678)
C4': (-25.537,25.310,-59.223)
C2': (-27.805,25.499,-58.336)
O2': (-28.612,26.615,-58.593)
N1: (-32.502,23.029,-60.499)
N2: (-32.894,25.334,-60.717)
N3: (-30.756,24.644,-60.210)
N7: (-29.309,21.387,-59.744)
N9: (-28.631,23.563,-59.718)
O5': (-23.880,23.511,-59.283)
O3': (-25.851,27.182,-57.742)
Image (generated by PyMOL):