Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1348:A1347
Extra
PDB:
ATOM 1 O3' U A1347 45.987 187.691 75.235 1.00 54.18 O
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' G B1346 48.739 191.470 79.136 1.00 54.08 O
ATOM 2 P U B1347 47.179 191.139 78.867 1.00 54.59 P
ATOM 3 OP1 U B1347 46.662 192.145 77.908 1.00 55.84 O
ATOM 4 OP2 U B1347 46.473 190.931 80.161 1.00 53.30 O
ATOM 5 O5' U B1347 47.249 189.776 78.061 1.00 54.53 O
ATOM 6 C5' U B1347 47.974 189.703 76.826 1.00 54.86 C
ATOM 7 C4' U B1347 48.051 188.267 76.363 1.00 55.92 C
ATOM 8 O4' U B1347 48.935 187.504 77.225 1.00 56.52 O
ATOM 9 C3' U B1347 46.743 187.488 76.403 1.00 54.96 C
ATOM 10 O3' U B1347 45.987 187.691 75.235 1.00 54.18 O
ATOM 11 C2' U B1347 47.227 186.058 76.410 1.00 55.47 C
ATOM 12 O2' U B1347 47.585 185.715 75.091 1.00 53.75 O
ATOM 13 C1' U B1347 48.456 186.170 77.320 1.00 56.03 C
ATOM 14 N1 U B1347 48.121 185.883 78.724 1.00 56.66 N
ATOM 15 C2 U B1347 48.235 184.582 79.133 1.00 57.01 C
ATOM 16 O2 U B1347 48.580 183.685 78.381 1.00 56.64 O
ATOM 17 N3 U B1347 47.931 184.357 80.455 1.00 57.51 N
ATOM 18 C4 U B1347 47.537 185.280 81.397 1.00 57.59 C
ATOM 19 O4 U B1347 47.473 184.941 82.586 1.00 56.90 O
ATOM 20 C5 U B1347 47.415 186.609 80.895 1.00 58.49 C
ATOM 21 C6 U B1347 47.705 186.862 79.608 1.00 57.97 C
ATOM 22 P G B1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 23 OP1 G B1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 24 OP2 G B1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 25 O5' G B1348 43.869 186.320 75.531 1.00 53.05 O
TER
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' G B1346 48.739 191.470 79.136 1.00 54.08 O
ATOM 2 P U B1347 47.179 191.139 78.867 1.00 54.59 P
ATOM 3 OP1 U B1347 46.662 192.145 77.908 1.00 55.84 O
ATOM 4 OP2 U B1347 46.473 190.931 80.161 1.00 53.30 O
ATOM 5 O5' U B1347 47.249 189.776 78.061 1.00 54.53 O
ATOM 6 C5' U B1347 47.974 189.703 76.826 1.00 54.86 C
ATOM 7 C4' U B1347 48.051 188.267 76.363 1.00 55.92 C
ATOM 8 O4' U B1347 48.935 187.504 77.225 1.00 56.52 O
ATOM 9 C3' U B1347 46.743 187.488 76.403 1.00 54.96 C
ATOM 10 O3' U B1347 45.987 187.691 75.235 1.00 54.18 O
ATOM 11 C2' U B1347 47.227 186.058 76.410 1.00 55.47 C
ATOM 12 O2' U B1347 47.585 185.715 75.091 1.00 53.75 O
ATOM 13 C1' U B1347 48.456 186.170 77.320 1.00 56.03 C
ATOM 14 N1 U B1347 48.121 185.883 78.724 1.00 56.66 N
ATOM 15 C2 U B1347 48.235 184.582 79.133 1.00 57.01 C
ATOM 16 O2 U B1347 48.580 183.685 78.381 1.00 56.64 O
ATOM 17 N3 U B1347 47.931 184.357 80.455 1.00 57.51 N
ATOM 18 C4 U B1347 47.537 185.280 81.397 1.00 57.59 C
ATOM 19 O4 U B1347 47.473 184.941 82.586 1.00 56.90 O
ATOM 20 C5 U B1347 47.415 186.609 80.895 1.00 58.49 C
ATOM 21 C6 U B1347 47.705 186.862 79.608 1.00 57.97 C
ATOM 22 P G B1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 23 OP1 G B1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 24 OP2 G B1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 25 O5' G B1348 43.869 186.320 75.531 1.00 53.05 O
TER
Atoms:
OP1: (44.013,188.301,73.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
C4: (47.537,185.280,81.397)
N3: (47.931,184.357,80.455)
OP1: (46.662,192.145,77.908)
OP2: (46.473,190.931,80.161)
C2: (48.235,184.582,79.133)
C1': (48.456,186.170,77.320)
C3': (46.743,187.488,76.403)
O5': (47.249,189.776,78.061)
O4': (48.935,187.504,77.225)
C5': (47.974,189.703,76.826)
P: (47.179,191.139,78.867)
C4': (48.051,188.267,76.363)
C2': (47.227,186.058,76.410)
O2': (47.585,185.715,75.091)
N1: (48.121,185.883,78.724)
O4: (47.473,184.941,82.586)
O2: (48.580,183.685,78.381)
C6: (47.705,186.862,79.608)
C5: (47.415,186.609,80.895)
O3': (45.987,187.691,75.235)
N3: (47.931,184.357,80.455)
OP1: (46.662,192.145,77.908)
OP2: (46.473,190.931,80.161)
C2: (48.235,184.582,79.133)
C1': (48.456,186.170,77.320)
C3': (46.743,187.488,76.403)
O5': (47.249,189.776,78.061)
O4': (48.935,187.504,77.225)
C5': (47.974,189.703,76.826)
P: (47.179,191.139,78.867)
C4': (48.051,188.267,76.363)
C2': (47.227,186.058,76.410)
O2': (47.585,185.715,75.091)
N1: (48.121,185.883,78.724)
O4: (47.473,184.941,82.586)
O2: (48.580,183.685,78.381)
C6: (47.705,186.862,79.608)
C5: (47.415,186.609,80.895)
O3': (45.987,187.691,75.235)
Image (generated by PyMOL):